Nonintercalating DNA-binding ligands: Specificity of the interaction and their use as tools in biophysical, biochemical and biological investigations of the genetic material
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Aggarwal, 1985, Nucleic acid binding drugs. Part XIII. Molecular motion in a drug-nucleic acid model system: thermal motion analysis of a proflavine-dinucleoside crystal structure, Nucl. Acid. Res., 13, 5671, 10.1093/nar/13.15.5671
Aivasashvili, 1984, Sequence specific inhibition of synthesis and pyrophosphorolysis of RNA with olivomycin. Abstract 16, 408
Arai, 1977, A new antibiotics, saframycins A, B, C, D and E, J. Antibiot., 30, 1015, 10.7164/antibiotics.30.1015
Arai, 1980, Increased production of saraframycin A and isolation of saframycin S, J. Antibiot., 33, 951, 10.7164/antibiotics.33.951
Arcamone, 1972, On distamycin A and related compounds, selective antiviral agents, 29
Arcamone, 1957, Verfahre zur Herstellung und Gewinnung von Antibiotika
Arcamone, 1958
1961, Chem. Abstr., 55, 2012
Arcsmone, 1967, Distamycina A. Nota I. Isolamento e struttutra dell'agente antivirale distamycina A, Gazz. chim. italiana, 97, 1097
Arcamone, 1969, Distamycina A. Nota III. Sintesi di analogi contenenti modificazioni nelle catene laterali, Gazz. chim. italiana, 99, 620
Arcamone, 1969, Distamycina A. Nota IV. Sintesi di analogi con diverso numero di resti dell'acido 1-methyl-4-ammino-pirrolo-2-carbossilico, Gazz chim. italiana, 99, 632
Atwell, 1967, Potential antitumor agents. V. Bisquaternary salts, J. Med. Chem., 10, 706, 10.1021/jm00316a041
Baguley, 1982, Nonintercalative DNA-binding antitumor compounds, Molec. cell. Biochem., 43, 167, 10.1007/BF00223008
Bates, 1969, Studies on the mechanism of action of anthramycin methyl ether, a new antitumor antibiotic, Cancer Res., 29, 2195
Bauer, 1978, On the kinetics of DNA-netropsin interaction, Studia Biophys., 67, 51
Behr, 1969, Interaction of the RNA polymerase inhibitor chromomycin with DNA, Eur. J. Biochem., 9, 82, 10.1111/j.1432-1033.1969.tb00579.x
Bennett, 1982, Formation of alkali labile linkages in DNA by hedamycin and uise of hedamycin as a probe of protein-DNA complexes, Nucl. Acids. Res., 10, 4581, 10.1093/nar/10.15.4581
Berman, 1979, Netropsin, a DNA-binding oligopeptide. Structural and binding studies, Biochim. biophys. Acta, 561, 124, 10.1016/0005-2787(79)90496-9
Bhat, 1977, Extrinsic Cotton effect and helix-coil transition in DNA-polycation complex, Bioplymers, 16, 1713, 10.1002/bip.1977.360160808
Bhuyan, 1981, CC-1065 (NSC 298223), a most potent antitumor agent: biological activity, cell-kill and DNA synthesis inhibition kinetics, 22, 24
Bierzynski, 1978, Studies of the specific binding to DNA of diamidinophenyl-indole (DAPI), Studia Biophys., 67, 57
Biggs, 1964, Muscle-relaxant properties of steroid bis-quaternary ammoniun salt, Experientis, 20, 119, 10.1007/BF02150684
Bontemos, 1975, Physico-chemical study of the complexes of ‘33258 Hoechst’ with DNA and nucleohistone, Nucl. Acids Res., 2, 971, 10.1093/nar/2.6.971
Brabec, 1982, The effect of netropsin on the electrochemical oxidation of DNA at a graphite electrode, Biochem. Bionerg., 9, 245, 10.1016/0302-4598(82)80014-7
Braga, 1976, The use of antibiotics actinomycin D and distamycin A for mapping of phage lambda Hnd III fragments, FEBS Lett., 70, 91, 10.1016/0014-5793(76)80733-8
