Paenibacillus polymyxa bioactive compounds for agricultural and biotechnological applications

Aktar, 2009, Impact of pesticides use in agriculture: their benefits and hazards, Interdiscip. Toxicol., 2, 1, 10.2478/v10102-009-0001-7 Alshelmani, 2016, Effects of feeding different levels of palm kernel cake fermented by Paenibacillus polymyxa ATCC 842 on nutrient digestibility, intestinal morphology and gut microflora in broiler chicken, Anim. Feed Sci. Technol., 216, 216, 10.1016/j.anifeedsci.2016.03.019 Ash, 1993, Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test, A Van Leeuw J Microb, 64, 253, 10.1007/BF00873085 Awasthi, 2017, Application of EPS in agriculture: an important natural resource for crop improvement, Agric. Res. Technol., 8 Bayer, 2004, The cellulosomes: multienzyme machine for degradation for plant cell wall polysaccharides, Annu. Rev. Microbiol., 58, 521, 10.1146/annurev.micro.57.030502.091022 Bianciotto, 2004, Mucoid mutants of the biocontrol strain Pseudomonas fluorescens CHA0 show increased ability in biofilm formation, Curr. Opin. Microbiol., 7, 602 Bohra, 2018, Paenibacillus polmyxa ND25: candidate genome for lignocellulosic biomass utilization, 3 Biotech, 8, 248, 10.1007/s13205-018-1274-3 Cerda, 2017, Towards a competitive solid state fermentation: cellulases production from coffee husk by sequential batch operation and role of microbial diversity, Sci. Total Environ., 589, 56, 10.1016/j.scitotenv.2017.02.184 Chang, 2010, Mechanism of macrophage activation induced by Β-glucan produced from Paenibacillus polymyxa JB115, Biochem. Biophys. Res. Commun., 391, 1358, 10.1016/j.bbrc.2009.12.064 Chatterjee, 2005, Biosynthesis and mode of action of lantibiotics, Chem. Rev., 105, 633, 10.1021/cr030105v Cheng, 2017, Volatile organic compounds from Paenibacillus polymyxa KM2501-1 control Meloidogyne incognita by multiple strategies, Sci. Rep., 7, 16213, 10.1038/s41598-017-16631-8 Davies, 2010, 1 Dischinger, 2014, Lantibiotics: promising candidates for future applications in health care, Int. J. Med. Microbiol., 304, 51, 10.1016/j.ijmm.2013.09.003 Eastman, 2014, Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness, BMC Genomics, 15, 851, 10.1186/1471-2164-15-851 Eyidogan, 2012 Figueiredo, 2008, Alleviation of drought stress in the common bean Phaseolus Vulgaris L. By Co-inoculation with Paenibacillus polymyxa and Rhizobium tropici, Appl. Soil Ecol., 4, 182, 10.1016/j.apsoil.2008.04.005 Gastelum-Arellanez, 2014, Extracelluar endoglucanase activity from Paenibacillus polymyxa Beb-50: production, optimization, enzymatic characterization, World J. Microbiol. Biotechnol., 30, 2953, 10.1007/s11274-014-1723-z Ghio, 2017, Paenibacillus sp. A59 GH10 and GH11 extracellular endoxylanases: application in biomass bioconversion, Bioenergy Res., 11, 174, 10.1007/s12155-017-9887-7 Górska, 2015, Degradation and colonization of cellulose by diazotrophic strain of Paenibacillus polymyxa isolated form soil, J. Biorem. Biodegrad., 6, 271, 10.4172/2155-6199.1000271 Gouzou, 1993, Effect of inoculation with Bacillus polymyxa on soil aggregation in the wheat rhizosphere: preliminary examination, Geoderma, 56, 479, 10.1016/0016-7061(93)90128-8 Grady, 2016, Current knowledge and perspectives of Paenibacillus: a review, Microbial Cell Factory, 1, 203, 10.1186/s12934-016-0603-7 Guoqun, 2016, Cultivation of Paenibacillus polymyxa by solid-state fermentation of pear residues, Trans. Chin. Soc. Agric. Eng., 32, 303 Gupta, 2016, Paenibacillus polymyxa as a water additive improved immune response of Cyprinus carpio and disease resistance against Aeromonas hydrophila, Aquaculture Reports, 4, 86, 10.1016/j.aqrep.2016.07.002 