Quantitative analysis of anionic metabolites for Catharanthus roseus by capillary electrophoresis using sulfonated capillary coupled with electrospray ionization-tandem mass spectrometry

Journal of Bioscience and Bioengineering - Tập 105 - Trang 249-260 - 2008
Kazuo Harada1, Yohko Ohyama1, Tetsuya Tabushi1, Akio Kobayashi1, Eiichiro Fukusaki1
1Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan

Tài liệu tham khảo

Stitt, 2003, From measurements of metabolites to metabolomics: an ‘on the fly’ perspective illustrated by recent studies of carbon-nitrogen interactions, Curr. Opin. Biotechnol., 14, 136, 10.1016/S0958-1669(03)00023-5 Weckwerth, 2003, Metabolomics in systems biology, Annu. Rev. Plant Biol., 54, 669, 10.1146/annurev.arplant.54.031902.135014 Trethewey, 2004, Metabolite profiling as an aid to metabolic engineering in plants, Curr. Opin. Plant Biol., 7, 196, 10.1016/j.pbi.2003.12.003 Fukusaki, 2005, Plant metabolomics: potential for practical operation, J. Biosci. Bioeng., 100, 347, 10.1263/jbb.100.347 Dixon, 2006, Applications of metabolomics in agriculture, J. Agric. Food Chem., 54, 8984, 10.1021/jf061218t Schauer, 2006, Plant metabolomics: towards biological function and mechanism, Trends Plant Sci., 11, 508, 10.1016/j.tplants.2006.08.007 Roessner, 2001, Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems, Plant Cell, 13, 11, 10.1105/tpc.13.1.11 Taylor, 2002, Application of metabolomics to plant genotype discrimination using statistics and machine learning, Bioinformatics, 18, S241, 10.1093/bioinformatics/18.suppl_2.S241 Hirai, 2004, Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana, Proc. Natl. Acad. Sci. USA, 101, 10205, 10.1073/pnas.0403218101 Soga, 2006, Differential metabolomics reveals ophthalmic acid as an oxidative stress biomarker indicating hepatic glutathione consumption, J. Biol. Chem., 281, 16768, 10.1074/jbc.M601876200 Roessner, 2000, Technical advance: simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry, Plant J., 23, 131, 10.1046/j.1365-313x.2000.00774.x Fiehn, 2000, Metabolite profiling for plant functional genomics, Nat. Biotechnol., 18, 1157, 10.1038/81137 Bailey, 2000, Mass spectrometrically detected directly coupled high performance liquid chromatography/nuclear magnetic resonance spectroscopy/mass spectrometry for the identification of xenobiotic metabolites in maize plants, Rapid. Commun. Mass Spectrom., 14, 679, 10.1002/(SICI)1097-0231(20000430)14:8<679::AID-RCM936>3.0.CO;2-V Huhman, 2002, Metabolic profiling of saponins in Medicago sativa and Medicago truncatula using HPLC coupled to an electrospray ion-trap mass spectrometer, Phytochemistry, 59, 347, 10.1016/S0031-9422(01)00432-0 Tolstikov, 2003, Monolithic silica-based capillary reversed-phase liquid chromatography/electrospray mass spectrometry for plant metabolomics, Anal. Chem., 75, 6737, 10.1021/ac034716z Wilson, 2005, High resolution “ultra performance” liquid chromatography coupled to oa-TOF mass spectrometry as a tool for differential metabolic pathway profiling in functional genomic studies, J. Proteome Res., 4, 591, 10.1021/pr049769r Aharoni, 2002, Nontargeted metabolome analysis by use of Fourier transform ion cyclotron mass spectrometry, Omics, 6, 217, 10.1089/15362310260256882 Brown, 2005, Metabolomics applications of FT-ICR mass spectrometry, Mass Spectrom. Rev., 24, 223, 10.1002/mas.20011 Bligny, 2001, NMR and plant metabolism, Curr. Opin. Plant Biol., 4, 191, 10.1016/S1369-5266(00)00160-6 