Recognition of polyunsaturated acyl chains by enzymes acting on membrane lipids
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McGee, 1998, Effective electrostatic charge of coagulation factor X in solution and on phospholipid membranes: implications for activation mechanisms and structure–function relationships of the Gla domain, Biochem. J., 330, 533, 10.1042/bj3300533
Mukhopadhyay, 1996, Interactions of annexin V with phospholipid monolayers, Biochim. Biophys. Acta, 1279, 58, 10.1016/0005-2736(95)00201-4
Lemmon, 2008, Membrane recognition by phospholipid-binding domains, Nat. Rev. Mol. Cell Biol., 9, 99, 10.1038/nrm2328
Bagatolli, 2010, An outlook on organization of lipids in membranes: searching for a realistic connection with the organization of biological membranes, Prog. Lipid Res., 49, 378, 10.1016/j.plipres.2010.05.001
Mouritsen, 1984, Mattress model of lipid–protein interactions in membranes, Biophys. J., 46, 141, 10.1016/S0006-3495(84)84007-2
Khan, 2010, Inscribing the perimeter of the PagP hydrocarbon ruler by site-specific chemical alkylation, Biochemistry, 49, 9046, 10.1021/bi1011496
Calder, 2010, Essential fats for future health, 64 Suppl 4, S1
Kiso, 2011, Pharmacology in health foods:effects of arachidonic acid and docosahexaenoic acid on the age-related decline in brain and cardiovascular system function, J. Pharmacol. Sci., 115, 471, 10.1254/jphs.10R39FM
Su, 2010, Mechanisms of n-3 fatty acid-mediated development and maintenance of learning memory performance, J. Nutr. Biochem., 21, 364, 10.1016/j.jnutbio.2009.11.003
Stables, 2011, Old and new generation lipid mediators in acute inflammation and resolution, Prog. Lipid Res., 50, 35, 10.1016/j.plipres.2010.07.005
Hicks, 2006, Unique molecular signatures of glycerophospholipid species in different rat tissues analyzed by tandem mass spectrometry, Biochim. Biophys. Acta, 1761, 1022, 10.1016/j.bbalip.2006.05.010
Milne, 2008, Dramatic differences in the roles in lipid metabolism of two isoforms of diacylglycerol kinase, Biochemistry, 47, 9372, 10.1021/bi800492c
Wassall, 2009, Polyunsaturated fatty acid–cholesterol interactions: domain formation in membranes, Biochim. Biophys. Acta, 1788, 24, 10.1016/j.bbamem.2008.10.011
Liu, 2010, Fatty acid binding proteins in brain development and disease, Int. J. Dev. Biol., 54, 1229, 10.1387/ijdb.092976rl
Ivanov, 2010, Molecular enzymology of lipoxygenases, Arch. Biochem. Biophys., 503, 161, 10.1016/j.abb.2010.08.016
May, 2000, The N-terminal beta-barrel structure of lipid body lipoxygenase mediates its binding to liposomes and lipid bodies, Eur. J. Biochem., 267, 1100, 10.1046/j.1432-1327.2000.01105.x
Walther, 2002, The N-terminal domain of the reticulocyte-type 15-lipoxygenase is not essential for enzymatic activity but contains determinants for membrane binding, J. Biol. Chem., 277, 27360, 10.1074/jbc.M203234200
Skrzypczak-Jankun, 2001, Three-dimensional structure of a purple lipoxygenase, J. Am. Chem. Soc., 123, 10814, 10.1021/ja011759t
Gardner, 1989, Soybean lipoxygenase-1 enzymically forms both (9S)- and (13S)-hydroperoxides from linoleic acid by a pH-dependent mechanism, Biochim. Biophys. Acta, 1001, 274, 10.1016/0005-2760(89)90111-2
Walther, 2001, Alterations of lipoxygenase specificity by targeted substrate modification and site-directed mutagenesis, Chem. Biol., 8, 779, 10.1016/S1074-5521(01)00050-3
Walther, 2009, Structural basis for pH-dependent alterations of reaction specificity of vertebrate lipoxygenase isoforms, Biochim. Biophys. Acta, 1791, 827, 10.1016/j.bbalip.2009.05.007
Hammarberg, 2000, The N-terminal domain of 5-lipoxygenase binds calcium and mediates calcium stimulation of enzyme activity, J. Biol. Chem., 275, 38787, 10.1074/jbc.M006136200
Chen, 2001, The N-terminal “beta-barrel” domain of 5-lipoxygenase is essential for nuclear membrane translocation, J. Biol. Chem., 276, 811, 10.1074/jbc.M008203200
Percival, 1992, Investigation of the mechanism of non-turnover-dependent inactivation of purified human 5-lipoxygenase. Inactivation by H2O2 and inhibition by metal ions, Eur, J. Biochem., 210, 109
Gilbert, 2011, The structure of human 5-lipoxygenase, Science, 331, 217, 10.1126/science.1197203
Carrasco, 2007, Diacylglycerol, when simplicity becomes complex, Trends Biochem. Sci., 32, 27, 10.1016/j.tibs.2006.11.004
Bunney, 2011, PLC regulation: emerging pictures for molecular mechanisms, Trends Biochem. Sci., 36, 88, 10.1016/j.tibs.2010.08.003
Schmolke, 2008, High-performance liquid chromatographic assay with ultraviolet spectrometric detection for the evaluation of inhibitors of phosphatidylinositol-specific phospholipase C, Anal. Biochem., 375, 291, 10.1016/j.ab.2007.12.022
Y.V. Shulga, M.K. Topham, and R.M. Epand, Regulation and Functions of Diacylglycerol Kinases, Chem. Rev. (in press), doi:10.1021/cr1004106.
