Recent progress in mitochondrial DNA analysis

Horai, 1990, Intraspecific nucleotide sequence differences in the major noncoding region of human mitochondrial DNA, Am J Hum Genet, 46, 828

Horai, 1996, mtDNA polymorphism in East Asian populations with special reference to the peopling of Japan, Am J Hum Genet, 9, 579

Seo, 1998, Sequence polymorphism of mitochondrial DNA control region in Japanese, Forensic Sci Int, 155, 10.1016/S0379-0738(98)00153-4

Nishimaki, 1999, Sequence polymorphism in the mtDNA HV1 region in Japanese and Chinese, Legal Med, 1, 238, 10.1016/S1344-6223(99)80044-3

Imaizumi, 2002, A new database of mitochondrial DNA hypervariable regions I and II sequences from 162 Japanese individuals, Int J Legal Med, 116, 68, 10.1007/s004140100211

Koyama, 2002, Mitochondrial sequence haplotype in the Japanese population, Forensic Sci Int, 125, 93, 10.1016/S0379-0738(01)00611-9

Maruyama, 2003, Sequence polymorphisms of the mitochondrial DNA control region and phylogenetic analysis of mtDNA lineages in the Japanese populations, Int J Legal Med, 117, 218, 10.1007/s00414-003-0379-2

Qian, 2001, Mitochondrial DNA polymorphisms in Yunnan nationalities in China, J Hum Genet, 211, 10.1007/s100380170091

Yao, 2002, Genetic relationship of Chinese ethnic populations revealed by mtDNA sequence diversity, Am J Phys Anthropol, 118, 63, 10.1002/ajpa.10052

Rao, 2003, Sequence polymorphisms of the mitochondrial DNA control region in 105 Chinese Han population, J Forensic Sci, 48, 891, 10.1520/JFS2003040

Oota, 2002, Extreme mtDNA homogeneity in continental Asian populations, Am J Phys Anthropol, 118, 146, 10.1002/ajpa.10056

Lee, 1997, Sequence variation of mitochondrial DNA control region in Koreans, Forensic Sci Int, 87, 99, 10.1016/S0379-0738(97)02114-2

Ingman, 2000, Mitochondrial genome variation and the origin of modern humans, Nature, 408, 708, 10.1038/35047064

Maca-Meyer, 2001, Major genomic mitochondrial lineages delineate early human expansions, BioMed Central Genet, 2, 13

Finnilä, 2001, Phylogenetic network for European mtDNA, Am J Hum Genet, 68, 1475, 10.1086/320591

Herrnstadt, 2002, Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences for the major African, Asian, and European haplogroups, Am J Hum Genet, 70, 1152, 10.1086/339933

Mishmar, 2003, Natural selection shaped regional mtDNA variation in humans, Proc Natl Acad Sci USA, 100, 171, 10.1073/pnas.0136972100

Kong, 2003, Phylogeny of East Asian mitochondrial DNA lineages inferred from complete sequences, Am J Hum Genet, 73, 671, 10.1086/377718

Tanaka, 2004, Mitochondrial genome single nucleotide polymorphisms and their phenotypes in the Japanese, Ann NY Acad, 1011, 7, 10.1196/annals.1293.002

Coble, 2004, Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians, Int J Legal Med, 118, 137, 10.1007/s00414-004-0427-6

Torroni, 2000, mtDNA haplogroups and frequency patterns in Europe, Am J Hum Genet, 66, 1173, 10.1086/302789

Yao, 2002, Phylogeographic differentiation of mitochondrial DNA in Han Chinese, Am J Hum Genet, 70, 635, 10.1086/338999

Kivisild, 2003, The emerging limbs and twigs of the East Asian mtDNA tree, Mol Biol Evol, 19, 1737, 10.1093/oxfordjournals.molbev.a003996

Tanaka, 2004, Mitochondrial genome variation in eastern Asia and the peopling of Japan, Genome Res, 14, 1832, 10.1101/gr.2286304

Brandstätter, 2003, Rapid screening of mtDNA coding region SNPs for the identification of west European Caucasian haplogroups, Int J Legal Med, 117, 291, 10.1007/s00414-003-0395-2

Umetsu, 2001, Multiplex amplified product-length polymorphism analysis for rapid detection of human mitochondrial DNA variations, Electrophoresis, 22, 3533, 10.1002/1522-2683(200109)22:16<3533::AID-ELPS3533>3.0.CO;2-S

Umetsu K, Tanaka M, Yuasa I, Adachi N, Miyoshi A, Kashimura K, Park KS, Wei Y-H, Watanabe G, Osawa M. Improved multiplex amplified product-length polymorphism (APLP) analysis for rapid and detailed identification of East Asian mitochondrial DNA haplogroups. Electrophoresis 2005;26:91–8.

Yao, 2004, A call for mtDNA data quality control in forensic science, Forensic Sci Int, 14, 1, 10.1016/j.forsciint.2003.12.004

Allard, 2004, Control region sequences for East Asian individuals in the Scientific Working Group on DNA Analysis Methods forensic mtDNA data set, Legal Med, 11, 10.1016/j.legalmed.2003.08.004

Yao, 2003, Reconstructing the evolutionary history of China: a caveat about inferences drawn from ancient DNA, Mol Biol Evol, 20, 214, 10.1093/molbev/msg026

Adachi, 2004, Phylogenetic analysis of the human ancient mitochondrial DNA, J Archaeol Sci, 1339, 10.1016/j.jas.2004.02.011

Bandelt, 2001, Detecting errors in mtDNA data by phylogenetic analysis, Int J Legal Med, 115, 64, 10.1007/s004140100228

Forster, 1996, Origin and evolution of Native American mtDNA variation: a reappraisal, Am J Hum Genet, 59, 935

Forster, 2003, To error is human, Ann Hum Genet, 67, 2, 10.1046/j.1469-1809.2003.00002.x

Bandelt, 2004, Artificial recombination in forensic mtDNA population databases, Int J Legal Med, 118, 267, 10.1007/s00414-004-0455-2

Pusch, 2004, Spiking of contemporary human template DNA with ancient DNA extracts induces mutations under PCR and generates nonauthentic mitochondrial sequences, Mol Biol Evol, 21, 964, 10.1093/molbev/msh107

Serre, 2004, Mutations induced by ancient DNA extracts?, Mol Biol Evol, 21, 1463, 10.1093/molbev/msh139

Gilbert, 2003, Characterization of genetic miscoding lesions caused by postmortem damage, Am J Hum Genet, 72, 48, 10.1086/345379

Handt, 1996, The retrieval of ancient human DNA sequences, Am J Hum Genet, 59, 368

Bravi, 2004, A simple method for domestic animal identification in Argentina using PCR-RFLP analysis of cytochrome b gene, Legal Med, 6, 246, 10.1016/j.legalmed.2004.06.003

Ruiz-Pesini, 2004, Effects of purifying and adaptive selection on regional variation in human mtDNA, Science, 303, 223, 10.1126/science.1088434

Elson, 2004, Comparative genomics and the evolution of human mitochondrial DNA: assessing the effects of selection, Am J Hum Genet, 74, 229, 10.1086/381505