Brahms, 1985, Activation and inhibition of transcription by supercoiling, J. molec. Biol., 181, 455, 10.1016/0022-2836(85)90419-X
Braithwaite, 1980, Existence of an extended series of antitumor compounds which bind to DNA by nonintercalative means, Biochemistry, 19, 1101, 10.1021/bi00547a009
Brown, 1976, The structures and fidelity of replication of mouse mitochondrial DNA pSc101 EcoR1 recombinant plasmids grown in E.coli K12, Cell, 7, 517, 10.1016/0092-8674(76)90202-6
Burckhardt, 1984, Interaction of the nonintercalating drugs SN-16814 and SN-13232 with DNA
Burchardt, 1983, Studies on histone H1 condensing properties in complexes with DNA and polydeoxyribonucleotides using netropsin as a probe, Biomed. biochim. Acta, 42, 867
Burckhardt, 1985, Two binding modes of netropsin are involved in the complex formation with poly(dA-dT)·poly(dA-dT) and other alternating duplex polymers, J. Biomelec. Struct. Dynam., 2, 721, 10.1080/07391102.1985.10506319
Cain, 1969, Potential antitumor agents. X. Bisquaternary salts, J. Med. Chem., 12, 199, 10.1021/jm00302a001
Calladine, 1982, Mechanisms of sequence-dependent stacking of bases in BDNA, J. molec. Biol., 161, 343, 10.1016/0022-2836(82)90157-7
Carvlin, 1983, Intercalative and nonintercalative binding of large cationic porphyrin ligands to porphyrin ligands to calf thymus DNA, Nucl. Acid. Res., 11, 6121, 10.1093/nar/11.17.6121
Carvlin, 1983, Intercalative and nonintercalative binding of large cationic porphyrin ligands to polynucleotides, Nucl. Acid. Res., 11, 6141, 10.1093/nar/11.17.6141
Chaconas, 1979, The interaction og restriction enodonuclease Hha I with its recognition site, 44
Chandra, 1979, Molecular mechanism of action of diamidinephenylindole (DAPI). III. Physico-chemical binding of DAPI and its derivatives to DNA and polydeoxynucleotides and its consequences on the template activity of the nucleic acids, Cell. molec. Biol., 25, 429
Chandra, 1970, Effect of distamycin A on the structure and template activity of DNA in RNA polymerase system, FEBS Lett., 7, 90, 10.1016/0014-5793(70)80626-3
Chandra, 1971, Some structural requirements for the antibiotic action of distamycins, FEBS Lett., 16, 249, 10.1016/0014-5793(71)80362-9
Chandra, 1972, Some structural requirements for the antibiotic action of distamycins. II. Structural modification of the side chains in distamycin A molecule, FEBS Lett., 19, 327, 10.1016/0014-5793(72)80072-3
Chandra, 1972, Some structural requirements for the antibiotic action of distamycins. III. Possible interaction of formyl group of distamycin side chain with adenine, Hoppe-Seyler's Z. Physiol. Chem., 353, 393, 10.1515/bchm2.1972.353.1.393
Chandra, 1972, Template specific inhibition of DNA polymerases from RNA tumor viruses by distamycin A and its structural analogs, FEBS Lett., 21, 154, 10.1016/0014-5793(72)80126-1
Chandra, 1976, Inhibitors of DNA synthesis in RNA tumor viruses: biological implications and their mode of action, Prog. molec. subcell. Biol., 4, 167, 10.1007/978-3-642-66249-2_6
Chandra, 1977, Chemical inhibitors of oncornaviral DNA polymerases: biological implications and their mode of action, Pharmac. Ther., A 1, 231
Chen, 1983, Adriamycin inhibits the B to Z transition of poly(dGm5dC)·poly(dGm5dC), Biochemistry, 22, 5468, 10.1021/bi00293a002
Chidester, 1981, The structure of CC-1065, a potent antitumor agent, and its binding to DNA, J. Am. Chem. Soc., 103, 7629, 10.1021/ja00415a035
