RecQ helicase acts before RuvABC, RecG and XerC proteins during recombination in recBCD sbcBC mutants of Escherichia coli
Tài liệu tham khảo
Anderson, 1997, The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in chi-regulated manner, Cell, 90, 77, 10.1016/S0092-8674(00)80315-3
Arnold, 2000, Facilitated loading of RecA protein is essential to recombination by RecBCD enzyme, J. Biol. Chem., 275, 12261, 10.1074/jbc.275.16.12261
Baba, 2006, Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection, Mol. Syst. Biol., 2, 10.1038/msb4100050
Bernstein, 2010, The RecQ DNA helicases in DNA repair, Annu. Rev. Genet., 44, 393, 10.1146/annurev-genet-102209-163602
Blattner, 1997, The complete genome sequence of Escherichia coli K-12, Science, 277, 1453, 10.1126/science.277.5331.1453
Buljubašić, 2012, RecF recombination pathway in Escherichia coli cells lacking RecQ, UvrD and HelD helicases, DNA Repair, 11, 419, 10.1016/j.dnarep.2012.01.011
Cox, 2007, Regulation of bacterial RecA protein function, Crit. Rev. Biochem. Mol. Biol., 42, 41, 10.1080/10409230701260258
Cromie, 2000, Control of crossing over, Mol. Cell, 6, 815, 10.1016/S1097-2765(05)00095-X
Daly, 2009, A new perspective on radiation resistance based on Deinococcus radiodurans, Nat. Rev. Microbiol., 7, 237, 10.1038/nrmicro2073
Datsenko, 2000, One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products, Proc. Natl. Acad. Sci. USA, 97, 6640, 10.1073/pnas.120163297
Dillingham, 2008, RecBCD enzyme and the repair of double-stranded DNA breaks, Microbiol. Mol. Biol. Rev., 72, 642, 10.1128/MMBR.00020-08
Fonville, 2010, RecQ-dependent death-by-recombination in cells lacking RecG and UvrD, DNA Repair, 9, 403, 10.1016/j.dnarep.2009.12.019
Friedberg, 2006
Handa, 2009, Reconstitution of initial steps of dsDNA break repair by the RecF pathway of E. coli, Genes Dev., 23, 1234, 10.1101/gad.1780709
Harmon, 1998, RecQ helicase, in concert with RecA and SSB proteins, initiates and disrupts DNA recombination, Genes Dev., 12, 1134, 10.1101/gad.12.8.1134
Hishida, 2004, Role of the Escherichia coli RecQ DNA helicase in SOS signaling and genome stabilization at stalled replication forks, Genes Dev., 18, 1886, 10.1101/gad.1223804
Ishioka, 1998, Abortive recombination in Escherichia coli ruv mutants blocks chromosome partitioning, Genes Cells, 3, 209, 10.1046/j.1365-2443.1998.00185.x
Ishioka, 1997, Roles of the recG gene product of Escherichia coli in recombination repair: effects of the ΔrecG mutation on cell division and chromosome partition, Genes Genet. Syst., 72, 91, 10.1266/ggs.72.91
Ivanković, 2012, DNA end resection controls the balance between homologous and illegitimate recombination in Escherichia coli, PLoS One, 7, e39030, 10.1371/journal.pone.0039030
Kowalczykowski, 1994, Biochemistry of homologous recombination in Escherichia coli, Microbiol. Rev., 58, 401, 10.1128/mr.58.3.401-465.1994
Kushner, 1971, Genetic recombination in Escherichia coli: the role of exonuclease I, Proc. Natl. Acad. Sci. USA, 68, 824, 10.1073/pnas.68.4.824
Lesterlin, 2004, Genetic recombination and the cell cycle: what we have learned from chromosome dimers, Mol. Microbiol., 54, 1151, 10.1111/j.1365-2958.2004.04356.x
Lloyd, 1991, Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG, J. Bacteriol., 173, 5414, 10.1128/jb.173.17.5414-5418.1991
Lloyd, 1985, Identification and genetic analysis of sbcC mutations in commonly used recBC sbcB strains of Escherichia coli K-12, J. Bacteriol., 164, 836, 10.1128/jb.164.2.836-844.1985
Lovett, 1989, Identification and purification of a single-stranded DNA-specific exonuclease encoded by the recJ gene of Escherichia coli, Proc. Natl. Acad. Sci. USA, 86, 2627, 10.1073/pnas.86.8.2627
