Recombinant plant dsRNA-binding protein as an effective tool for the isolation of viral replicative form dsRNA and universal detection of RNA viruses

Springer Science and Business Media LLC - Tập 75 Số 2 - Trang 87-91 - 2009
Kappei Kobayashi1, Reiko Tomita1, Masaru Sakamoto1
1Iwate Biotechnology Research Center, Kitakami, Japan

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Aramburu J, Navas-Castillo J, Moreno P, Cambra M (1991) Detection of double-stranded RNA by ELISA and dot immunobinding assay using an antiserum to synthetic polynucleotides. J Virol Methods 33:1–11

Brigneti G, Martín-Hernández AM, Jin H, Chen J, Baulcombe DC, Baker B, Jones JDG (2004) Virus-induced gene silencing in Solanum species. Plant J 39:264–272

Chapman S, Kavanagh T, Baulcombe D (1992) Potato virus X as a vector for gene expression in plants. Plant J 2:549–557

Chaumpluk P, Sasaki Y, Nakajima N, Nagano H, Nakamura I, Suzuki K, Mise K, Inouye N, Okuno T, Furusawa I (1996) Six new subgroup I members of Japanese cucumber mosaic virus as determined by nucleotide sequence analysis on RNA3’s cDNAs. Ann Phytopathol Soc Jpn 62:40–44

Clark MF, Adams AN (1977) Characteristics of the microplate method of enzyme-linked immunosorbent assay for the detection of plant viruses. J Gen Virol 34:475–483

Dodds JA, Morris TJ, Jordan RL (1984) Plant viral double-stranded RNA. Annu Rev Phytopathol 22:151–168

Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) (2005) Virus taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses. Academic Press, New York

Hamada H, Tomita R, Iwadate Y, Kobayashi K, Munemura I, Takeuchi S, Hikichi Y, Suzuki K (2007) Cooperative effect of two amino acid mutations in the coat protein of Pepper mild mottle virus overcomes L 3 -mediated resistance in Capsicum plants. Virus Genes 34:205–214

Hiraguri A, Itoh R, Kondo N, Nomura Y, Aizawa D, Murai Y, Koiwa H, Seki M, Shinozaki K, Fukuhara T (2005) Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana. Plant Mol Biol 57:173–188

Jelkmann W, Martin RR, Maiss E (1989) Cloning of four plant viruses from small quantities of double-stranded RNA. Phytopathology 79:1250–1253

Kihara Y, Satho T, Eshita Y, Sakai K, Kotaki A, Takasaki T, Rongsriyam Y, Komalamisra N, Srisawat R, Lapcharoen P, Sumroiphon S, Iwanaga S, Ushijima H, Endoh D, Miyata T, Sakata A, Kashige N, Miake F, Fukushi S, Saijo M, Kurane I, Morikawa S, Mizutani T (2007) Rapid determination of viral RNA sequences in mosquitoes collected in the field. J Virol Methods 146:372–374

Lukács N (1994) Detection of virus infection in plants and differentiation between coexisting viruses by monoclonal antibodies to double-stranded RNA. J Virol Methods 47:255–272

Mizutani T (2007) Establishment of a system for determination of emerging infectious diseases (RDV method), and its application (in Japanese). Uirusu 57:217–225

Mizutani T, Endoh D, Okamoto M, Shirato K, Shimizu H, Arita M, Fukushi S, Saijo M, Sakai K, Lim CK, Ito M, Nerome R, Takasaki T, Ishii K, Suzuki T, Kurane I, Morikawa S, Nishimura H (2007) Rapid genome sequencing of RNA viruses. Emerg Infect Dis 13:322–324

Morris TJ, Dodds JA, Hillman B, Jordan RL, Lommel SA, Tamaki SJ (1983) Viral specific dsRNA: diagnostic value for plant virus disease identification. Plant Mol Biol Rep 1:27–30

Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, Hase T (2000) Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 28:e63

Saiki RK, Gelfand DH, Stoffel S, Scharf SJ, Higuchi R, Horn GT, Mullis KB, Erlich HA (1988) Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239:487–491

Sakai K, Mizutani T, Fukushi S, Saijo M, Endoh D, Kurane I, Takehara K, Morikawa S (2007) An improved procedure for rapid determination of viral RNA sequences of avian RNA viruses. Arch Virol 152:1763–1765

Schönborn J, Oberstraß J, Breyel E, Tittgen J, Schumacher J, Lukacs N (1991) Monoclonal antibodies to double-stranded RNA as probes of RNA structure in crude nucleic acid extracts. Nucleic Acids Res 19:2993–3000

Valverde RA, Nameth ST, Jordan RL (1990) Analysis of double-stranded RNA for plant virus diagnosis. Plant Dis 74:255–258

Watanabe S, Mizutani T, Sakai K, Kato K, Tohya Y, Fukushi S, Saijo M, Yoshikawa Y, Kurane I, Morikawa S, Akashi H (2008) Ligation-mediated amplification for effective rapid determination of viral RNA sequences (RDV). J Clin Virol 43:56–59

Zhang YP, Rowhani A (2000) A strategy for rapid cDNA coning from double-stranded RNA templates isolated from plants infected with RNA viruses by using Taq DNA polymerase. J Virol Methods 84:59–63