Bunting, 1996, Molecular cloning and characterization of a novel human diacylglycerol kinase zeta, J. Biol. Chem., 271, 10230, 10.1074/jbc.271.17.10237
Walsh, 1994, Arachidonoyl-diacylglycerol kinase from bovine testis. Purification and properties, J. Biol. Chem., 269, 21155, 10.1016/S0021-9258(17)31943-9
Topham, 2009, Mammalian diacylglycerol kinases: molecular interactions and biological functions of selected isoforms, Biochim. Biophys. Acta, 1790, 416, 10.1016/j.bbagen.2009.01.010
Lung, 2009, Diacylglycerol kinase epsilon is selective for both acyl chains of phosphatidic acid or diacylglycerol, J. Biol. Chem., 284, 31062, 10.1074/jbc.M109.050617
Lin, 1991, Bovine brain microsomal CDP-diacylglycerol synthetase: solubilization and properties, Biochem. Int., 25, 299
Shulga, 2011, Study of arachidonoyl specificity in two enzymes of the PI cycle, J. Mol. Biol., 409, 101, 10.1016/j.jmb.2011.03.071
Ford, 1992, The primary determinant of rabbit myocardial ethanolamine phosphotransferase substrate selectivity is the covalent nature of the sn-1 aliphatic group of diradyl glycerol acceptors, J. Biol. Chem., 267, 11222, 10.1016/S0021-9258(19)49899-2
Kevala, 2001, Determination of substrate preference in phosphatidylserine decarboxylation by liquid chromatography-electrospray ionization mass spectrometry, Anal. Biochem., 292, 130, 10.1006/abio.2001.5076
Kim, 2004, Substrate preference in phosphatidylserine biosynthesis for docosahexaenoic acid containing species, Biochemistry, 43, 1030, 10.1021/bi035197x
Neau, 2007, Improving protein crystal quality by selective removal of a Ca(2+)-dependent membrane-insertion loop, Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun., 63, 972, 10.1107/S1744309107050993
Neau, 2009, The 1.85 A structure of an 8R-lipoxygenase suggests a general model for lipoxygenase product specificity, Biochemistry, 48, 7906, 10.1021/bi900084m
Dicu, 2007, Role of the hydrophobic segment of diacylglycerol kinase epsilon, Biochemistry, 46, 6109, 10.1021/bi6024726
Decaffmeyer, 2008, Determination of the topology of the hydrophobic segment of mammalian diacylglycerol kinase epsilon in a cell membrane and its relationship to predictions from modeling, J. Mol. Biol., 383, 797, 10.1016/j.jmb.2008.08.076
Norholm, 2011, Flanking residues help determine whether a hydrophobic segment adopts a monotopic or bitopic topology in the endoplasmic reticulum membrane, J. Biol. Chem., 286, 25284, 10.1074/jbc.M111.244616
Schneider, 2007, Control of oxygenation in lipoxygenase and cyclooxygenase catalysis, Chem. Biol., 14, 473, 10.1016/j.chembiol.2007.04.007
Poca, 1990, Lipoxygenases from Zea mays L. purification and physicochemical characteristics, Biochim. Biophys. Acta, 1045, 107, 10.1016/0005-2760(90)90138-N