PDLIM5 and susceptibility to bipolar disorder: a family-based association study and meta-analysis

Psychiatric Genetics - Tập 18 Số 3 - Trang 116-121 - 2008
Jiajun Shi1, Judith A. Badner1, Chunyu Liu1,2
1Department of Psychiatry, The University of Chicago, Chicago, Illinois, USA
2to Chunyu Liu, Department of Psychiatry, The University of Chicago, 924 East 57th Street, Knapp Center, R012, Chicago, IL 60637, USA

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Tài liệu tham khảo

Abecasis, 2002, Merlin–rapid analysis of dense genetic maps using sparse gene flow trees, Nat Genet, 30, 97, 10.1038/ng786

Barrett, 2005, Haploview: analysis and visualization of LD and haplotype maps, Bioinformatics, 21, 263, 10.1093/bioinformatics/bth457

Baum, 2008, A genome-wide association study implicates diacylglycerol kinase eta (DGKH) and several other genes in the etiology of bipolar disorder, Mol Psychiatry, 13, 197, 10.1038/sj.mp.4002012

Bax, 2006, Development and validation of MIX: comprehensive free software for meta-analysis of causal research data, BMC Med Res Methodol, 6, 50, 10.1186/1471-2288-6-50

Carlson, 2004, Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium, Am J Hum Genet, 74, 106, 10.1086/381000

Cohen, 2005, Low LDL cholesterol in individuals of African descent resulting from frequent nonsense mutations in PCSK9, Nat Genet, 37, 161, 10.1038/ng1509

Cohen, 2004, Multiple rare alleles contribute to low plasma levels of HDL cholesterol, Science, 305, 869, 10.1126/science.1099870

Cohen, 2006, Multiple rare variants in NPC1L1 associated with reduced sterol absorption and plasma low-density lipoprotein levels, Proc Natl Acad Sci USA, 103, 1810, 10.1073/pnas.0508483103

DerSimonian, 1986, Meta-analysis in clinical trials, Control Clin Trials, 7, 177, 10.1016/0197-2456(86)90046-2

Detera-Wadleigh, 1997, Initial genome scan of the NIMH genetics initiative bipolar pedigrees: chromosomes 4, 7, 9, 18, 19, 20, and 21q, Am J Med Genet, 74, 254, 10.1002/(SICI)1096-8628(19970531)74:3<254::AID-AJMG4>3.0.CO;2-Q

Dudbridge, 2003, Pedigree disequilibrium tests for multilocus haplotypes, Genet Epidemiol, 25, 115, 10.1002/gepi.10252

Egger, 1997, Bias in meta-analysis detected by a simple, graphical test, BMJ, 315, 629, 10.1136/bmj.315.7109.629

Fearnhead, 2004, Multiple rare variants in different genes account for multifactorial inherited susceptibility to colorectal adenomas, Proc Natl Acad Sci USA, 101, 15992, 10.1073/pnas.0407187101

Fisher, 1954, Statistical methods for research workers. 12th ed

Horiuchi, 2006, A polymorphism in the PDLIM5 gene associated with gene expression and schizophrenia, Biol Psychiatry, 59, 434, 10.1016/j.biopsych.2005.07.041

Iwamoto, 2004a, Expression of HSPF1 and LIM in the lymphoblastoid cells derived from patients with bipolar disorder and schizophrenia, J Hum Genet, 49, 227, 10.1007/s10038-004-0136-5

Iwamoto, 2004b, Molecular characterization of bipolar disorder by comparing gene expression profiles of postmortem brains of major mental disorders, Mol Psychiatry, 9, 406, 10.1038/sj.mp.4001437

Johnson, 2007, Counting potentially functional variants in BRCA1, BRCA2 and ATM predicts breast cancer susceptibility, Hum Mol Genet, 16, 1051, 10.1093/hmg/ddm050

Kato, 2005, Gene expression and association analyses of LIM (PDLIM5) in bipolar disorder and schizophrenia, Mol Psychiatry, 10, 1045, 10.1038/sj.mp.4001719

Kazeem, 2005, Integrating case–control and TDT studies, Ann Hum Genet, 69, 329, 10.1046/J.1469-1809.2005.00156.x

Maeno-Hikichi, 2003, A PKC epsilon-ENH-channel complex specifically modulates N-type Ca2+ channels, Nat Neurosci, 6, 468, 10.1038/nn1041

Mantel, 1959, Statistical aspects of the analysis of data from retrospective studies of disease, J Natl Cancer Inst, 22, 719

Meyer, 2005, Rare variants of the gene encoding the potassium chloride co-transporter 3 are associated with bipolar disorder, Int J Neuropsychopharmacol, 8, 495, 10.1017/S1461145705005821

Mowry, 2000, Second stage of a genome scan of schizophrenia: study of five positive regions in an expanded sample, Am J Med Genet, 96, 864, 10.1002/1096-8628(20001204)96:6<864::AID-AJMG35>3.0.CO;2-D

Numata, 2007, Gene expression in the peripheral leukocytes and association analysis of PDLIM5 gene in schizophrenia, Neurosci Lett, 415, 28, 10.1016/j.neulet.2007.01.018

O'Connell, 1998, PedCheck: a program for identification of genotype incompatibilities in linkage analysis, Am J Hum Genet, 63, 259, 10.1086/301904

Pritchard, 2001, Are rare variants responsible for susceptibility to complex diseases?, Am J Hum Genet, 69, 124, 10.1086/321272

Pritchard, 2002, The allelic architecture of human disease genes: common disease-common variant … or not?, Hum Mol Genet, 11, 2417, 10.1093/hmg/11.20.2417

Pritchard, 2000, Inference of population structure using multilocus genotype data, Genetics, 155, 945, 10.1093/genetics/155.2.945

Romeo, 2007, Population-based resequencing of ANGPTL4 uncovers variations that reduce triglycerides and increase HDL, Nat Genet, 39, 513, 10.1038/ng1984

Shi, 2007, No evidence for association between 19 cholinergic genes and bipolar disorder, Am J Med Genet B Neuropsychiatr Genet, 144B, 715, 10.1002/ajmg.b.30417

2007, Genome-wide association study of 14 000 cases of seven common diseases and 3000 shared controls, Nature, 447, 661

Ueki, 1999, Isolation, tissue expression, and chromosomal assignment of a human LIM protein gene, showing homology to rat enigma homologue (ENH), J Hum Genet, 44, 256, 10.1007/s100380050155

Warsh, 2004, Role of intracellular calcium signaling in the pathophysiology and pharmacotherapy of bipolar disorder: current status, Clin Neurosci Res, 4, 201, 10.1016/j.cnr.2004.09.012

Wigginton, 2005, PEDSTATS: descriptive statistics, graphics and quality assessment for gene mapping data, Bioinformatics, 21, 3445, 10.1093/bioinformatics/bti529

Zhu, 2005, Haplotypes produced from rare variants in the promoter and coding regions of angiotensinogen contribute to variation in angiotensinogen levels, Hum Mol Genet, 14, 639, 10.1093/hmg/ddi060