Optimization of phytoplankton monitoring in the Baltic Sea

Andrejev, 2004, Mean circulation and water exchange in the Gulf of Finland – a study based on three-dimensional modelling, Boreal Environ. Res., 9, 1 Borja, 2013, Marine monitoring during an economic crisis: the cure is worse than the disease, Mar. Pollut. Bull., 68, 1, 10.1016/j.marpolbul.2013.01.041 Borja, 2008, Overview of integrative tools and methods in assessing ecological integrity in estuarine and coastal systems worldwide, Mar. Pollut. Bull., 56, 1519, 10.1016/j.marpolbul.2008.07.005 Carstensen, 2015, Phytoplankton blooms in estuarine and coastal waters: seasonal patterns and key species, Estuar. Coast. Shelf Sci., 162, 98, 10.1016/j.ecss.2015.05.005 Clarke, 2015 Clarke, 2006, On resemblance measures for ecological studies, including taxonomic dissimilarities and a zero-adjusted Bray-Curtis coefficient for denuded assemblages, J. Exp. Mar. Biol. Ecol., 330, 55, 10.1016/j.jembe.2005.12.017 Cloern, 1996, Phytoplankton bloom dynamics in coastal ecosystems: a review with some general lessons from sustained investigation of San Francisco Bay, California, Rev. Geophys., 2534, 127, 10.1029/96RG00986 Cloern, 2013, Review: phytoplankton primary production in the world's estuarine-coastal ecosystems, Biogeosci. Discuss., 10, 17725, 10.5194/bgd-10-17725-2013 Dromph, 2013, Sources of uncertainty in assessment of marine phytoplankton communities, Hydrobiologia, 704, 253, 10.1007/s10750-012-1353-0 ESRI, 2010 European Commission, 2010, Commission decision of 1 September 2010 on criteria and methodological standards on good environmental status of marine waters (notified under document C(2010) 5956) (2010/477/EU), Off. J. Eur. Union, L232, 12 Finni, 2001, The history of cyanobacterial blooms in the Baltic Sea, Ambio, 30, 172, 10.1579/0044-7447-30.4.172 Gasiùnaite, 2005, Seasonality of coastal phytoplankton in the Baltic Sea: influence of salinity and eutrophication, Estuar. Coast. Shelf Sci., 65, 239, 10.1016/j.ecss.2005.05.018 Griffiths, 2015, Phytoplankton community interactions and environmental sensitivity in coastal and offshore habitats, Oikos Harrison, 2015, Cell volumes of marine phytoplankton from globally distributed coastal data sets, Estuar. Coast. Shelf Sci., 162, 130, 10.1016/j.ecss.2015.05.026 HELCOM HELCOM PEG, 2013 Hunt, 2008, Application of statistical modeling to optimize a coastal water quality monitoring program, Environ. Monit. Assess., 137, 505, 10.1007/s10661-007-9785-0 Jaanus, 2009, Potential phytoplankton indicator species for monitoring Baltic coastal waters in the summer period, Hydrobiologia, 629, 157, 10.1007/s10750-009-9768-y Klais, 2011, Decadal-scale changes of dinoflagellates and diatoms in the anomalous Baltic Sea spring bloom, PLoS One, 6, e21567, 10.1371/journal.pone.0021567 Leppänen, 1994, Monitoring the temporal and spatial distribution of a spring bloom in the eutrophication of the Gulf of Finland. Patchiness in the Baltic Sea, ICES Cooperative Research Reports, 201, 63 Lewandowska, 2010, Climate change and the spring bloom: a meso-cosm study on the influence of light and temperature on phytoplankton and mesozooplankton, Mar. Ecol. Prog. Ser., 405, 101, 10.3354/meps08520 Lips, 2008, Abiotic factors influencing cyanobacterial bloom development in the Gulf of Finland (Baltic Sea), Hydrobiologia, 614, 133, 10.1007/s10750-008-9449-2 Lips, 2014, High-resolution dynamics of the spring bloom in the Gulf of Finland of the Baltic Sea, J. Mar. Syst., 129, 135, 10.1016/j.jmarsys.2013.06.002 Ojamäe, 2016, Mass entrapment and lysis of Mesodinium rubrum cells in mucus threads observed in cultures with Dinophysis, Harmful Algae, 55, 77, 10.1016/j.hal.2016.02.001 Olenina, 2006, 106 Olli, 2015, Diversity of coastal phytoplankton assemblages – cross ecosystem comparison, Estuar. Coast. Shelf Sci., 162, 110, 10.1016/j.ecss.2015.03.015 Paerl, 2006, Anthropogenic and climatic influences on the eutrophication of large estuarine ecosystems, Limnol. Oceanogr., 51, 448, 10.4319/lo.2006.51.1_part_2.0448 Soomere, 2008, The progress in knowledge of physical oceanography of the Gulf of Finland: a review for 1997–2007, Oceanologia, 50, 287 Suikkanen, 2007, Long-term changes in summer phytoplankton communities of the open northern Baltic Sea, Estuar. Coast. Shelf Sci., 71, 580, 10.1016/j.ecss.2006.09.004 Utermöhl, 1958, Zur Vervollkommnung der quantitativen Phytoplankton-Methodik, Mitteilungen der Internationalen Vereinigung für Theoretische und Angewandte Limnologie, 9, 1 Wänstrand, 2006, Phytoplankton community dynamics assessed by ships-of-opportunity sampling in the northern Baltic Sea: a comparison of HPLC pigment analysis and cell counts, Estuar. Coast. Shelf Sci., 66, 135, 10.1016/j.ecss.2005.08.003 Wasmund, 2008, Phytoplankton, 441 Wickham, 2007, Reshaping Data with the reshape Package, J. Stat. Softw., 21, 1, 10.18637/jss.v021.i12