Optimized DNA microarray assay allows detection and genotyping of single PCR-amplifiable target copies

Molecular and Cellular Probes - Tập 20 Số 1 - Trang 60-63 - 2006
Ralf Ehricht1, Peter Slickers1, Stefanie Goellner2, Helmut Hotzel2, Konrad Sachse2
1Clondiag Chip Technologies GmbH, Loebstedter Str. 105, 07743 Jena, Germany.
2Institute of Bacterial Infections and Zoonoses at the Federal Research Institute for Animal Health (Friedrich-Loeffler-Institut), Naumburger Str. 96a, 07743 Jena, Germany

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Lucchini, 2001, Microarrays for microbiologists, Microbiology, 147, 1403, 10.1099/00221287-147-6-1403

Perreten, 2005, Microarray-based detection of 90 antibiotic resistance genes of gram-positive bacteria, J Clin Microbiol, 43, 2291, 10.1128/JCM.43.5.2291-2302.2005

Monecke S. Ehricht R. Rapid genotyping of methicillin resistant Staphylococcus aureus isolates using miniaturised oligonucleotide arrays. Clin Microbiol Infect; in press.

Al-Khaldi, 2005, Genotyping of Clostridium perfringens toxins using multiple oligonucleotide microarray hybridization, Mol Cell Probes, 18, 359, 10.1016/j.mcp.2004.05.006

Kim, 2004, Development of a DNA microarray chip for the identification of sludge bacteria using an unsequenced random genomic DNA hybridization method, Environ Sci Technol, 38, 6767, 10.1021/es035398o

Roth, 2004, Use of an oligonucleotide array for laboratory diagnosis of bacteria responsible for acute upper respiratory infections, J Clin Microbiol, 42, 4268, 10.1128/JCM.42.9.4268-4274.2004

Sachse, 2005, DNA microarray-based detection and identification of Chlamydia and Chlamydophila spp, Mol Cell Probes, 19, 41, 10.1016/j.mcp.2004.09.005

Rödel, 2000, Production of basic fibroblast growht factor and interleukin 6 by human smooth muscle cells following infektion with Chlamydia penumoniae, Infect Immun, 68, 3635, 10.1128/IAI.68.6.3635-3641.2000

Everett, 1999, Rapid detection of the Chlamydiaceae and other families in the order Chlamydiales: three PCR tests, J Clin Microbiol, 37, 575, 10.1128/JCM.37.3.575-580.1999

Bao, 2005, SNP identification in unamplified human genomic DNA with gold nanoparticle probes, Nucleic Acids Res, 33, e15, 10.1093/nar/gni017

Storhoff, 2004, Gold nanoparticle-based detection of genomic DNA targets on microarrays using a novel optical detection system, Biosens Bioelectron, 19, 875, 10.1016/j.bios.2003.08.014

Taton, 2000, Scanometric DNA array detection with nanoparticle probes, Science, 289, 1757, 10.1126/science.289.5485.1757

Tiquia, 2004, Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples, Biotechniques, 36, 664, 10.2144/04364RR02

Cho, 2002, Quantitative detection of microbial genes by using DNA microarrays, Appl Environ Microbiol, 68, 1425, 10.1128/AEM.68.3.1425-1430.2002

Panicker, 2004, Detection of pathogenic Vibrio spp. in shellfish by using multiplex PCR and DNA microarrays, Appl Environ Microbiol, 70, 7436, 10.1128/AEM.70.12.7436-7444.2004