Overexpression of Saccharomyces cerevisiae transcription factor and multidrug resistance genes conveys enhanced resistance to lignocellulose-derived fermentation inhibitors
Tài liệu tham khảo
Wyman, 2007, What is (and is not) vital to advancing cellulosic ethanol, Trends Biotechnol, 25, 153, 10.1016/j.tibtech.2007.02.009
Larsson, 1999, The generation of fermentation inhibitors during dilute-acid hydrolysis of softwood, Enzyme Microb Tech, 24, 151, 10.1016/S0141-0229(98)00101-X
Larsson, 1999, Comparison of different methods for the detoxification of lignocellulose hydrolyzates of spruce, Appl Biochem Biotechnol, 77–79, 91, 10.1385/ABAB:77:1-3:91
Palmqvist, 2000, Fermentation of lignocellulosic hydrolysates. II. Inhibitors and mechanisms of inhibition, Bioresour Technol, 74, 25, 10.1016/S0960-8524(99)00161-3
Klinke, 2004, Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass, Appl Microbiol Biotechnol, 66, 10, 10.1007/s00253-004-1642-2
Jönsson, 1998, Detoxification of wood hydrolysates with laccase and peroxidase from the white-rot fungus Trametes versicolor, Appl Microbiol Biotechnol, 49, 691, 10.1007/s002530051233
Martín, 2002, Ethanol production from enzymatic hydrolysates of sugarcane bagasse using recombinant xylose-utilising Saccharomyces cerevisiae, Enzyme Microb Tech., 31, 274, 10.1016/S0141-0229(02)00112-6
Martín, 2002, Comparison of the fermentability of enzymatic hydrolysates of sugarcane bagasse pretreated by steam explosion using different impregnating agents, Appl Biochem Biotechnol, 98–100, 699, 10.1385/ABAB:98-100:1-9:699
Persson, 2002, Effect of different forms of alkali treatment on specific fermentation inhibitors and on the fermentability of lignocellulose hydrolysates for production of fuel ethanol, J Agric Food Chem, 50, 5318, 10.1021/jf025565o
Larsson, 2000, The influence of lignocellulose-derived aromatic compounds on oxygen-limited growth and ethanolic fermentation by Saccharomyces cerevisiae, Appl Biochem Biotechnol, 84–86, 617, 10.1385/ABAB:84-86:1-9:617
Larsson, 2001, Development of Saccharomyces cerevisiae with enhanced resistance to phenolic fermentation inhibitors in lignocellulose hydrolysates by heterologous expression of laccase, Appl Environ Microb, 67, 1163, 10.1128/AEM.67.3.1163-1170.2001
Martín, 2003, Comparison of the resistance of industrial and laboratory strains of Saccharomyces and Zygosaccharomyces to lignocellulose-derived fermentation inhibitors, Enzyme Microb Tech, 32, 386, 10.1016/S0141-0229(02)00310-1
Martinez, 2000, Effects of Ca(OH)(2) treatments (“overliming”) on the composition and toxicity of bagasse hemicellulose hydrolysates, Biotechnol Bioeng, 69, 526, 10.1002/1097-0290(20000905)69:5<526::AID-BIT7>3.0.CO;2-E
Heer, 2008, Identification of furfural as a key toxin in lignocellulosic hydrolysates and evolution of a tolerant yeast strain, Microb Biotechnol, 1, 497, 10.1111/j.1751-7915.2008.00050.x
Taherzadeh, 1997, Acetic acid—friend or foe in anaerobic batch conversion of glucose to ethanol by Saccharomyces cerevisiae?, Chem Eng Sci, 52, 2653, 10.1016/S0009-2509(97)00080-8
Cantarella, 2004, Comparison of different detoxification methods for steam-exploded poplar wood as a substrate for the bioproduction of ethanol in SHF and SSF, Process Biochem, 39, 1533, 10.1016/S0032-9592(03)00285-1
Mohagheghi, 2006, Conditioning hemicellulose hydrolysates for fermentation: effects of overliming pH on sugar and ethanol yields, Process Biochem, 41, 1806, 10.1016/j.procbio.2006.03.028