Ward, 2007, Recent applications of NMR spectroscopy in plant metabolomics, FEBS J., 274, 1126, 10.1111/j.1742-4658.2007.05675.x van Dam, 2002, Analysis of glycolytic intermediates in Saccharomyces cerevisiae using anion exchange chromatography and electrospray ionization with tandem mass spectrometric detection, Anal. Chim. Acta, 460, 209, 10.1016/S0003-2670(02)00240-4 Sekiguchi, 2005, Development of a comprehensive analytical method for phosphate metabolites in plants by ion chromatography coupled with tandem mass spectrometry, J. Chromatogr. A, 1085, 131, 10.1016/j.chroma.2005.01.098 Luo, 2007, Simultaneous determination of multiple intracellular metabolites in glycolysis, pentose phosphate pathway and tricarboxylic acid cycle by liquid chromatography-mass spectrometry, J. Chromatogr. A, 1147, 153, 10.1016/j.chroma.2007.02.034 Katayama, 1998, Stable cationic capillary coating with successive multiple ionic polymer layers for capillary electrophoresis, Anal. Chem., 70, 5272, 10.1021/ac980522l Soga, 2002, Simultaneous determination of anionic intermediates for Bacillus subtilis metabolic pathways by capillary electrophoresis electrospray ionization mass spectrometry, Anal. Chem., 74, 2233, 10.1021/ac020064n Soga, 2002, Pressure-assisted capillary electrophoresis electrospray ionization mass spectrometry for analysis of multivalent anions, Anal. Chem., 74, 6224, 10.1021/ac0202684 Soga, 2003, Quantitative metabolome analysis using capillary electrophoresis mass spectrometry, J. Proteome Res., 2, 488, 10.1021/pr034020m Sato, 2004, Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection, Plant J., 40, 151, 10.1111/j.1365-313X.2004.02187.x Sawada, 2004, Capillary electrophoresis-electrospray ionization mass spectrometry using uncoated fused-silica capillaries and alkaline buffer solution for the analysis of small carboxylic acids, Anal. Chim. Acta, 507, 191, 10.1016/j.aca.2003.11.047 Harada, 2006, Pressure-assisted capillary electrophoresis mass spectrometry using combination of polarity reversion and electroosmotic flow for metabolomics anion analysis, J. Biosci. Bioeng., 101, 403, 10.1263/jbb.101.403 Kodama, 2005, A sulfonated capillary that gives reproducible migration times for capillary zone electrophoresis and micellar electrokinetic chromatography, Electrophoresis, 26, 4070, 10.1002/elps.200500445 Ohnesorge, 2005, Quantitation in capillary electrophoresis-mass spectrometry, Electrophoresis, 26, 3973, 10.1002/elps.200500398 van Der Heijden, 2004, The Catharanthus alkaloids: pharmacognosy and biotechnology, Curr. Med. Chem., 11, 607, 10.2174/0929867043455846 Pasquali, 2006, Metabolic engineering of cell cultures versus whole plant complexity in production of bioactive monoterpene indole alkaloids: recent progress related to old dilemma, J. Biosci. Bioeng., 101, 287, 10.1263/jbb.101.287 Hughes, 2002, Metabolic engineering of plants for alkaloid production, Metab. Eng., 4, 41, 10.1006/mben.2001.0205 Verpoorte, 2002, Engineering secondary metabolite production in plants, Curr. Opin. Biotechnol., 13, 181, 10.1016/S0958-1669(02)00308-7 Murashige, 1962, Revised medium for rapid growth and bioassays with tobacco tissue cultures, Physiol. Plant., 15, 473, 10.1111/j.1399-3054.1962.tb08052.x Bolten, 2007, Sampling for metabolome analysis of microorganisms, Anal. Chem., 79, 3843, 10.1021/ac0623888 van der Fits, 2000, ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism, Science, 289, 295, 10.1126/science.289.5477.295