Han, 2017, Mechanism of action of AMP-Jsa9, a LI-F-type Antimicrobial peptide produced by Paenibacillus polymyxa Jsa-9, against Fusarium moniliforme, Fungal Genet. Biol., 104, 45, 10.1016/j.fgb.2017.05.002 Hao, 2017, Colonization of wheat, maize and cucumber by Paenibacillus polymyxa WLY78, PLoS One, 12, 1, 10.1371/journal.pone.0169980 Hassiba, 2014, Study of lead adsorption from aqueous solutions on agar beads with EPS produced from Paenibacillus polymyxa, Chem. Eng. Trans., 38, 31 He, 2007, Isolation and identification of a Paenibacillus polymyxa strain that coproduces a novel lantibiotic andpolymyxin, Appl. Environ. Microbiol., 7, 168, 10.1128/AEM.02023-06 He, 2008, N-terminal acetylation in paenibacillin, a novel lantibiotic, FEBS Lett., 582, 2787, 10.1016/j.febslet.2008.07.008 Hong, 2014, Antioxidant and antitumor activities of β-glucan-rich exopolysaccharides with different molecular weight from Paenibacillus polymyxa JB115, J. Korean Soc. Appl. Biol. Chem., 57, 105, 10.1007/s13765-013-4252-9 Hong, 2016, Biocontrol activity of Paenibacillus polymyxa AC-1 against Pseudomonas syringae and its interaction with Arabidopsis Thaliana, Microbiol. Res., 185, 13, 10.1016/j.micres.2016.01.004 Howard, 2003, Lignocellulose biotechnology: issues of bioconversion and enzyme production, Afr. J. Biotechnol., 2, 602, 10.5897/AJB2003.000-1115 Huang, 2015, Biosynthesis of paenibacillin, a lantibiotic with N-terminal acetylation by Paenibacillus polymyxa, Microbiol. Res., 181, 15, 10.1016/j.micres.2015.08.001 Huo, 2012, Comparison of the spores of Paenibacillus polymyxa Prepared at different temperatures, Biotechnol. Lett., 34, 925, 10.1007/s10529-012-0853-3 Jeon, 2010, Effects of initial inoculation density of Paenibacillus polymyxa on colony formation and starch-hydrolytic activity in relation to root rot in Ginseng, J. Appl. Microbiol., 109, 461, 10.1111/j.1365-2672.2010.04674.x Kumar, 2012, Production and characterization of carboxylmetyhl cellulose from Paenibacillus polymyxa using mango peel as substrate, J. Environ. Biol., 33, 81 Kumari, 2014, Microcosmic study of endosulfan degradation by Paenibacillus sp. ISTP10 and its toxicological evaluation using mammalian cell line, Int. Biodeterior. Biodegrad., 96, 33, 10.1016/j.ibiod.2014.08.003 Lee, 2012, Induced resistance by A long-chain bacterial volatile: elicitation of plant systemic defense by a C13 volatile produced by Paenibacillus polymyxa, PLoS One, 7, E48744, 10.1371/journal.pone.0048744 Li, 2015, Expression of Paenibacillus polymyxa Β-1,3-1,4-glucanase in Streptomyces lydicus A01 improves its biocontrol effect against Botrytis cinerea, Biol. Control, 90, 141, 10.1016/j.biocontrol.2015.06.008 Liang, 2015, Recent advances in exopolysaccharides from Paenibacillus spp.: production, isolation, structure and bioactivities, Mar. Drugs, 13, 1847, 10.3390/md13041847 Liu, 2012, Preparation, antioxidant and antitumor activities in vitro of different derivatives of levan from endophytic bacterium Paenibacillus polymyxa EJS-3, Food Chem. Toxicol., 50, 767, 10.1016/j.fct.2011.11.016 Lu, 2010, Purification and characterization of a novel anticoagulant and fibrinolytic enzyme produced by endophytic bacterium Paenibacillus polymyxa EJS-3, Thromb. Res., 126, e349, 10.1016/j.thromres.2010.08.003 Lv, 2015, Expression, purification, and characterization of a recombined fibrinolytic enzyme from endophytic Paenibacillus polymyxa EJS-3 in Escherichia coli, Food Sci. Biotechnol., 24, 125, 10.1007/s10068-015-0018-y Mageshwaran, 2012, Isolation and partial characterization of antibacterial lipopeptide produced by Paenibacillus polymyxa HKA-15 against phytopathogen Xanthomonas