Delgenes, 1996, Effects of lignocellulose degradation products on ethanol fermentation of glucose and xylose by S. cerevisiae, Z. mobilis, P. stipitis and C. shehatae, Enzyme Microb Technol, 19, 220, 10.1016/0141-0229(95)00237-5
Brandberg, 2004, The fermentation performance of nine strains of Saccharomyces cerevisiae in batch and fed-batch cultures in dilute-acid wood hydrolysate, J Biosci Bioeng, 98, 122, 10.1016/S1389-1723(04)70252-2
Chen, 2009, Screening of oleaginous yeast strains tolerant to lignocellulose degradation compounds, Appl Biochem Biotechnol, 10.1007/s12010-008-8491-x
Liu, 2005, Enhanced biotransformation of furfural and hydroxymethylfurfural by newly developed ethanologenic yeast strains, Appl Biochem Biotechnol, 121–124, 451, 10.1385/ABAB:121:1-3:0451
Martín, 2007, Adaptation of a recombinant xylose-utilizing Saccharomyces cerevisiae strain to a bagasse hydrolysate with high content of fermentation inhibitors, Bioresource Technol, 98, 1767, 10.1016/j.biortech.2006.07.021
Keating, 2006, Tolerance and adaptation of ethanologenic yeasts to lignocellulosic inhibitory compounds, Biotechnol Bioeng, 93, 1196, 10.1002/bit.20838
Kádár, 2007, Ethanol fermentation of various pretreated and hydrolyzed substrates at low initial pH, Appl Biochem Biotechnol, 137–140, 847
Stenberg, 1998, Optimisation of steam pretreatment of SO2-impregnated mixed softwoods for ethanol production, J Chem Technol Biot, 71, 299, 10.1002/(SICI)1097-4660(199804)71:4<299::AID-JCTB858>3.0.CO;2-Z
Nevoigt, 2008, Progress in metabolic engineering of Saccharomyces cerevisiae, Microbiol Mol Biol Rev, 72, 379, 10.1128/MMBR.00025-07
Larsson, 2001, Effect of overexpression of Saccharomyces cerevisiae Pad1p on the resistance to phenylacrylic acids and lignocellulose hydrolysates under aerobic and oxygen-limited conditions, Appl Microbiol Biotechnol, 57, 167, 10.1007/s002530100742
Gorsich, 2006, Tolerance to furfural-induced stress is associated with pentose phosphate pathway genes ZWF1, GND1, RPE1, and TKL1 in Saccharomyces cerevisiae, Appl Microbiol Biotechnol, 71, 339, 10.1007/s00253-005-0142-3
Petersson, 2006, A 5-hydroxymethyl furfural reducing enzyme encoded by the Saccharomyces cerevisiae ADH6 gene conveys HMF tolerance, Yeast, 23, 455, 10.1002/yea.1370
Liu, 2008, Multiple gene-mediated NAD(P)H-dependent aldehyde reduction is a mechanism of in situ detoxification of furfural and 5-hydroxymethylfurfural by Saccharomyces cerevisiae, Appl Microbiol Biotechnol, 81, 743, 10.1007/s00253-008-1702-0
Coleman, 1997, Saccharomyces cerevisiae basic region-leucine zipper protein regulatory networks converge at the ATR1 structural gene, J Biol Chem, 272, 23224, 10.1074/jbc.272.37.23224
Jungwirth, 2000, Diazaborine resistance in yeast involves the efflux pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1, Eur J Biochem, 267, 4809, 10.1046/j.1432-1327.2000.01537.x
Herrero, 2008, Redox control and oxidative stress in yeast cells, Biochim Biophys Acta, 1780, 1217, 10.1016/j.bbagen.2007.12.004
Sambrook, 2001
Saloheimo, 1994, A novel, small endoglucanase gene, egl5, from Trichoderma reesei isolated by expression in yeast, Mol Microbiol, 13, 219, 10.1111/j.1365-2958.1994.tb00417.x
Hoffman, 1987, A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli, Gene, 57, 267, 10.1016/0378-1119(87)90131-4