Comimgs, 1975, Mechanism of chromosome banding. VIII. Hoechst 33258-DNA interaction, Chromosoma, 52, 229
Cosar, 1952, Activite trypanocide d'un antibiotique produit par un Streptomyces, C.r. Acad. Sci,, 234, 1498
Crothers, 1984, Effects of DNA-binding drugs on transcription, 104, 121
Damaschun, 1984, Investigations of DNA-netropsin and DNA-protein interactions by x-ray scattering, Studia Biophys., 104, 273
Dattagupta, 1978, Does irehdiamine kink DNA, 75, 4286
Dattagupta, 1980, Insteraction of neptrosin and distamycin with DNA: Electric dichroism study, Biochemistry, 19, 5998, 10.1021/bi00567a009
Dave, 1977, Studies on the structure-activity relationship among aliphatic and aromatic bisguanyl-hydrazones and some related compounds, Chem. Biol. Interact., 16, 57, 10.1016/0009-2797(77)90153-3
Davis, 1967, Steroid Amines. Part IV. 3, 17-Diaminoandrostane derivatives, J. Chem. Soc. C, 1045, 10.1039/j39670001045
Day, 1978, Circular dihcroic probes for aspects of chromatin structure: Aromatic polycationic ionen probes, Biochem. biophys. Res. Commun., 84, 967, 10.1016/0006-291X(78)91678-9
De Clerq, 1980, Diaryl amidine derivatives as oncornaviral DNA polymerase inhibitors, J. Med. Chem., 23, 787, 10.1021/jm00181a016
Denny, 1979, Potential antitumor agents. 31. Quantitative structure-activity relationships for the antileukemic bis(guanylhydrozones), J. Med. Chem., 22, 1234, 10.1021/jm00196a016
Denny, 1979, Potential antitumor agents. 29. Quantitative structure-activity relationship for the antileukemic bisquaternary ammonium heterocytes, J. Med. Chem., 22, 134, 10.1021/jm00188a005
Dickerson, 1983, The DNA helix and how it is read, Sci. Am., 249, 3, 10.1038/scientificamerican1283-94
Dickerson, 1981, Structure of B-DNA dodecamer II. Influence of base sequence on helix structure, J. Mol. Biol., 149, 761, 10.1016/0022-2836(81)90357-0
Dickerson, 1985, Nuclear Overhauser data and stereochemical considerations suggest that netropsin binds specifically within the minor groove of poly(dA)·poly(dT), forming hydrogen bonds with both strands of the double helix, J. Biomolec. Struct. Dyn., 2, 423, 10.1080/07391102.1985.10508431
Dolfini, 1983, High resolution of heterochromatin of Drosophila melanogasters by distamycin A, Experientia, 39, 1402, 10.1007/BF01990127
Drew, 1981, Structure of a B-DNA dodecamer III. Geometry of hydration, J. Molec. Biol., 151, 535, 10.1016/0022-2836(81)90009-7
Drew, 1985, Structural junctions in DNA: the influence of flanking sequence on nuclease digestion specificities, Nucl. Acids Res., 13, 4445, 10.1093/nar/13.12.4445
Drew, 1980, High salt d(GpGpCpG): A lefthanded Z-DNA double helix, Nature, 286, 567, 10.1038/286567a0
Drlica, 1984, Biology of bacterial DNA topoisomerases, Microbiol. Rev., 48, 273, 10.1128/MR.48.4.273-289.1984
Dudnik, 1973, Interaction of sibitomycin with DNA: Conformational changes and stabilization of DNA helical structure, Antibiotiki, 18, 895
Evdokimov, 1977, A compact form of DNA in solution. 9. Some peculiarities of the CD spectra of DNA compact particles, formed in PEG-containing water-salt solutions in the presence of distamycin A, Mol. Biol. (USSR), 11, 42
Fegion, 1984, Interactions of antitumor drugs with natural DNA: 1HNMR study of binding mode and kinetics, J. Med. Chem., 27, 450, 10.1021/jm00370a007