campestris pv. Phaseoli M-5, World J. Microbiol. Biotechnol., 28, 909, 10.1007/s11274-011-0888-y Marco, 2017, Raw sugarcane baggase as carbon source for Xylanase production by Paenibacillus species: a potential degrader of agricultural wastes, Environ. Sci. Pollut. Control Ser., 24, 19057, 10.1007/s11356-017-9494-3 Meena, 2016, Effect of seed bio-priming and N doses under varied soil type on nitrogen use efficiency (NUE) of wheat (Triticum aestivum L.) under greenhouse conditions, Biocatal Agric Biotechnol, 6, 68, 10.1016/j.bcab.2016.02.010 Midhun, 2017, Antibacterial activity and probiotic characterization of Authochthonous Paenibacillus polymyxa isolated from Anabas testudineus (Bloch: 1792), Microb. Pathog., 113, 403, 10.1016/j.micpath.2017.11.019 Mohd Din, 2019, Paenibacillus polymyxa role involved in phosphate solubilization and growth promotion of Zea mays under abiotic stress condition, Proc. Natl. Acad. Sci. India B Biol. Sci., 1 Mok, 1994, Cytokinins and plant development - an overview, 115 Naghmouchi, 2013, Required characteristics of Paenibacillus polymyxa JB-0501 as potential probiotic, Arch. Microbiol., 195, 537, 10.1007/s00203-013-0905-7 Niu, 2013, Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1, BMC Microbiol., 13, 137, 10.1186/1471-2180-13-137 Orencio-Trejo, 2016, Assessing the performance of bacterial cellulases: the use of Bacillus and Paenibacillus strains as enzyme sources for Lignocellulose saccharification, Bioenergy Res., 9, 1023, 10.1007/s12155-016-9797-0 Padda, 2017, Paenibacillus polymyxa: a prominent biofertilizer and biocontrol agent for sustainable agriculture, 165 Park, 2017, Identification of the biosynthesis gene cluster for the novel lantibiotic paenilan from Paenibacillus polymyxa E681 and characterization of its product, J. Appl. Microbiol., 123, 1133, 10.1111/jam.13580 Phi, 2010, Assessment of root-associated Paenibacillus polymyxa groups on growth promotion and induced systemic resistance in pepper, J. Microbiol. Biotechnol., 20, 1605 Pieterse, 2014, Induced systemic resistance by beneficial microbes, Annu. Rev. Phytopathol., 52, 347, 10.1146/annurev-phyto-082712-102340 Premachandra, 2016, Bacterial modes of action for enhancing of plant growth, J. Biotechnol. Biomater., 6, 3 Priest, 2009, Genus I: Paenibacillus Ash, priest and collins 1994, 852VP, vol. 3, 269 Puri, 2016, Seedling growth promotion and nitrogen fixation by A bacterial endophyte Paenibacillus polymyxa P2b-2r and its GFP derivative in corn in A long-term trial, Symbiosis, 69, 123, 10.1007/s13199-016-0385-z Rafigh, 2014, Optimizationof culture medium and modeling of curdlan production from Paenibacillus polymyxa by RSM and ANN, Int. J. Biol. Macromol., 70, 463, 10.1016/j.ijbiomac.2014.07.034 Rawat, 2016, Potassium and its role in sustainable agriculture, 235 Raza, 2010, Growth, Fe3+ reductase activity and siderophore production by Paenibacillus polymyxa SQR-21 under differential iron conditions, Curr. Microbiol., 61, 390, 10.1007/s00284-010-9624-3 Raza, 2011, Optimization, purification, characterization and antioxidant activity of an extracellular polysaccharides produced by Paenibacillus polymyxa SQR-21, Bioresour. Technol., 102, 6095, 10.1016/j.biortech.2011.02.033 Raza, 2015, Production of volatile organic compounds by an antagonistic strain Paenibacillus polymyxa WR-2 in the presence of root exudates and organic fertilizer and their antifungal activity against Fusarium oxysporum F. Sp. Niveum, Biol. Control, 80, 89, 10.1016/j.biocontrol.2014.09.004 Redmile-Gordon, 2015, Soil organic matter and the extracellular microbial matrix show contrasting responses to C and N availability, Soil