Proteomic analysis at the subcellular level for host targets against influenza A virus (H1N1)

Baas, 2006, Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics, J. Virol., 80, 10813, 10.1128/JVI.00851-06 Bridges, 2003, Transmission of influenza: implications for control in health care settings, Clin. Infect. Dis., 37, 1094, 10.1086/378292 Chen, 2009, Influenza virus antigenic variation, host antibody production and new approach to control epidemics, Virol. J., 6, 30, 10.1186/1743-422X-6-30 Cohen, 2009, Swine flue outbreak. Flu researchers train sights on novel tricks of novel H1N1, Science, 324, 870, 10.1126/science.324_870 Doran, 1983, Isolation of PGP 9.5, a new human neurone-specific protein detected by high-resolution two-dimensional electrophoresis, J. Neurochem., 40, 1542, 10.1111/j.1471-4159.1983.tb08124.x Duan, 2008, In vitro and in vivo protection against the highly pathogenic H5N1 influenza virus by an antisense phosphorothioate oligonucleotide, Antivir. Ther., 13, 109, 10.1177/135965350801300112 Ehrhardt, 2009, A new player in a deadly game: influenza viruses and the PI3K/Akt signalling pathway, Cell. Microbiol., 11, 863, 10.1111/j.1462-5822.2009.01309.x Ehrhardt, 2007, Influenza A virus NS1 protein activates the PI3K/Akt pathway to mediate antiapoptotic signaling responses, J. Virol., 81, 3058, 10.1128/JVI.02082-06 Gao, 2008, Proteasome inhibition attenuates coxsackievirus-induced myocardial damage in mice, Am. J. Physiol. Heart Circ. Physiol., 295, H401, 10.1152/ajpheart.00292.2008 Gubareva, 2002, Detection of influenza virus resistance to neuraminidase inhibitors by an enzyme inhibition assay, Antiviral Res., 53, 47, 10.1016/S0166-3542(01)00192-9 He, 2010, Influenza A virus replication induces cell cycle arrest in G0/G1 phase, J. Virol., 84, 12832, 10.1128/JVI.01216-10 Hsiang, 2009, Interferon-induced ISG15 conjugation inhibits influenza A virus gene expression and replication in human cells, J. Virol., 83, 5971, 10.1128/JVI.01667-08 Kislinger, 2006, Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling, Cell, 125, 173, 10.1016/j.cell.2006.01.044 Li, 2009, Seasonal influenza: an overview, J. Sch. Nurs., 25, 4S, 10.1177/1059840508330066 Lim, 2003, Identification of 2D-gel proteins: a comparison of MALDI/TOF peptide mass mapping to mu LC-ESI tandem mass spectrometry, J. Am. Soc. Mass Spectrom., 14, 957, 10.1016/S1044-0305(03)00144-2 Lin, 2009, Proteomic analysis of ionizing radiation-induced proteins at the subcellular level, J. Proteome Res., 8, 390, 10.1021/pr800699w Liu, 2008, Proteomics analysis of differential expression of cellular proteins in response to avian H9N2 virus infection in human cells, Proteomics, 8, 1851, 10.1002/pmic.200700757 Mazur, 2007, Acetylsalicylic acid (ASA) blocks influenza virus propagation via its NF-kappaB-inhibiting activity, Cell. Microbiol., 9, 1683, 10.1111/j.1462-5822.2007.00902.x Miller, 2008, Macrophage migration inhibitory factor stimulates AMP-activated protein kinase in the ischaemic heart, Nature, 451, 578, 10.1038/nature06504 Morens, 2007, The 1918 influenza pandemic: insights for the 21st century, J. Infect. Dis., 195, 1018, 10.1086/511989 Morrissey, 2006, A proteomics approach to survey the antigenicity of the influenza virus by mass spectrometry, Proteomics, 6, 2034, 10.1002/pmic.200500642 Narasimhan, 1996, Conjugation of the 15-kDa interferon-induced ubiquitin homolog is distinct from that of ubiquitin, J. Biol. Chem., 271, 324, 10.1074/jbc.271.1.324 Ohman, 2009, Actin and RIG-I/MAVS signaling components translocate to mitochondria upon influenza A virus infection of human primary macrophages, J. Immunol., 182, 5682, 10.4049/jimmunol.0803093 Osiak, 2005, ISG15, an interferon-stimulated ubiquitin-like protein, is not essential for STAT1 signaling and responses against vesicular stomatitis and lymphocytic choriomeningitis virus, Mol. Cell. Biol., 25, 6338, 10.1128/MCB.25.15.6338-6345.2005 Shaw, 2008, Cellular proteins in influenza virus particles, PLoS Pathog., 4, e1000085, 10.1371/journal.ppat.1000085 Shortridge, 2000, Interspecies transmission of influenza viruses: H5N1 virus and a Hong Kong SAR perspective, Vet. Microbiol., 74, 141, 10.1016/S0378-1135(00)00174-7 Simonsen, 1999, The global impact of influenza on morbidity and mortality, Vaccine, 17, S3, 10.1016/S0264-410X(99)00099-7 Steiner, 2000, Proteomics to display lovastatin-induced protein and pathway regulation in rat liver, Electrophoresis, 21, 2129, 10.1002/1522-2683(20000601)21:11<2129::AID-ELPS2129>3.0.CO;2-V Turpin, 2005, Influenza virus infection increases p53 activity: role of p53 in cell death and viral replication, J. Virol., 79, 8802, 10.1128/JVI.79.14.8802-8811.2005 Watanabe, 2006, Identification of Hsc70 as an influenza virus matrix protein (M1) binding factor involved in the virus life cycle, FEBS Lett., 580, 5785, 10.1016/j.febslet.2006.09.040 Wurzer, 2003, Caspase 3 activation is essential for efficient influenza virus propagation, EMBO J., 22, 2717, 10.1093/emboj/cdg279 Yuan, 2001, Influenza B virus NS1 protein inhibits conjugation of the interferon (IFN)-induced ubiquitin-like ISG15 protein, EMBO J., 20, 362, 10.1093/emboj/20.3.362 Zheng, 2011, Mass spectrometry based proteomic studies on viruses and hosts – a review, Anal. Chim. Acta, 702, 149, 10.1016/j.aca.2011.06.045