Phenotypic and genotypic characterisation of Lactobacillus and yeast isolates from a traditional New Zealand Māori potato starter culture
Tài liệu tham khảo
Albala, 2011
Ali, 2011, Isolation and Identification of lactic acid bacteria isolated from traditional drinking yoghurt in Khartoum State, Sudan, Curr Res Bacteriol, 4, 16, 10.3923/crb.2011.16.22
Aon, 2018, Saccharomyces cerevisiae morphological changes and cytokinesis arrest elicited by hypoxia during scale-up for production of therapeutic recombinant proteins, Microb. Cell Factories, 17, 1, 10.1186/s12934-018-1044-2
Aplevicz, 2013, Influence of fermentation time on characteristics of sourdough bread, Br. J. Pharmacol., 49, 233
Arendt, 2007, Impact of sourdough on the texture of bread, Food Microbiol., 24, 165, 10.1016/j.fm.2006.07.011
Axelsson, 2004, Lactic acid bacteria: classification and physiology, 1
Bennani, 2017, Characterization and identification of lactic acid bacteria isolated from Moroccan raw cow's milk, J. Mater. Environ. Sci., 8, 4934
Cai, 2007, Genotypic and phenotypic characterization of Lactobacillus casei strains isolated from different ecological niches suggests frequent recombination and niche specificity, Microbiology, 153, 2655, 10.1099/mic.0.2007/006452-0
Cauvain, 2007
Chavan, 2011, Sourdough technology—a traditional way for wholesome foods: a review, Compr. Rev. Food Sci. Food Saf., 10, 169, 10.1111/j.1541-4337.2011.00148.x
Clarke, 2005, A review of the application of sourdough technology to wheat breads, Adv. Food Nutr. Res., 49, 137, 10.1016/S1043-4526(05)49004-X
Clemons, 1996, Colony phenotype switching in clinical and non-clinical isolates of Saccharomyces cerevisiae, J. Med. Vet. Mycol., 34, 259, 10.1080/02681219680000441
Corsetti, 2001, Phenotypic and molecular identification and clustering of lactic acid bacteria and yeasts from wheat (species Triticum durum and Triticum aestivum) sourdoughs of Southern Italy, Int. J. Food Microbiol., 64, 95, 10.1016/S0168-1605(00)00447-5
Corsetti, 2007, Lactobacilli in sourdough fermentation, Food Res. Int., 40, 539, 10.1016/j.foodres.2006.11.001
de Las Rivas, 2006, Development of a multilocus sequence typing method for analysis of Lactobacillus plantarum strains, Microbiology, 152, 85, 10.1099/mic.0.28482-0
De Vuyst, 2016, Yeast diversity of sourdoughs and associated metabolic properties and functionalities, Int. J. Food Microbiol., 239, 26, 10.1016/j.ijfoodmicro.2016.07.018
De Vuyst, 2005, The sourdough microflora: biodiversity and metabolic interactions, Trends Food Sci. Technol., 16, 43, 10.1016/j.tifs.2004.02.012
De Vuyst, 2007, Biodiversity and identification of sourdough lactic acid bacteria, Food Microbiol., 24, 120, 10.1016/j.fm.2006.07.005
De Vuyst, 2014, Microbial ecology of sourdough fermentations: diverse or uniform?, Food Microbiol., 37, 11, 10.1016/j.fm.2013.06.002
Desai, 2006, Discrimination of dairy industry isolates of the Lactobacillus casei group, J. Dairy Sci., 89, 3345, 10.3168/jds.S0022-0302(06)72371-2
Foschino, 2004, Comparison of cultural methods for the identification and molecular investigation of yeasts from sourdoughs for Italian sweet baked products, FEMS Yeast Res., 4, 609, 10.1016/j.femsyr.2003.12.006
Giraffa, 2014, Overview of the ecology and biodiversity of the, LAB. Lactic Acid Bact. Biodivers. Taxonomy, 45, 10.1002/9781118655252.ch4
Grześkowiak, 2011, Manufacturing process influences properties of probiotic bacteria, Br. J. Nutr., 105, 887, 10.1017/S0007114510004496
Häggman, 2008, Microbial re-inoculation reveals differences in the leavening power of sourdough yeast strains, LWT--Food Sci. Technol., 41, 148, 10.1016/j.lwt.2007.02.001
Harrigan, 1998
Hassan, 2008, Antifungal activity of Lactobacillus paracasei ssp. tolerans isolated from a sourdough bread culture, Int. J. Food Microbiol., 121, 112, 10.1016/j.ijfoodmicro.2007.11.038
Hedberg, 2008, Sugar fermentation in probiotic bacteria–an in vitro study, Oral Microbiol. Immunol., 23, 482, 10.1111/j.1399-302X.2008.00457.x
Holzapfel, 2014
Huson, 2006, Application of phylogenetic networks in evolutionary studies, Mol. Biol. Evol., 23, 254, 10.1093/molbev/msj030
Kaban, 2008, Identification of lactic acid bacteria and gram-positive catalase-positive cocci isolated from naturally fermented sausage (sucuk), J. Food Sci., 73, M385, 10.1111/j.1750-3841.2008.00906.x
Katoh, 2013, MAFFT multiple sequence alignment software version 7: improvements in performance and usability, Mol. Biol. Evol., 30, 772, 10.1093/molbev/mst010
Karaman, 2018, Use of phytase active yeasts and lactic acid bacteria isolated from sourdough in the production of whole wheat bread, Int. J. Food Microbiol., 91, 557
Khalid, 2011, An overview of lactic acid bacteria, Int. J. Biosci., 1, 1
Khedid, 2009, Characterization of lactic acid bacteria isolated from the one humped camel milk produced in Morocco, Microbiol. Res., 164, 81, 10.1016/j.micres.2006.10.008
