RIPK1 Mediates TNF-Induced Intestinal Crypt Apoptosis During Chronic NF-κB Activation
Tài liệu tham khảo
Abraham, 2009, Inflammatory bowel disease, N Engl J Med, 361, 2066, 10.1056/NEJMra0804647
Gunther, 2013, Apoptosis, necrosis and necroptosis: cell death regulation in the intestinal epithelium, Gut, 62, 1062, 10.1136/gutjnl-2011-301364
Khor, 2011, Genetics and pathogenesis of inflammatory bowel disease, Nature, 474, 307, 10.1038/nature10209
Okamoto, 2016, Role of epithelial cells in the pathogenesis and treatment of inflammatory bowel disease, J Gastroenterol, 51, 11, 10.1007/s00535-015-1098-4
Neurath, 2012, Mucosal healing in inflammatory bowel diseases: a systematic review, Gut, 61, 1619, 10.1136/gutjnl-2012-302830
Vereecke, 2009, The ubiquitin-editing enzyme A20 (TNFAIP3) is a central regulator of immunopathology, Trends Immunol, 30, 383, 10.1016/j.it.2009.05.007
Kaser, 2010, Inflammatory bowel disease, Ann Rev Immunol, 28, 573, 10.1146/annurev-immunol-030409-101225
Zeissig, 2004, Downregulation of epithelial apoptosis and barrier repair in active Crohn's disease by tumour necrosis factor alpha antibody treatment, Gut, 53, 1295, 10.1136/gut.2003.036632
Lin, 2003, NF-kappaB in cancer: a marked target, Semin Cancer Biol, 13, 107, 10.1016/S1044-579X(02)00128-1
Egan, 2004, IkappaB-kinasebeta-dependent NF-kappaB activation provides radioprotection to the intestinal epithelium, Proc Natl Acad Sci U S A, 101, 2452, 10.1073/pnas.0306734101
Chen, 2003, The two faces of IKK and NF-kappaB inhibition: prevention of systemic inflammation but increased local injury following intestinal ischemia-reperfusion, Nat Med, 9, 575, 10.1038/nm849
Nenci, 2007, Epithelial NEMO links innate immunity to chronic intestinal inflammation, Nature, 446, 557, 10.1038/nature05698
Garcia-Carbonell, 2018, Elevated A20 promotes TNF-induced and RIPK1-dependent intestinal epithelial cell death, Proc Natl Acad Sci U S A, 115, E9192, 10.1073/pnas.1810584115
Guma, 2011, Constitutive intestinal NF-kappaB does not trigger destructive inflammation unless accompanied by MAPK activation, J Exp Med, 208, 1889, 10.1084/jem.20110242
Pasparakis, 2015, Necroptosis and its role in inflammation, Nature, 517, 311, 10.1038/nature14191
Weinlich, 2014, The two faces of receptor interacting protein kinase-1, Mol Cell, 56, 469, 10.1016/j.molcel.2014.11.001
Wang, 2008, TNF-alpha induces two distinct caspase-8 activation pathways, Cell, 133, 693, 10.1016/j.cell.2008.03.036
Kanayama, 2004, TAB2 and TAB3 activate the NF-kappaB pathway through binding to polyubiquitin chains, Mol Cell, 15, 535, 10.1016/j.molcel.2004.08.008
Micheau, 2002, The long form of FLIP is an activator of caspase-8 at the Fas death-inducing signaling complex, J Biol Chem, 277, 45162, 10.1074/jbc.M206882200
Feng, 2007, A novel inhibitory mechanism of mitochondrion-dependent apoptosis by a herpesviral protein, PLoS Pathog, 3, e174, 10.1371/journal.ppat.0030174
O'Donnell, 2011, Caspase 8 inhibits programmed necrosis by processing CYLD, Nat Cell Biol, 13, 1437, 10.1038/ncb2362
Rogler, 1998, Nuclear factor kappaB is activated in macrophages and epithelial cells of inflamed intestinal mucosa, Gastroenterology, 115, 357, 10.1016/S0016-5085(98)70202-1
Leal, 2015, Identification of inflammatory mediators in patients with Crohn's disease unresponsive to anti-TNFalpha therapy, Gut, 64, 233, 10.1136/gutjnl-2013-306518
Sato, 2009, Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche, Nature, 459, 262, 10.1038/nature07935
Kreuz, 2001, NF-kappaB inducers upregulate cFLIP, a cycloheximide-sensitive inhibitor of death receptor signaling, Mol Cell Biol, 21, 3964, 10.1128/MCB.21.12.3964-3973.2001
Kawakami, 2005, Transcriptional activation of survivin through the NF-kappaB pathway by human T-cell leukemia virus type I tax, Int J Cancer, 115, 967, 10.1002/ijc.20954
Ofengeim, 2013, Regulation of RIP1 kinase signalling at the crossroads of inflammation and cell death, Nat Rev Cell Biol, 14, 727, 10.1038/nrm3683
Degterev, 2008, Identification of RIP1 kinase as a specific cellular target of necrostatins, Nat Chem Biol, 4, 313, 10.1038/nchembio.83
Takahashi, 2012, Necrostatin-1 analogues: critical issues on the specificity, activity and in vivo use in experimental disease models, Cell Death Dis, 3, e437, 10.1038/cddis.2012.176
Mandal, 2014, RIP3 induces apoptosis independent of pronecrotic kinase activity, Mol Cell, 56, 481, 10.1016/j.molcel.2014.10.021
