Rate and accuracy of bacterial protein synthesis revisited
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Ninio, 1974, A semi-quantitative treatment of missense and nonsense suppression in the strA and ram ribosomal mutants of Escherichia coli. Evaluation of some molecular parameters of translation in vivo, J Mol Biol, 84, 297, 10.1016/0022-2836(74)90586-5
Gorini, 1970, Informational suppression, Annu Rev Genet, 4, 107, 10.1146/annurev.ge.04.120170.000543
Pauling, 1957, The probability of errors in the process of synthesis of protein molecules
Loftfield, 1963, The frequency of errors in protein biosynthesis, Biochem J, 89, 82, 10.1042/bj0890082
Hopfield, 1974, Kinetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity, Proc Natl Acad Sci U S A, 71, 4135, 10.1073/pnas.71.10.4135
Ninio, 1975, Kinetic amplification of enzyme discrimination, Biochimie, 57, 587, 10.1016/S0300-9084(75)80139-8
Ehrenberg, 1980, Thermodynamic constraints on kinetic proofreading in biosynthetic pathways, Biophys J, 31, 333, 10.1016/S0006-3495(80)85063-6
Thompson, 1977, Proofreading of the codon–anticodon interaction on ribosomes, Proc Natl Acad Sci U S A, 74, 198, 10.1073/pnas.74.1.198
Ruusala, 1982, Is there proofreading during polypeptide synthesis?, EMBO J, 1, 741, 10.1002/j.1460-2075.1982.tb01240.x
Gromadski, 2004, Kinetic determinants of high-fidelity tRNA discrimination on the ribosome, Mol Cell, 13, 191, 10.1016/S1097-2765(04)00005-X
Valle, 2003, Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy, Nat Struct Biol, 10, 899, 10.1038/nsb1003
Yarus, 2003, A twisted tRNA intermediate sets the threshold for decoding, RNA, 9, 384, 10.1261/rna.2184703
Ogle, 2002, Selection of tRNA by the ribosome requires a transition from an open to a closed form, Cell, 111, 721, 10.1016/S0092-8674(02)01086-3
Ogle, 2001, Recognition of cognate transfer RNA by the 30S ribosomal subunit, Science, 292, 897, 10.1126/science.1060612
Lovmar, 2006, Rate, accuracy and cost of ribosomes in bacterial cells, Biochimie, 88, 951, 10.1016/j.biochi.2006.04.019
Blanchard, 2004, tRNA selection and kinetic proofreading in translation, Nat Struct Mol Biol, 11, 1008, 10.1038/nsmb831
Lee, 2007, The role of fluctuations in tRNA selection by the ribosome, Proc Natl Acad Sci U S A, 104, 13661, 10.1073/pnas.0705988104
Fersht, 1999
Rodnina, 2005, Recognition and selection of tRNA in translation, FEBS Lett, 579, 938, 10.1016/j.febslet.2004.11.048
Ogle, 2005, Structural insights into translational fidelity, Annu Rev Biochem, 74, 129, 10.1146/annurev.biochem.74.061903.155440
Liang, 2000, mRNA composition and control of bacterial gene expression, J Bacteriol, 182, 3037, 10.1128/JB.182.11.3037-3044.2000
Gromadski, 2006, A uniform response to mismatches in codon–anticodon complexes ensures ribosomal fidelity, Mol Cell, 21, 369, 10.1016/j.molcel.2005.12.018
Bremer, 1987, Modulation of chemical composition and other parameters of the cell by growth rate, vol 2, 1553
Ehrenberg, 1984, Costs of accuracy determined by a maximal growth rate constraint, Q Rev Biophys, 17, 45, 10.1017/S0033583500005254
Tubulekas, 1993, Suppression of rpsL phenotypes by tuf mutations reveals a unique relationship between translation elongation and growth rate, Mol Microbiol, 7, 275, 10.1111/j.1365-2958.1993.tb01118.x
Parker, 1989, Errors and alternatives in reading the universal genetic code, Microbiol Rev, 53, 273, 10.1128/MMBR.53.3.273-298.1989
Kramer, 2007, The frequency of translational misreading errors in E. coli is largely determined by tRNA competition, RNA, 13, 87, 10.1261/rna.294907