Koryszewska-Bagińska, 2019, Comparative genomics and functional analysis of a highly adhesive dairy Lactobacillus paracasei subsp. paracasei IBB3423 strain, Appl. Microbiol. Biotechnol., 103, 7617, 10.1007/s00253-019-10010-1
Lattanzi, 2013, The lactic acid bacteria and yeast microbiota of eighteen sourdoughs used for the manufacture of traditional Italian sweet leavened baked goods, Int. J. Food Microbiol., 163, 71, 10.1016/j.ijfoodmicro.2013.02.010
Li, 2018, Minimap2: pairwise alignment for nucleotide sequences, Bioinformatics, 34, 3094, 10.1093/bioinformatics/bty191
Li, 2009, The sequence alignment/map format and SAMtools, Bioinformatics, 25, 2078, 10.1093/bioinformatics/btp352
Liu, 2015, Effect of initial pH on growth characteristics and fermentation properties of Saccharomyces cerevisiae, J. Food Sci., 80, M800, 10.1111/1750-3841.12813
Luangsakul, 2009, Lactic acid bacteria and yeasts isolated from the starter doughs for Chinese steamed buns in Thailand, LWT--Food Sci. Technol., 42, 1404, 10.1016/j.lwt.2009.03.007
McLean, 2004
Meroth, 2003, Identification and population dynamics of yeasts in sourdough fermentation processes by PCR-denaturing gradient gel electrophoresis, Appl. Environ. Microbiol., 69, 7453, 10.1128/AEM.69.12.7453-7461.2003
Meroth, 2004, Characterisation of the microbiota of rice sourdoughs and description of Lactobacillus spicheri sp. nov, Syst. Appl. Mcirobiol., 27, 151, 10.1078/072320204322881763
Minervini, 2014, Ecological parameters influencing microbial diversity and stability of traditional sourdough, Int. J. Food Microbiol., 171, 136, 10.1016/j.ijfoodmicro.2013.11.021
Mithun, 2015, Isolation and Identification of lactobacilli from raw milk samples obtained from Aarey Milk Colony, Int. J. Sci. Res. Publ., 5, 1
Munoz-Quezada, 2013, Isolation, identification and characterisation of three novel probiotic strains (Lactobacillus paracasei CNCM I-4034, Bifidobacterium breve CNCM I-4035 and Lactobacillus rhamnosus CNCM I-4036) from the faeces of exclusively breast-fed infants, Br. J. Nutr., 109, S51, 10.1017/S0007114512005211
Muyanja, 2003, Isolation, characterisation and identification of lactic acid bacteria from bushera: a Ugandan traditional fermented beverage, Int. J. Food Microbiol., 80, 201, 10.1016/S0168-1605(02)00148-4
Nikita, 2012, Isolation, identification and characterization of lactic acid bacteria from dairy sludge sample, J. Environ. Res. Develop, 7, 1
Nionelli, 2016, Sourdough-based biotechnologies for the production of gluten-free foods, Foods, 5, 65, 10.3390/foods5030065
Paterson, 2006, Flavour in sourdough breads: a review, Trends Food Sci. Technol., 17, 557, 10.1016/j.tifs.2006.03.006
Puniya, 2012, Isolation and biochemical characterization of Lactobacillus species isolated from Dahi, Int. J. Curr. Microbiol. App. Sci., 4, 1042
Ramani, 1998, Efficacy of API 20C and ID 32C systems for identification of common and rare clinical yeast isolates, J. Clin. Microbiol., 36, 3396, 10.1128/JCM.36.11.3396-3398.1998
Rossi, 1996, The yeasts in sourdough, Adv. Food Nutr. Res., 18, 201
Rush, 2010, Traditional foods reported by a Māori community in 2004, MAI Review, 2, 1
Sacchi, 2005, High level of sequence diversity in the 16S rRNA genes of Haemophilus influenzae isolates is useful for molecular subtyping, J. Clin. Microbiol., 43, 3734, 10.1128/JCM.43.8.3734-3742.2005
Sáez, 2017, Molecular identification and technological characterization of lactic acid bacteria isolated from fermented kidney beans flours (Phaseolus vulgaris L. and P. coccineus) in northwestern Argentina, Food Res. Int., 102, 605, 10.1016/j.foodres.2017.09.042
Srivastava, 2018, A proteolytic complex targets multiple cell wall hydrolases in Pseudomonas aeruginosa, mBio, 9, 10.1128/mBio.00972-18
Sutula, 2012, Culture media for differential isolation of Lactobacillus casei Shirota from oral samples, J. Microbiol. Methods, 90, 65, 10.1016/j.mimet.2012.03.015
Temmerman, 2004, Identification of lactic acid bacteria: culture-dependent and culture-independent methods, Trends Food Sci. Technol., 15, 348, 10.1016/j.tifs.2003.12.007
Vos, 2011, ume 3
Weckx, 2010, Lactic acid bacteria community dynamics and metabolite production of rye sourdough fermentations share characteristics of wheat and spelt sourdough fermentations, Food Microbiol., 27, 1000, 10.1016/j.fm.2010.06.005
Wick, 2017, Completing bacterial genome assemblies with multiplex MinION sequencing, Microb. Genom., 3
Zhang, 2015, Investigation of microbial communities of Chinese sourdoughs using culture‐dependent and DGGE approaches, J. Food Sci., 80, M2535, 10.1111/1750-3841.13093
Zhang, 2011, Diversity of lactic acid bacteria and yeasts in traditional sourdoughs collected from western region in Inner Mongolia of China, Food Control, 22, 767, 10.1016/j.foodcont.2010.11.012