Ferguson, 1983, Induction of petite mutants in yeast by non-intercalative DNA binding antitumor agents, Eur. J. Cancer clin. Oncol., 19, 1043, 10.1016/0277-5379(83)90089-5
Festy, 1979, Hydroxystilbamidne, 223
Festy, 1973, Hydroxystilbamidine. A nonintercalating drug as a probe of nucleic acid conformation, Biochemistry, 12, 4827, 10.1021/bi00748a003
Festy, 1975, Interaction between hydroxystilbamidine and DNA. I. Binding isotherms and thermodynamics of the association, Biochim. Biophys. Acta, 407, 24, 10.1016/0005-2787(75)90021-0
Fiers, 1962, The structure of the DNA of bacteriophage øX174. III. Ultracentrifugal evidence for a ring structure, J. molec. Biol., 5, 424, 10.1016/S0022-2836(62)80031-X
Finlay, 1951, Netropsin, a new antibiotic produced by a Streptomyces, J. Am. Chem. Soc., 73, 341, 10.1021/ja01145a113
Ford, 1984, Effect of ligand binding on the density of DNA in Nycodenz gradients, Nucl. Acid Res., 12, 1219, 10.1093/nar/12.2.1219
Forterre, 1985, High positive supercoiling in vitro catalyzed by an ATP and polyethylene glycol-stimulated topoisomerase from Sulfolobus acido-caldarius, EMBO J., 4, 2123, 10.1002/j.1460-2075.1985.tb03902.x
Fox, 1984, DNA structural variation produced by actinomycin and distamcyin as revealed by DNase I footprinting, Nucl. Acid Res., 12, 9271, 10.1093/nar/12.24.9271
Frederick, 1984, Kinked DNA-drug and DNA-protein interactions as revealed by nuclear magnetic resonance, Studia Biophysica, 85, 141
Fritzsche, 1983, 1H NMR study of the interaction of the peptide antibiotic netropsin with the miniduplexes d(pApT)3·d(pApT)3 and d(pA)6·d(pT)6, Studia Biophys., 97, 43
Fritzsche, 1984, Infrared kinear dichroism of oriented DNA and DNA-ligand complexes prepared with the wet spinning method, Nucl. Acids Res., 12, 7177, 10.1093/nar/12.23.9165
Gabbay, 1971, Topography of nucleic acid helices in solutions. PMR studies of the interaction specificities of steroidal amines with nucleic acid systems, Biochemistry, 10, 1665, 10.1021/bi00785a026
Gatti, 1976, Characterization of Drosophila heterochromatin I. Staining and decondensation with Hoechst 33258 and Quinacrine, Chromosoma, 57, 351, 10.1007/BF00332160
Gause, 1967, Chromomycin A3, olivomycin, mithramycin, 246
Gause, 1975, Olivomycin, Chromomycin and Mithramycin, 197
Gause, 1975, Sibiromycin, 269
Gause, 1972, Mechanism of action of antitumor antibiotic sibiromycin, Advances in Antimicrobial and Antineoplastic Chemotherapy, Vol. 1/2, 87
Gause, 1972, Inhibition of synthesis of nucleic acids by antitumor antibiotic sibiromycin, Antibiotiki, 17, 413
Goldberg, 1971, Antibiotics and nucleic acids, A. Rev. Biochem., 40, 775, 10.1146/annurev.bi.40.070171.004015
Goppelt, 1981, The effect of several nucleic acid binding drugs on the cleavage of d(GGAATTCC) and pBR322 by the Eco RI restriction endonuclease, Nucl. Acids. Res., 9, 6115, 10.1093/nar/9.22.6115
Gorman, 1974, A method of indirect mutant selection in Physarum polycephalium using the antibiotic netropsin, Molec. gen. Genet., 133, 345, 10.1007/BF00332710
Gresh, 1984, A theoretical study of the relative affinities of an aliphatic and an aromatic bisguanylhydrazone for the minor groove of double-stranded (dA-dT)n oligomers, Theoret. Chim. Acta, 64, 383, 10.1007/BF00548948
Gresh, 1984, A theoretical study of the nonintercalative binding of berenil and stilbamidine to double-stranded (dA-dT)n oligomers, J. molec. Pharmac.