Biol. Biochem., 88, 257, 10.1016/j.soilbio.2015.05.025 Rybakova, 2017, Aerial warfare: a volatile dialogue between the plant pathogen Verticillium longisporum and its antagonist Paenibacillus polymyxa, Front. Plant Sci., 8, 1294, 10.3389/fpls.2017.01294 Saha, 2016, Can potassium-solubilising bacteria mitigate the potassium problems in India?, 127 Shaheen, 2011, Paenibacillus polymyxa PKB1 produces variants of polymyxin B-type Antibiotics, Chem. Biol., 18, 1640, 10.1016/j.chembiol.2011.09.017 Shi, 2017, Paenibacillus polymyxa NSY50 suppresses Fusarium wilt in cucumbers by regulating the rhizospheric microbial community, Sci. Rep., 7, 41234, 10.1038/srep41234 Tambadou, 2015, Characterization of the colistin (polymyxin E1 and E2) biosynthetic gene cluster, Arch. Microbiol., 197, 521, 10.1007/s00203-015-1084-5 Timmusk, 1999, Cytokinin production by Paenibacillus polymyxa, Soil Biol. Biochem., 31, 1847, 10.1016/S0038-0717(99)00113-3 Timmusk, 2019, Paenibacillus polymyxa biofilm polysaccharides antagonise Fusarium graminearum, Sci. Rep., 9, 10.1038/s41598-018-37718-w Tiwari, 2018, 1-Aminocyclopropane-1-carboxylic acid deaminase producing beneficial rhizobacteria ameliorate the biomass characters of Panicum maximum Jacq. by mitigating drought and salt stress, Sci. Rep., 8, 17513, 10.1038/s41598-018-35565-3 Vater, 2015, Characterization of novel fusaricidins produced by Paenibacillus polymyxa M1 using MALDI-TOF mass spectrometry, Am. Soc. Mass Spectrom., 26, 1548, 10.1007/s13361-015-1130-1 Vater, 2018, Genome mining of lipopeptide biosynthesis of Paenibacillus polymyxa, Chembiochem, 4, 744, 10.1002/cbic.201700615 Vijayaraghavan, 2016, Purification, characterization of a novel fibrinolytic enzyme from Paenibacillus sp. IND8 and its in vitro thrombolytic activity, South Indian J. Biol. Sci., 2, 434, 10.22205/sijbs/2016/v2/i4/103450 Wang, 2011, Production and characterization of exopolysaccharides and antioxidant from Paenibacillus sp. TKU023, N. Biotech., 28, 559, 10.1016/j.nbt.2011.03.003 Weller, 1994, Current challenges in introducing beneficial microorganisms into the rhizosphere, 1 Wen, 2010, Cloning, expression and application of Β-1,3-1-4-glucanase gene from Paenibacillus polymyxa CP7, J. Integr. Agric., 43, 4614 Weselowski, 2016, Isolation, identification and characterization of Paenibacillus polymyxa CR1 with potential for biopesticide, biofertilization, biomass degradation and biofuel production, BMC Microbiol., 16, 244, 10.1186/s12866-016-0860-y Xu, 2014, Bioconversion of wastewater from sweet potato starch production to Paenibacillus polymyxa biofertilizer for tea plants, Sci. Rep., 4, 4131, 10.1038/srep04131 Yadav, 2018, Plant Hormones: their nature occurrence and functions: A chapter, Eur. J. Biotechnol. Biosci., 6, 13 Yadav, 2016, Dynamics of Potassium and their bioavailability for plant nutrition, 187 Yasin, 2016, Can Bacillus spp. enhance K+ uptake in crop species, 163 Yegorenkova, 2011, biofilm formation by Paenibacillus polymyxa strains differing in the production and rheological properties of their exopolysaccharides, Curr. Microbiol., 62, 1554, 10.1007/s00284-011-9896-2 Zhao, 2011, Antifungal, insecticidal and herbicidal properties of volatile components of Paenibacillus polymyxa strain BMP-11, Agric. Sci. China, 10, 728, 10.1016/S1671-2927(11)60056-4 Zhao, 2017, Development of a novel compound microbial agent for degradation of kitchen waste, Braz. J. Microbiol., 48, 442, 10.1016/j.bjm.2016.12.011 Zhou, 2016, Paenibacillus polymyxa BFKC01 enhances plant iron absorption via improved root systems and activated iron acquisition mechanisms, Plant Physiol. Biochem., 105, 162, 10.1016/j.plaphy.2016.04.025