Protein palmitoylation in the development and plasticity of neuronal connections
Tài liệu tham khảo
Bartels, 1999, Erf2, a novel gene product that affects the localization and palmitoylation of Ras2 in Saccharomyces cerevisiae, Mol Cell Biol, 19, 6775, 10.1128/MCB.19.10.6775
Roth, 2002, The yeast DHHC cysteine-rich domain protein Akr1p is a palmitoyl transferase, J Cell Biol, 159, 23, 10.1083/jcb.200206120
Fukata, 2004, Identification of PSD-95 palmitoylating enzymes, Neuron, 44, 987, 10.1016/j.neuron.2004.12.005
Ohno, 2012, Analysis of substrate specificity of human DHHC protein acyltransferases using a yeast expression system, Mol Biol Cell, 23, 4543, 10.1091/mbc.e12-05-0336
Lord, 2013, Mammalian alpha beta hydrolase domain (ABHD) proteins: lipid metabolizing enzymes at the interface of cell signaling and energy metabolism, Biochim Biophys Acta, 1831, 792, 10.1016/j.bbalip.2013.01.002
Brigidi, 2014, Palmitoylation of [delta]-catenin by DHHC5 mediates activity-induced synapse plasticity, Nat Neurosci, 17, 522, 10.1038/nn.3657
Brigidi, 2015, Activity-regulated trafficking of the palmitoyl-acyl transferase DHHC5, Nat Commun, 6, 10.1038/ncomms9200
Woolfrey, 2015, The palmitoyl acyltransferase DHHC2 regulates recycling endosome exocytosis and synaptic potentiation through palmitoylation of AKAP79/150, J Neurosci, 35, 442, 10.1523/JNEUROSCI.2243-14.2015
Thomas, 2012, Palmitoylation by DHHC5/8 targets GRIP1 to dendritic endosomes to regulate AMPA-R trafficking, Neuron, 73, 482, 10.1016/j.neuron.2011.11.021
Kang, 2004, Presynaptic trafficking of synaptotagmin I is regulated by protein palmitoylation, J Biol Chem, 279, 50524, 10.1074/jbc.M404981200
El-Husseini, 2002, Synaptic strength regulated by palmitate cycling on PSD-95, Cell, 108, 849, 10.1016/S0092-8674(02)00683-9
Dejanovic, 2014, Palmitoylation of gephyrin controls receptor clustering and plasticity of GABAergic synapses, PLoS Biol, 12, e1001908, 10.1371/journal.pbio.1001908
Ponimaskin, 2008, Fibroblast growth factor-regulated palmitoylation of the neural cell adhesion molecule determines neuronal morphogenesis, J Neurosci, 28, 8897, 10.1523/JNEUROSCI.2171-08.2008
Lievens, 2016, ZDHHC3 tyrosine phosphorylation regulates NCAM palmitoylation, Mol Cell Biol, 10.1128/MCB.00144-16
Greaves, 2010, Palmitoylation of the SNAP25 protein family specificity and regulation by DHHC palmitoyl transferases, J Biol Chem, 285, 24629, 10.1074/jbc.M110.119289
Thomas, 2013, Palmitoylation-dependent regulation of glutamate receptors and their PDZ domain-containing partners, Biochem Soc Trans, 41, 72, 10.1042/BST20120223
Montersino, 2015, Slippery signaling: palmitoylation-dependent control of neuronal kinase localization and activity, Mol Membr Biol, 32, 179, 10.1080/09687688.2016.1182652
Prescott, 2009, Palmitoylation of the synaptic vesicle fusion machinery, J Neurochem, 110, 1135, 10.1111/j.1471-4159.2009.06205.x
Lein, 2007, Genome-wide atlas of gene expression in the adult mouse brain, Nature, 445, 168, 10.1038/nature05453
Zhang, 2014, An RNA-sequencing transcriptome and splicing database of glia neurons, and vascular cells of the cerebral cortex, J Neurosci, 34, 11929, 10.1523/JNEUROSCI.1860-14.2014
Sanders, 2015, Curation of the mammalian palmitoylome indicates a pivotal role for palmitoylation in diseases and disorders of the nervous system and cancers, PLoS Comput Biol, 11, e1004405, 10.1371/journal.pcbi.1004405
Ohyama, 2007, Huntingtin-interacting protein 14, a palmitoyl transferase required for exocytosis and targeting of CSP to synaptic vesicles, J Cell Biol, 179, 1481, 10.1083/jcb.200710061
Stowers, 2007, Drosophila huntingtin-interacting protein 14 is a presynaptic protein required for photoreceptor synaptic transmission and expression of the palmitoylated proteins synaptosome-associated protein 25 and cysteine string protein, J Neurosci, 27, 12874, 10.1523/JNEUROSCI.2464-07.2007