Berger, 2015, Characterization of GSK’963: a structurally distinct, potent and selective inhibitor of RIP1 kinase, Cell Death Discov, 1, 10.1038/cddiscovery.2015.9
Polykratis, 2014, Cutting edge: RIPK1 Kinase inactive mice are viable and protected from TNF-induced necroptosis in vivo, J Immunol, 193, 1539, 10.4049/jimmunol.1400590
Newton, 2004, Kinase RIP3 is dispensable for normal NF-kappa Bs, signaling by the B-cell and T-cell receptors, tumor necrosis factor receptor 1, and Toll-like receptors 2 and 4, Mol Cell Biol, 24, 1464, 10.1128/MCB.24.4.1464-1469.2004
Zhang, 2009, RIP3, an energy metabolism regulator that switches TNF-induced cell death from apoptosis to necrosis, Science, 325, 332, 10.1126/science.1172308
Vandenabeele, 2010, The role of the kinases RIP1 and RIP3 in TNF-induced necrosis, Sci Signal, 3, re4, 10.1126/scisignal.3115re4
Vanden Berghe, 2014, Regulated necrosis: the expanding network of non-apoptotic cell death pathways, Nat Rev Mol Cell Biol, 15, 135, 10.1038/nrm3737
Kim, 2007, TNF-induced activation of the Nox1 NADPH oxidase and its role in the induction of necrotic cell death, Mol Cell, 26, 675, 10.1016/j.molcel.2007.04.021
Shindo, 2013, Critical contribution of oxidative stress to TNFalpha-induced necroptosis downstream of RIPK1 activation, Biochem Biophys Res Commun, 436, 212, 10.1016/j.bbrc.2013.05.075
Zhang, 2017, RIP1 autophosphorylation is promoted by mitochondrial ROS and is essential for RIP3 recruitment into necrosome, Nat Commun, 8, 14329, 10.1038/ncomms14329
Matsuzawa-Ishimoto, 2017, Autophagy protein ATG16L1 prevents necroptosis in the intestinal epithelium, J Exp Med, 214, 3687, 10.1084/jem.20170558
Pott, 2018, Intestinal epithelial cell autophagy is required to protect against TNF-induced apoptosis during chronic colitis in mice, Cell Host Microbe, 23, 191, 10.1016/j.chom.2017.12.017
Aden, 2018, ATG16L1 orchestrates interleukin-22 signaling in the intestinal epithelium via cGAS-STING, J Exp Med, 215, 2868, 10.1084/jem.20171029
Anderson, 2011, Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47, Nat Genet, 43, 246, 10.1038/ng.764
Franke, 2010, Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci, Nat Genet, 42, 1118, 10.1038/ng.717
Liu, 2015, Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations, Nat Genet, 47, 979, 10.1038/ng.3359
Greten, 2004, IKKbeta links inflammation and tumorigenesis in a mouse model of colitis-associated cancer, Cell, 118, 285, 10.1016/j.cell.2004.07.013
Pereira, 2015, Oxidative stress and DNA damage: implications in inflammatory bowel disease, Inflamm Bowel Dis, 21, 2403
Shaked, 2012, Chronic epithelial NF-kappaB activation accelerates APC loss and intestinal tumor initiation through iNOS up-regulation, Proc Natl Acad Sci U S A, 109, 14007, 10.1073/pnas.1211509109
Lakatos, 2008, Risk for colorectal cancer in ulcerative colitis: changes, causes and management strategies, World J Gastroenterol, 14, 3937, 10.3748/wjg.14.3937
Abraham, 2016, Cancer surveillance in ulcerative colitis and Crohn's disease: new strategies, Curr Opin Gastroenterol, 32, 32, 10.1097/MOG.0000000000000234
Brain, 2010, NOD2-mediated autophagy and Crohn disease, Autophagy, 6, 412, 10.4161/auto.6.3.11389
Newton, 2014, Activity of protein kinase RIPK3 determines whether cells die by necroptosis or apoptosis, Science, 343, 1357, 10.1126/science.1249361
Rott, 1991, Tuberous sclerosis in two sibs of normal parents, Clin Genet, 39, 306, 10.1111/j.1399-0004.1991.tb03031.x
Dobin, 2013, STAR: ultrafast universal RNA-seq aligner, Bioinformatics, 29, 15, 10.1093/bioinformatics/bts635
Li, 2011, RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome, BMC Bioinformatics, 12, 323, 10.1186/1471-2105-12-323
Anders, 2010, Differential expression analysis for sequence count data, Genome Biol, 11, R106, 10.1186/gb-2010-11-10-r106
Delhase, 1999, Positive and negative regulation of IkappaB kinase activity through IKKbeta subunit phosphorylation, Science, 284, 309, 10.1126/science.284.5412.309
Wertz, 2004, De-ubiquitination and ubiquitin ligase domains of A20 downregulate NF-kappaB signalling, Nature, 430, 694, 10.1038/nature02794
Lu, 2013, Dimerization and ubiquitin mediated recruitment of A20, a complex deubiquitinating enzyme, Immunity, 38, 896, 10.1016/j.immuni.2013.03.008
Meerbrey, 2011, The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo, Proc Natl Acad Sci U S A, 108, 3665, 10.1073/pnas.1019736108
Koo, 2012, Controlled gene expression in primary Lgr5 organoid cultures, Nat Methods, 9, 81, 10.1038/nmeth.1802