Grokhovsky, 1975, DNA base pair specific ligands. I. Synthesis of distamycin A and its analogs with different number of N-methyl- and N-propylpyrrole residues, Bioorgan. Khim., 1, 1616
Grokhovsky, 1978, DNA base pair specific ligands. III. Synthesis of dansyl analogs of distamycin A, Bioorgan. Khim., 4, 1078
Grokhovsky, 1982, DNA base pair sequence specific ligands. VII. Synthesis of the distamycin A analogs consisting of two or three N-isoamylpyrrolcarboxamide fragments and the analog containing methylamide bonds in the molecule, Bioorgan. Khim., 8, 1070
Groner, 1984, DNA sequences involved in the regulation of gene expression by glucocorticoid hormones, Biochim. Biophys. Acta, 781, 1, 10.1016/0167-4781(84)90116-7
Grunicke, 1976, Mechanism of action of distamycin A and other antibiotics with antiviral activity, Rev. Physiol. Biochem. Pharmac., 69, 10.1007/BFb0030485
Gulati, 1974, Conditions for using DNA polymerase I as an RNA-dependent DNA polymerase, 71, 1035
Gupta, 1984, Structure and dynamics of netropsin-poly(dA-dT) complex: 500 MHz 1H-NMR studies, J. Biomolec. Struct. Dyn., 1, 1457, 10.1080/07391102.1984.10507530
Gurskaya, 1978, Crystal and molecular structure of the analog of distamycin A, Dokl. Akad. Nauk SSSR, 243, 645
Gurskaya, 1979, DNA-binding antibiotics. X-ray structure of the distamycin A analog, Biochim. biophys. Acta, 563, 336, 10.1016/0005-2787(79)90052-2
Gursky, 1984, Thermodynamic and sterochemical aspects of binding interactions between sequence-specific ligands and DNA, Sov. Sci. Rev. D Physicochem. Biol., 5, 53
Gursky, 1976, A code controlling specific binding of regulatory proteins to DNA, Molec. Biol. Rep., 2, 413, 10.1007/BF00366264
Gursky, 1977, A code controlling specific binding of proteins to double helical DNA and RNA, 189
Gursky, 1979, Complementarity and recognition code between regulatory proteins and DNA, 23
Gursky, 1983, Synthetic sequence-specific ligands, 47, 367
Guttmann, 1976, Base composition heterogeneity of mammalian DNA's in CsCl-netropsin, Nucl. Acids Res., 3, 835, 10.1093/nar/3.3.835
Hahn, 1975, Distamycin A and netropsin, 79
Hahn, 1977, Distamycins and netropsin as inhibitors of RNA and DNA polymerases, Vol. 1, 475
Hahn, 1971, Complex of DNA with the antibiotic, distamycin A, 30, 1095
Hanka, 1978, CC-1065(NSC-298223), a new antitumor antibiotic, J. Antibiot., 31, 1211, 10.7164/antibiotics.31.1211
Harshman, 1985, Molecular recognition of B-DNA by Hoechst 33258, Nucl. Acids Res., 13, 4825, 10.1093/nar/13.13.4825
Hartmann, 1968, Antibiotics als Hemmstoffe der Nucleinsäure- und Protein-synthese, Angew. Chem., 80, 710, 10.1002/ange.19680801803
Haruna, 1970, Specific inhibitors for RNA replicase, 2, 796
Hashimoto, 1979, Effect of some antibiotics on eukaryotic DNA methylation in vitro and in vivo, Hoppe-Seyler's Z. Physiol. Chem., 360, 1509
Haupt, 1971, Wirkung von Netropsin auf das Wachstum, die Nucleisäure- und Proteinbiosynthetase von E. coli, Z. Allg. Microbiol., 11, 457
Helene, 1982, Interactions between functional groups in protein- nucleic acid associations, Prog. Biophys. molec. Biol., 39, 1, 10.1016/0079-6107(83)90013-5
Helene, 1981, Interactions of oligopeptides with nucleic acids, CRC Crit. Rev. Biochem., 10, 213, 10.3109/10409238109113600
Herztberg, 1982, Cleavage of double helical DNA by methidiumpropyl-EDTA-iron (II), J. Am. Chem. Soc., 104, 313, 10.1021/ja00365a069
Hilwig, 1973, Decondensation of constitutive heterochromatin in L cell chromosomes by a benzimidazole compound (33258 Hoechst), Exp. Cell Res., 81, 474, 10.1016/0014-4827(73)90537-5
Höhne, 1983, New interpretation and uniform description of secondary structures in proteins, Studia biophys., 98, 85