la Grange, 1996, Expression of a Trichoderma reesei xylanase gene (XYN2) in Saccharomyces cerevisiae, Appl Environ Microbiol, 62, 1036, 10.1128/AEM.62.3.1036-1044.1996
Monteiro, 1994, The in vivo activation of Saccharomyces cerevisiae plasma membrane H+-ATPase by ethanol depends on the expression of the PMA1 gene, but not of the PMA2 gene, Yeast, 10, 1439, 10.1002/yea.320101107
Kanazawa, 1988, ATR1, a Saccharomyces cerevisiae gene encoding a transmembrane protein required for aminotriazole resistance, Mol Cell Biol, 8, 664, 10.1128/MCB.8.2.664
Mack, 1988, Genetic characterization of hyperresistance to formaldehyde an 4-nitroquinoline-N-oxide in the yeast Saccharomyces cerevisiae, Mol Gen Genet, 211, 260, 10.1007/BF00330602
Akada, 2002, Use of a YAP1 overexpression cassette conferring specific resistance to cerulenin and cycloheximide as an efficient selectable marker in the yeast Saccharomyces cerevisiae, Yeast, 19, 17, 10.1002/yea.797
Alarco, 1997, AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily, J Biol Chem, 272, 19304, 10.1074/jbc.272.31.19304
Nguyên, 2001, Multiple Yap1p-binding sites mediate induction of the yeast major facilitator FLR1 gene in response to drugs, oxidants, and alkylating agents, J Biol Chem, 276, 1138, 10.1074/jbc.M008377200
Alriksson, 2006, Optimal conditions for alkaline detoxification of dilute-acid lignocellulose hydrolysates, Appl Biochem Biotechnol, 129–132, 599, 10.1385/ABAB:130:1:599
Wiatrowski, 2003, Yap1p accumulates in the nucleus in response to carbon stress in Saccharomyces cerevisiae, Eukaryot Cell, 2, 19, 10.1128/EC.2.1.19-26.2003
Tenreiro, 2001, Transcriptional activation of FLR1 gene during Saccharomyces cerevisiae adaptation to growth with benomyl: role of Yap1p and Pdr3p, Biochem Biophys Res Co, 280, 216, 10.1006/bbrc.2000.4100
Brôco, 1999, FLR1 gene (ORF YBR008c) is required for benomyl and methotrexate resistance in Saccharomyces cerevisiae and its benomyl-induced expression is dependent on pdr3 transcriptional regulator, Yeast, 15, 1595, 10.1002/(SICI)1097-0061(199911)15:15<1595::AID-YEA484>3.0.CO;2-6
Oskouian, 1999, YAP1 confers resistance to the fatty acid synthase inhibitor cerulenin through the transporter Flr1p in Saccharomyces cerevisiae, Mol Gen Genet, 261, 346, 10.1007/s004380050975
Isoyama, 2001, Nuclear import of the yeast AP-1-like transcription factor Yap1p is not mediated by transport receptor Pse1p, and this import step is not affected by oxidative stress, J Biol Chem, 276, 21863, 10.1074/jbc.M009258200
Dumond, 2000, A large-scale study of Yap1p-dependent genes in normal aerobic and H2O2-stress conditions: the role of Yap1p in cell proliferation control in yeast, Mol Microbiol, 36, 830, 10.1046/j.1365-2958.2000.01845.x
Maeta, 2004, Activity of the Yap1 transcription factor in Saccharomyces cerevisiae is modulated by methylglyoxal, a metabolite derived from glycolysis, Mol Cell Biol, 24, 8753, 10.1128/MCB.24.19.8753-8764.2004
Lucau-Danila, 2005, Early expression of yeast genes affected by chemical stress, Mol Cell Biol, 25, 1860, 10.1128/MCB.25.5.1860-1868.2005
Kim, 2006, Genome-wide expression analyses of adaptive response against medadione-induced oxidative stress in Saccharomyces cerevisiae KNU5377, Process Biochem, 41, 2305, 10.1016/j.procbio.2006.06.005
Taherzadeh, 1997, Characterization and fermentation of dilute-acid hydrolyzates from wood, Ind Eng Chem Res, 36, 4659, 10.1021/ie9700831