Oku, 2013, In silico screening for palmitoyl substrates reveals a role for DHHC1/3/10 (zDHHC1/3/11)-mediated neurochondrin palmitoylation in its targeting to Rab5-positive endosomes, J Biol Chem, 288, 19816, 10.1074/jbc.M112.431676
Noritake, 2009, Mobile DHHC palmitoylating enzyme mediates activity-sensitive synaptic targeting of PSD-95, J Cell Biol, 186, 147, 10.1083/jcb.200903101
Fukata, 2013, Local palmitoylation cycles define activity-regulated postsynaptic subdomains, J Cell Biol, 202, 145, 10.1083/jcb.201302071
Fukata, 2016, vol. 77, 97
Nguyen, 2002, Striatal enriched phosphatase 61 dephosphorylates Fyn at phosphotyrosine 420, J Biol Chem, 277, 24274, 10.1074/jbc.M111683200
Kurup, 2010, Aβ-mediated NMDA receptor endocytosis in Alzheimer’s disease involves ubiquitination of the tyrosine phosphatase STEP61, J Neurosci, 30, 5948, 10.1523/JNEUROSCI.0157-10.2010
Jang, 2015, Regulation of STEP61 and tyrosine-phosphorylation of NMDA and AMPA receptors during homeostatic synaptic plasticity, Mol Brain, 8, 55, 10.1186/s13041-015-0148-4
Dong, 1999, Characterization of the glutamate receptor-interacting proteins GRIP1 and GRIP2, J Neurosci, 19, 6930, 10.1523/JNEUROSCI.19-16-06930.1999
Keith, 2012, Palmitoylation of A-kinase anchoring protein 79/150 regulates dendritic endosomal targeting and synaptic plasticity mechanisms, J Neurosci, 32, 7119, 10.1523/JNEUROSCI.0784-12.2012
Thomas, 2013, DHHC8-dependent PICK1 palmitoylation is required for induction of cerebellar long-term synaptic depression, J Neurosci, 33, 15401, 10.1523/JNEUROSCI.1283-13.2013
Fukata, 2006, Systematic screening for palmitoyl transferase activity of the DHHC protein family in mammalian cells, Methods San Diego Calif, 40, 177, 10.1016/j.ymeth.2006.05.015
Fukata, 2010, Protein palmitoylation in neuronal development and synaptic plasticity, Nat Rev Neurosci, 11, 161, 10.1038/nrn2788
Yokoi, 2016, Identification of PSD-95 depalmitoylating enzymes, J Neurosci, 36, 6431, 10.1523/JNEUROSCI.0419-16.2016
Zhang, 2014, Capping of the N-terminus of PSD-95 by calmodulin triggers its postsynaptic release, EMBO J, 33, 1341
Zhu, 2013, Palmitoylation-dependent CDKL5–PSD-95 interaction regulates synaptic targeting of CDKL5 and dendritic spine development, Proc Natl Acad Sci, 110, 9118, 10.1073/pnas.1300003110
Ricciardi, 2012, CDKL5 ensures excitatory synapse stability by reinforcing NGL-1-PSD95 interaction in the postsynaptic compartment and is impaired in patient iPSC-derived neurons, Nat Cell Biol, 14, 911, 10.1038/ncb2566
Sanderson, 2011, AKAP signaling complexes in regulation of excitatory synaptic plasticity, Neuroscientist, 17, 321, 10.1177/1073858410384740
Jacob, 2005, Gephyrin regulates the cell surface dynamics of synaptic GABAA receptors, J Neurosci, 25, 10469, 10.1523/JNEUROSCI.2267-05.2005
MukherjeeK. Kretschmannova, 2011, The residence time of GABAARs at inhibitory synapses is determined by direct binding of the receptor α1 subunit to gephyrin, J Neurosci, 31, 14677, 10.1523/JNEUROSCI.2001-11.2011
Kaur, 2016, Activity-dependent palmitoylation controls SynDIG1 stability, localization, and function, J Neurosci, 36, 7562, 10.1523/JNEUROSCI.4859-14.2016
Kalashnikova, 2010, SynDIG1: an activity-regulated, AMPA-receptor-interacting transmembrane protein that regulates excitatory synapse development, Neuron, 65, 80, 10.1016/j.neuron.2009.12.021
George, 2015, Palmitoylation of LIM Kinase-1 ensures spine-specific actin polymerization and morphological plasticity, eLife, 4, e06327, 10.7554/eLife.06327
Hotulainen, 2010, Actin in dendritic spines: connecting dynamics to function, J Cell Biol, 189, 619, 10.1083/jcb.201003008
