Principi, 2019, Advantages and Limitations of Bacteriophages for the Treatment of Bacterial Infections, Front Pharmacol, 10, 513, 10.3389/fphar.2019.00513
Ramos-Vara, 2016, Advanced Diagnostic Techniques, Canine Feline Cytology, 453, 10.1016/B978-1-4557-4083-3.00017-6
Smartt, 2011, Bacteriophage reporter technology for sensing and detecting microbial targets, Anal Bioanal Chem, 400, 991, 10.1007/s00216-010-4561-3
Schofield, 2012, Phage-based platforms for the clinical detection of human bacterial pathogens, Bacteriophage., 2, 105, 10.4161/bact.19274
Lang, 2014, Specific probe selection from landscape phage display library and its application in enzyme-linked immunosorbent assay of free prostate-specific antigen, Anal Chem, 86, 2767, 10.1021/ac404189k
Jaye, 2004, Direct fluorochrome labeling of phage display library clones for studying binding specificities: applications in flow cytometry and fluorescence microscopy, J Immunological Methods, 295, 119, 10.1016/j.jim.2004.09.011
Slootweg, 2006, Fluorescent T7 display phages obtained by translational frameshift, Nucleic Acids Res, 34, 10.1093/nar/gkl600
Tanji, 2004, Escherichia coli detection by GFP-labeled lysozyme-inactivated T4 bacteriophage, J Biotechnol, 114, 11, 10.1016/j.jbiotec.2004.05.011
Meile, 2020, Reporter Phage-Based Detection of Bacterial Pathogens: Design Guidelines and Recent Developments, Viruses., 12, 944, 10.3390/v12090944
Timme, 1984, Induction of Bacteriophage from Members of the Mycobacterium avium, Mycobacterium intracellulare, Mycobacterium scrofulaceum Serocomplex, J Microbiology (Seoul, Korea), 130, 2059
O’Donnell, 2019, Early Detection of Emergent Extensively Drug-Resistant Tuberculosis by Flow Cytometry-Based Phenotyping and Whole-Genome Sequencing, Antimicrobial Agents Chemotherapy, 63
Urdániz, 2016, Rapid Whole-Cell Assay of Antitubercular Drugs Using Second-Generation Fluoromycobacteriophages, Antimicrobial Agents Chemotherapy, 60, 3253, 10.1128/AAC.03016-15
Ford, 1998, Mycobacteriophage TM4: Genome structure and gene expression, Tuber Lung Dis: Off J Int Union Tuberculosis Lung Disease, 79, 63, 10.1054/tuld.1998.0007
Rondón, 2018, Fluoromycobacteriophages Can Detect Viable Mycobacterium tuberculosis and Determine Phenotypic Rifampicin Resistance in 3–5 Days from Sputum Collection, Front Microbiol, 9, 9, 10.3389/fmicb.2018.01471
Anany, 2017, Print to detect: A rapid and ultrasensitive phage-based dipstick assay for foodborne pathogens, Anal Bioanal Chem, 410, 1217, 10.1007/s00216-017-0597-y
Swift, 2016, Evidence of Mycobacterium tuberculosis complex bacteraemia in intradermal skin test positive cattle detected using phage-RPA, Virulence, 7, 779, 10.1080/21505594.2016.1191729
Sergueev, 2017, Highly Sensitive Bacteriophage-Based Detection of Brucella abortus in Mixed Culture and Spiked Blood, Viruses, 9, 144, 10.3390/v9060144
Mulvey, 2014, Optimization of a Nucleic Acid-Based Reporter System to Detect Mycobacterium tuberculosis Antibiotic Sensitivity, Antimicrobial Agents Chemotherapy, 59, 407, 10.1128/AAC.03135-14
Mulvey, 2012, C. Generation of a Novel Nucleic Acid-Based Reporter System to Detect Phenotypic Susceptibility to Antibiotics in Mycobacterium tuberculosis, mBio, 3, 10.1128/mBio.00312-11
Malagon, 2020, Phage-Mediated Molecular Detection (PMMD): A Novel Rapid Method for Phage-Specific Bacterial Detection, Viruses, 12, 435, 10.3390/v12040435
Wang, 2016, Ultrasensitive Detection of Bacteria by Targeting Abundant Transcripts, Sci Rep, 6, 20393, 10.1038/srep20393
Šuster, 2017, Quick bacteriophage-mediated bioluminescence assay for detecting Staphylococcus spp. in sonicate fluid of orthopaedic artificial joints, N Microbiologica: Off J Italian Soc Medical, Odontoiatric, Clin Microbiology (SIMMOC), 40, 190
Vaidya, 2020, Detection and di_erential identification of typhoidal Salmonella using bacteriophages and resazurin, 3 Biotech, 10, 196, 10.1007/s13205-020-02187-4
Yang, 2020, Rapid detection of Escherichia coli using bacteriophage-induced lysis and image analysis, PLoS One, 15
Paramasivam, 2022, Advances in the Development of Phage-Based Probes for Detection of Bio-Species, Biosens (Basel), 12, 30, 10.3390/bios12010030