Honikel, 1972, A model for the in vitro inhibition of the DNA polymerase reaction with the base specific antibiotics chromomycin-A3, actinomycin-C3 and daunomycin, Biochim. biophys. Acta, 269, 354, 10.1016/0005-2787(72)90122-0
Horwitz, 1971, Chemosterilizant action of anthramycin: a proposed mechanism, Science, 174, 159, 10.1126/science.174.4005.159
Hurley, 1977, Pyrrole (1,4)benzodiazepine antitumor antibiotics. Comparative aspects of anthramycin, tomaymycin and sibiromycin, J. Antibiot., 30, 349, 10.7164/antibiotics.30.349
Hurley, 1984, Reaction of CC-1065 with DNA. Structure of the covalent adduct and DNA sequence specificity, Science, 226, 843, 10.1126/science.6494915
Hurley, 1984, Determination of the structure of the CC-DNA adduct and its DNA sequence specificity, Report on X. Jena Symposia on Biophysical Chemistry, Weimar, Abstr., 27
Ishiguro, 1978, Mode of action of saframycin A, a novel heterocyclic quinone antibiotic. Inhibition of RNA synthesis in vivo and in vitro, Biochemistry, 17, 2545, 10.1021/bi00606a014
Ishiguro, 1981, Binding of saframycin Am a heterocyclic quinone antitumor antibiotic to DNA as revealed by the use of the antibiotic labeled with [4C] tyrosine or [14C] cyanide, J. Biol. Chem., 256, 2162, 10.1016/S0021-9258(19)69754-1
Ivanov, 1974, The B to A transitions DNA in solution, J. molec. Biol., 87, 817, 10.1016/0022-2836(74)90086-2
Jaros-Kamiński, 1981, Comparison of inhibitory effect of various drugs on yeast and bacterial RNA polymerases, Studia Biophys., 86, 211
Jayaraman, 1982, Localization of (dA·dT)-rich sequences in the membrane-bound DNA and their possible role in sporulation of Bacillus polymyxa, Mol. Gen. Genet., 185, 158, 10.1007/BF00333807
Jeffrey, 1982, Hydrogen-bonding in amino acids an carbohydrates, 135
Jensen, 1977, Strategies for choosing a DNA stain for flow cytometry of metaphase chromosomes, J. Histochem. Cytochem., 25, 954, 10.1177/25.8.70463
Jernigan, 1978, Bindimg of hedamycin to deoxyribonucleic acid and chromatin of tests and liver, Biochemistry, 17, 4232, 10.1021/bi00613a019
Joel, 1970, The inhibitors of RNA and DNA polymerase by hedamycin, Biochim. biophys. Acta, 224
Jorgenson, 1978, The use of base pair specific DNA agents as affinity labels for the study of mammalian chromosomes, Chromosoma, 68, 287, 10.1007/BF00327164
Julia, 1963, Structure et synthese de la congicidine, Comp. Rend., 257, 1115
Kania, 1976, Use of sequence-specific DNA-binding ligand to probe the environments of EcoRI restriction endonuclease cleavage sites, Eur. J. Biochem., 67, 367, 10.1111/j.1432-1033.1976.tb10700.x
Kaplan, 1982, Variation in the inhibition of restriction enzyme cleavage of lambda phage DNA produced by two covalent binding antitumor agents: anthramycin and mitomycin C, Biochem. Biophys. Res. Commun., 109, 639, 10.1016/0006-291X(82)91988-X
Kaziro, 1967, Mechanism of action of chromomycin A3. II. Inhibition of RNA polymerase reaction, J. Biochem., 62, 424, 10.1093/oxfordjournals.jbchem.a128685
Keilman, 1975, Selective inhibition of sporulation of Bacillus subtilis by netropsin, Biochem. Biophys. Res. Commun., 67, 414, 10.1016/0006-291X(75)90331-9
Kersten, 1974, Inhibitors of nucleic acid synthesis. Biophysical and biochemical aspects, Vol. 18, 98
Kersten, 1967, Reaktionen verschiedener Antibiotika mit Nucleinsäure und ihre Wirkung auf den Nucleisäurestoffwechsel, 177
Khorlin, 1980, A new type of AT-specific ligand constructed of two netropsin-like molecules, FEBS Lett., 118, 311, 10.1016/0014-5793(80)80246-8
Khorlin, 1982, DNA base pair sequence specific ligands. VI. Synthesis of oligopeptide analogs of distamycin A, Bioorgan. Khim., 8, 1063
Khorlin, 1982, DNA base pair sequence specific ligands. VIII. Synthesis of AT-specific ligands builts of two netropsin-like molecules linked symmetrically by residues of different aliphatic dicarboxylic acids, Bioorgan. Khim., 8, 1358