Kang Wan, 2008, Neural palmitoyl-proteomics reveals dynamic synaptic palmitoylation, Nature, 456, 904, 10.1038/nature07605
Niethammer, 2002, Cosignaling of NCAM via lipid rafts and the FGF receptor is required for neuritogenesis, J Cell Biol, 157, 521, 10.1083/jcb.200109059
Missler, 2012, Synaptic cell adhesion, Cold Spring Harb Perspect Biol, 4, a005694, 10.1101/cshperspect.a005694
Li, 2004, FRS2-dependent SRC activation is required for fibroblast growth factor receptor-induced phosphorylation of Sprouty and suppression of ERK activity, J Cell Sci, 117, 6007, 10.1242/jcs.01519
Fromer, 2014, De novo mutations in schizophrenia implicate synaptic networks, Nature, 506, 179, 10.1038/nature12929
Bhattacharyya, 2013, Palmitoylation of amyloid precursor protein regulates amyloidogenic processing in lipid rafts, J Neurosci, 33, 11169, 10.1523/JNEUROSCI.4704-12.2013
Mizumaru, 2009, Suppression of APP-containing vesicle trafficking and production of β-amyloid by AID/DHHC-12 protein, J Neurochem, 111, 1213, 10.1111/j.1471-4159.2009.06399.x
KoryckaA. Łach, 2012, Human DHHC proteins: a spotlight on the hidden player of palmitoylation, Eur J Cell Biol, 91, 107, 10.1016/j.ejcb.2011.09.013
Hornemann, 2015, Palmitoylation and depalmitoylation defects, J Inherit Metab Dis, 38, 179, 10.1007/s10545-014-9753-0
Cajigas, 2012, The local transcriptome in the synaptic neuropil revealed by deep sequencing and high-resolution imaging, Neuron, 74, 453, 10.1016/j.neuron.2012.02.036
Cembrowski, 2016, Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons, eLife, 5, e14997, 10.7554/eLife.14997
Li, 2012, DHHC5 protein palmitoylates flotillin-2 and is rapidly degraded on induction of neuronal differentiation in cultured cells, J Biol Chem, 287, 523, 10.1074/jbc.M111.306183
Kokkola, 2011, Somatostatin receptor 5 is palmitoylated by the interacting ZDHHC5 palmitoyltransferase, FEBS Lett, 585, 2665, 10.1016/j.febslet.2011.07.028
Lakkaraju, 2012, Palmitoylated calnexin is a key component of the ribosome–translocon complex, EMBO J, 31, 1823, 10.1038/emboj.2012.15
Fredericks, 2014, Stable expression and function of the inositol 1,4,5-triphosphate receptor requires palmitoylation by a DHHC6/selenoprotein K complex, Proc Natl Acad Sci, 111, 16478, 10.1073/pnas.1417176111
Ren, 2013, DHHC17 palmitoylates ClipR-59 and modulates ClipR-59 association with the plasma membrane, Mol Cell Biol, 33, 4255, 10.1128/MCB.00527-13
Łach, 2012, Palmitoylation of MPP1 (membrane-palmitoylated protein 1)/p55 is crucial for lateral membrane organization in erythroid cells, J Biol Chem, 287, 18974, 10.1074/jbc.M111.332981
Yang, 2011, Palmitoyl acyltransferase zD17 mediates neuronal responses in acute ischemic brain injury by regulating JNK activation in a signaling module, J Neurosci, 31, 11980, 10.1523/JNEUROSCI.2510-11.2011
Yang, 2014, Regulation of protein trafficking, Cell Cycle, 13, 5, 10.4161/cc.27019
Tian, 2012, Distinct acyl protein transferases and thioesterases control surface expression of calcium-activated potassium channels, J Biol Chem, 287, 14718, 10.1074/jbc.M111.335547
Doyle, 2008, Application of a translational profiling approach for the comparative analysis of CNS cell types, Cell, 135, 749, 10.1016/j.cell.2008.10.029
Ohno, 2006, Intracellular localization and tissue-specific distribution of human and yeast DHHC cysteine-rich domain-containing proteins, Biochim Biophys Acta, 1761, 474, 10.1016/j.bbalip.2006.03.010
Chavda, 2014, Targeting protein palmitoylation: selective inhibitors and implications in disease, Expert Opin Drug Discov, 9, 1005, 10.1517/17460441.2014.933802
Greaves, 2011, DHHC palmitoyl transferases: substrate interactions and (patho)physiology, Trends Biochem Sci, 36, 245, 10.1016/j.tibs.2011.01.003