Rizzo, 2021, Rapid detection of bacterial pathogens in blood through engineered phages-beads and integrated real-time pcr into microchip, Sens Actuators Chem, 329
Niemeyer, 1999, Self-assembly of DNA-streptavidin nanostructures and their use as reagents in immuno-PCR, Nucleic Acids Res, 27, 4553, 10.1093/nar/27.23.4553
Niemeyer, 2001, Hapten-Functionalized DNA-Streptavidin Nanocircles as Supramolecular Reagents in a Competitive Immuno-PCR Assay, Angew Chem Int Ed, 40, 3169, 10.1002/1521-3773(20010903)40:17<3169::AID-ANIE3169>3.0.CO;2-I
Pan, 2005, An aggregation-specific enzyme-linked immunosorbent assay: Detection of conformational differences between recombinant PrP protein dimers and PrP(Sc) aggregates, J Virology, 79, 12355, 10.1128/JVI.79.19.12355-12364.2005
Wuertzer, 2008, CNS delivery of vectored prion-specific single-chain antibodies delays disease onset, Mol Ther: J Am Soc Gene Therapy, 16, 481, 10.1038/sj.mt.6300387
Guo, 2006, Phage display mediated immuno-PCR, Nucleic Acids Res, 34, 10.1093/nar/gkl260
Wang, 2016, Anti-idiotypic VHH phage display-mediated immuno-PCR for ultrasensitive determination of mycotoxin zearalenone in cereals, Talanta, 147, 410, 10.1016/j.talanta.2015.09.072
Zhang, 2013, Natural phage nanoparticle-mediated real-time immuno-PCR for ultrasensitive detection of protein marker, Chem Commun, 49, 3778, 10.1039/c3cc40688a
Kim, 2017, Sensitive detection of viable Escherichia coli O157:H7 from foods using a luciferase-reporter phage phiV10lux, Int J Food Microbiology, 254, 11, 10.1016/j.ijfoodmicro.2017.05.002
Mayer, 2016, Fluorescent Reporter DS6A Mycobacteriophages Reveal Unique Variations in Infectibility and Phage Production in Mycobacteria, J Bacteriol, 198, 3220, 10.1128/JB.00592-16
Jacobs, 2014, Gene Transfer in Mycobacterium tuberculosis: Shuttle Phasmids to Enlightenment, Microbiol Spectr, 2, 10.1128/microbiolspec.MGM2-0037-2013
Chen, 2019, Genetic Engineering of Bacteriophages Against Infectious Diseases, Front Microbiol, 10, 954, 10.3389/fmicb.2019.00954
Mosberg, 2010, Lambda red recombineering in Escherichia coli occurs through a fully single-stranded intermediate, Genetics, 186, 791, 10.1534/genetics.110.120782
Marinelli, 2019, Genetic Manipulation of Lytic Bacteriophages with BRED: Bacteriophage Recombineering of Electroporated DNA, Methods Mol Biol, 1898, 69, 10.1007/978-1-4939-8940-9_6
Zhang, 2022, CRISPR-Cas9 Based Bacteriophage Genome Editing, Microbiol Spectr, 10, 10.1128/spectrum.00820-22
Lino, 2018, Delivering CRISPR: a review of the challenges and approaches, Drug Delivery, 25, 1234, 10.1080/10717544.2018.1474964
Pant, 2020, CTX phage of Vibrio cholerae: Genomics and applications, Vaccine, 38, A7, 10.1016/j.vaccine.2019.06.034
Ramirez-Chamorro, 2021, Strategies for Bacteriophage T5 Mutagenesis: Expanding the Toolbox for Phage Genome Engineering, Front Microbiol, 12, 10.3389/fmicb.2021.667332
Hao, 2018, Analysis of CRISPR-Cas System in Streptococcus thermophilus and Its Application, Front Microbiol, 9, 257, 10.3389/fmicb.2018.00257
Cater, 2017, A Novel Staphylococcus Podophage Encodes a Unique Lysin with Unusual Modular Design, mSphere., 2, 10.1128/mSphere.00040-17
Vandersteegen, 2011, Microbiological and Molecular Assessment of Bacteriophage ISP for the Control of Staphylococcus aureus, PLoS One, 6, 10.1371/journal.pone.0024418
Nayeemul Bari, 2019, CRISPR-Cas10 assisted editing of virulent staphylococcal phages, Methods Enzymology, 616, 385, 10.1016/bs.mie.2018.10.023
Noskov, 2011, Isolation of circular yeast artificial chromosomes for synthetic biology and functional genomics studies, Nat Protoc, 6, 89, 10.1038/nprot.2010.174
Kilcher, 2018, Cross-genus rebooting of custom-made, synthetic bacteriophage genomes in L-form bacteria, Proc Natl Acad Sci U S A, 115, 567, 10.1073/pnas.1714658115
Moon, 2019, Research Progress of M13 Bacteriophage-Based Biosensors, Nanomaterials (Basel), 9, 1448, 10.3390/nano9101448
Smartt, 2011, Bacteriophage reporter technology for sensing and detecting microbial targets, Anal Bioanal Chem, 400, 991, 10.1007/s00216-010-4561-3
Wisuthiphaet, 2021, Application of Engineered Bacteriophage T7 in the Detection of Bacteria in Food Matrices, Front Microbiol, 12, 10.3389/fmicb.2021.691003