Magner, 2007, RecQ promotes toxic recombination in cells lacking recombination intermediate-removal proteins, Mol. Cell, 26, 273, 10.1016/j.molcel.2007.03.012
Meddows, 2004, RecG helicase promotes DNA double-strand break repair, Mol. Microbiol., 52, 119, 10.1111/j.1365-2958.2003.03970.x
Mendonca, 1995, DNA helicases in recombination and repair: construction of a ΔuvrD ΔhelD ΔrecQ mutant deficient in recombination and repair, J. Bacteriol., 177, 1326, 10.1128/jb.177.5.1326-1335.1995
Miller, 1992
Mimitou, 2009, Nucleases and helicases take center stage in homologous recombination, Trends Biochem. Sci., 34, 264, 10.1016/j.tibs.2009.01.010
Morimatsu, 2003, RecFOR proteins load RecA protein onto gapped DNA to accelerate DNA strand exchange: a universal step of recombinational repair, Mol. Cell, 11, 1337, 10.1016/S1097-2765(03)00188-6
Nakayama, 1984, Isolation and genetic characterization of a thymineless death-resistant mutant of Escherichia coli K-12: identification of a new mutation (recQ1) that blocks the RecF recombination pathway, Mol. Gen. Genet., 195, 474, 10.1007/BF00341449
Rudolph, 2010, RecG protein and single-strand exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli, Genetics, 186, 473, 10.1534/genetics.110.120691
Rudolph, 2010, Is RecG a general guardian of the bacterial genome?, DNA Repair, 9, 210, 10.1016/j.dnarep.2009.12.014
Ryder, 1994, Mutation of recF, recJ, recO, or recR improves Hfr recombination in resolvase-deficient ruv recG strains of Escherichia coli, J. Bacteriol., 176, 1570, 10.1128/jb.176.6.1570-1577.1994
Seigneur, 1999, recD sbcB sbcD mutants are deficient in recombinational repair of UV lesions by RecBC, J. Bacteriol., 181, 6220, 10.1128/JB.181.19.6220-6221.1999
Sherratt, 2004, Recombination and chromosome segregation, Phil. Trans. R. Soc. Lond. B, 359, 61, 10.1098/rstb.2003.1365
Singh, 2012, RecQ helicases in double strand break repair and telomere maintenance, Mutat. Res., 736, 15, 10.1016/j.mrfmmm.2011.06.002
Spies, 2005, Homologous recombination by the RecBCD and RecF pathways, 389
Steiner, 1998, Sister chromatid exchange frequencies in Escherichia coli analyzed by recombination at the dif resolvase site, J. Bacteriol., 180, 6269, 10.1128/JB.180.23.6269-6275.1998
Thoms, 2008, Effects of single-strand DNases ExoI, RecJ, ExoVII, and SbcCD on homologous recombination of recBCD+ strains of Escherichia coli and roles of SbcB15 and XonA2 ExoI mutant enzymes, J. Bacteriol., 190, 179, 10.1128/JB.01052-07
Umezu, 1990, Escherichia coli RecQ protein is a DNA helicase, Proc. Natl. Acad. Sci. USA, 87, 5363, 10.1073/pnas.87.14.5363
West, 1997, Processing of recombination intermediates by the RuvABC proteins, Annu. Rev. Genet., 31, 213, 10.1146/annurev.genet.31.1.213
Wardrope, 2009, Resolution of joint molecules by RuvABC and RecG following cleavage of the Escherichia coli chromosome by EcoKI, PLoS One, 4, e6542, 10.1371/journal.pone.0006542
Wu, 2006, DNA helicases required for homologous recombination and repair of damaged replication forks, Annu. Rev. Genet., 40, 279, 10.1146/annurev.genet.40.110405.090636
Yeeles, 2010, The processing of double-stranded DNA breaks for recombinational repair by helicase-nuclease complexes, DNA Repair, 9, 276, 10.1016/j.dnarep.2009.12.016
Zahradka, 2006, sbcB15 and ΔsbcB mutations activate two types of RecF recombination pathways in Escherichia coli, J. Bacteriol., 188, 7562, 10.1128/JB.00613-06
Zahradka, 2009, Roles of ExoI and SbcCD nucleases in “reckless” DNA degradation in recA mutants of Escherichia coli, J. Bacteriol., 191, 1677, 10.1128/JB.01877-07