QIIME allows analysis of high-throughput community sequencing data

Nature Methods - Tập 7 Số 5 - Trang 335-336 - 2010
J. Gregory Caporaso1, Justin Kuczynski2, Jesse Stombaugh1, Kyle Bittinger3, Frederic D. Bushman3, Elizabeth K. Costello1, Noah Fierer4, Antonio González Peña5, Julia K. Goodrich5, Jeffrey I. Gordon6, Gavin Huttley7, Scott T. Kelley8, Dan Knights5, Jeremy E. Koenig9, Ruth E. Ley9, Catherine Lozupone1, Daniel McDonald1, Brian D. Muegge6, Meg Pirrung1, Jens Reeder1, Joel Sevinsky10, Peter J. Turnbaugh6, William A. Walters2, Jeremy Widmann1, Tanya Yatsunenko6, Jesse Zaneveld2, Rob Knight1,11
1Department of Chemistry and Biochemistry, University of Colorado, Boulder, USA
2Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, USA
3Department of Microbiology, University of Pennsylvania, Philadelphia, USA
4Cooperative Institute for Research in Environmental Sciences and Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, USA
5Department of Computer Science, University of Colorado, Boulder, USA
6Center for Genome Sciences, Washington University School of Medicine, St. Louis, USA
7Computational Genomics Laboratory, John Curtin School of Medical Research, The Australian National University, Canberra, Australian Capital Territory, Australia.,
8Department of Biology, San Diego State University, San Diego, USA
9Department of Microbiology, Cornell University, Ithaca, USA
10Luca Technologies, Golden, USA
11Howard Hughes Medical Institute, Boulder, USA

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Từ khóa


Tài liệu tham khảo

National Institutes of Health Human Microbiome Project Working Group et al. Genome Res. 19, 2317–2323 (2009).

Hopkin, M. Nature 444, 420–421 (2006).

Hamady, M., Walker, J.J., Harris, J.K., Gold, N.J. & Knight, R. Nat. Methods 5, 235–237 (2008).

Cole, J.R. et al. Nucleic Acids Res. 37, D141–D145 (2009).

Schloss, P.D. et al. Appl. Environ. Microbiol. 75, 7537–7541 (2009).

Knight, R. et al. Genome Biol. 8, R171 (2007).

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Nature Methods

Tập 7 Số 5

335-336

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