Kidson, 1970, Interactions of hormonal steroids with nucleic acids. III. Role of polymer structure, Biochemistry, 9, 1571, 10.1021/bi00809a015
Kukuchi, 1984, Reverse gyrase of topoisomerase which introduces positive superhelical turns into DNA, Nature, 309, 677, 10.1038/309677a0
Klevit, 1985, The structure of a drug-DNA complex in solution: two-dimensional 1HNMR studies on the interaction between distamycin A and a symmetrical DNA dodecamer, 149
Kluepfel, 1975, Naphthyridinomycin, a new broad-spectrum antibiotic, J. Antibiot., 28, 497, 10.7164/antibiotics.28.497
Kohn, 1975, Anthramycin, 3
Kolichinsky, 1975, Structure of complexes of distamycin type antibiotics and actinomycin D with DNA: New data on the localization of these antibiotics within the DNA narrow groove, Molec. Biol. (USSR), 9, 19
Kopka, 1983, Ordered water structure around a B-DNA dodecamer, J. Molec. Biol., 163, 129, 10.1016/0022-2836(83)90033-5
Kopka, 1985, The binding of netrospin to double-helical B-DNA of sequence CGCGATTBrCGCG: Single crystal x-ray structure analysis, 413
Kopka, 1985, The molecular origin of DNA-drug specificity in netrospin and distamycin, 82, 1376
Kopka, 1985, The binding of an antitumor drug to DNA: Netropsin and CGCGAATTBrCGCG, J. molec. Biol., 183, 553, 10.1016/0022-2836(85)90171-8
Kotler, 1971, Rifampicin and distamycin A as inhibitor of Rous sarcoma virus reverse transcriptase, Nature New Biol., 234, 212, 10.1038/newbio234212a0
Kotler, 1972, Effects of distamycin A and congocidine on DNa synthesis by Rous Sarcoma Virus reverse transcriptase, FEBS Lett., 22, 222, 10.1016/0014-5793(72)80050-4
Kozymyan, 1978, Studies of bouyant density changes of linear and circular DNA upon binding of sibiromycin by ultracentrifugaration, Antibiotiki, 11, 771
Kozymyan, 1980, DNA base specificty of sibiromycin binding, Antibiotiki, 25, 210
Krey, 1980, Nonintercalative binding to DNA, Prog. molec. subcell. Biol., 7, 43, 10.1007/978-3-642-67701-4_2
Krey, 1970, Studies on the complex of distamycin A with calf thymus DNA, FEBS Lett., 10, 175, 10.1016/0014-5793(70)80446-X
Krey, 1975, Studies on methyl green-DNA complex and its dissociaton by drugs, Biochemistry, 14, 5061, 10.1021/bi00694a005
Krey, 1973, Interaction of the antibiotic distamycin A with native DNA and with synthetic duplex poly-deoxribonucleotides, FEBS Lett., 29, 58, 10.1016/0014-5793(73)80015-8
Krey, 1976, Interactions of the antibiotic distamycin A with homopolymetric single-stranded polydeoxyribonucleotides and with φX174 DNA, Molec. Pharmacol., 12, 185
Krylov, 1979, Induction of fluorescent labeled analogs of antibiotic distamycin A with synthetic polydeoxyribonucleotides, Biofizika, 24, 181
Krylov, 1979, Quantitative estimation of the contribution of pyrrolecarboxamide groups of the antibiotic distamycin A into specificity of its binding to DNA AT pairs, Nucl. Acids Res., 6, 289, 10.1093/nar/6.1.289
Kuroyedov, 1977, Distamycin A and its analogs as agents for endo R. Eco RI activity, Gene, 1, 389, 10.1016/0378-1119(77)90043-9
Lane, 1983, Sequence specificity of actinomycin D and netropsin binding to pBR 322 DNA analyzed by protection from DNasel, 80, 3260
Lang, 1977, Structural factors involved in the recognition of helix distortions in UV-damaged DNA by model peptides, Studia Biophys., 61, 123
Lang, 1979, Structural transitions of chromatin induced by netropsin, Acta biol. med. germ., 38, 33
Latt, 1976, Spectral studies on 33258 Hoechst and related bisbenzimidazole dyes useful for fluorescent detection of DNA synthesis, J. Histochem. Cytochem., 24, 24, 10.1177/24.1.943439
Latt, 1975, Optical studies of the interaction of 33258 Hoechst with DNA, chromatin, and meatphase chromosomes, Chromosoma, 52, 297, 10.1007/BF00364015
Latt, 1975, Recent developments in the detection of DNA synthesis by 33258 Hoechst fluorescence, J. Histochem. Cytochem., 23, 493, 10.1177/23.7.1095650
Lavery, 1981, The molecualr electrostatic potential and steric accessibility of poly(dI·dC). Comparison with poly(dG·dC), Nucl. Acids. Res., 9, 7041, 10.1093/nar/9.24.7041
Lavery, 1981, The molecular electrostatic potential and steric accessibility of A-DNA, Nucl. Acids Res., 9, 4677, 10.1093/nar/9.18.4677
Lavery, 1981, The molecular electrostatic potential and steric accessibility of poly(dA-dT)·poly(dA-dT) in various conformations: B-DNA, D-DNA and ‘alternating-B’ DNA, Nucl. Acids Res., 9, 6539, 10.1093/nar/9.23.6539
Lefresne, 1967, Structural changes of polyriboinosimic acid induced by a steroidal diamine, irehdiamine A, Biochem. Biophys. Res. Commun., 29, 216, 10.1016/0006-291X(67)90590-6
Lerman, 1961, Structural considerations in the interaction of DNA and acridines, J. molec. Biol., 3, 18, 10.1016/S0022-2836(61)80004-1
Li, 1982, CC-1065 (NSC 298223), a novel antitumor agent that interacts strongly with the double stranded DNA, Car Res., 42, 999
Kiu, 1978, Micrococcus luteus DNA gyrase: Active components and a mnodel for its supercoiling of DNA, 75, 2098
Löber, 1975, On the spectral properties of surface complexes of the antibiotic netropsin and of ethidium bromide with an inorganic poly-phosphate and DNA, Studia Biophys., 52, 25
Löber, 1983, Positively supercoiled plasmid DNA is produced by treatment of E.coli with DNA gyrase inhibitors, Nucl. Acids Res., 11, 2999, 10.1093/nar/11.10.2999
Loidl, 1985, Banding of Allium chromosomes protected against DNase digestion by DNA-binding drugs, Stain Technol., 60, 13, 10.3109/10520298509113886
Loucks, 1979, Antibiotic induced electrophoretic mobility shifts of DNA restriction fragments, Nucl. Acids Res., 6, 1869, 10.1093/nar/6.5.1869
Lown, 1983, The mechanisms of action of quinone antibiotics, Molec. cell. Biochem., 55, 17, 10.1007/BF00229240
Lown, 1978, Photoreaction of psoralen and other furocoumarins with nucleic acids, Bioorg. Chem., 7, 85, 10.1016/0045-2068(78)90020-2
Lown, 1982, Molecular mechanisms of binding and single-strand scission of deoxyribonucleic acid by the antitumor antibiotics saframycins A and C, Biochemistry, 21, 419, 10.1021/bi00532a001
Luck, 1973, Interaction of neutropsin with DNA in the course of the B-A transition, Sodium Biophys., 40, 9
Luck, 1976, On the specificity of the interaction of distamycins with DNA and synthetic duplex polydeoxyribonucleotides, Studia Biophys., 58, 241
Luck, 1974, Conformational dependent binding of netropsin and distamycin to DNA and DNA model polymers, Nucl. Acids Res., 1, 503, 10.1093/nar/1.3.503
Luck, 1977, Specific interactions of distamycin A and its analogs with (A·T)rich and (G·C)rich duplex regions of DNA and deoxypolynucleotides, Nucl. Acids Res., 4, 2655, 10.1093/nar/4.8.2655
Luck, 1982, Bindig of distamycin oligopeptides to the dodecamer duplex of d(CACAAGCTTGTG), Studia Biophys, 92, 69
Luck, 1984, Interaction of nucleic acids with a non-intercalative antileukemic compoound containing bisquaternary heterocytes, Biochim. Biophys. Acta, 782, 41, 10.1016/0167-4781(84)90104-0
Luck, 1984, Binding of the nonintercalating antitumor drug NSF-101327 to nucleic acids, Studia Biophys., 271
Macdermott, 1985, Circulation dichroism of supercoiled DNA, Vol. 6, 373
Mahler, 1966, Nucleic acid interactions. VI. Effects of steroidal diamines, Biochemistry, 5, 2177, 10.1021/bi00871a005
Malcolm, 1981, Differential reactivities at restriction enzyme sites, Biochim. biophys. Acta, 655, 128, 10.1016/0005-2787(81)90002-2
Malcolm, 1983, Netropsin increases the linking number of DNA, Cold Spring Harb. Symp. quant. Biol., 47, 323, 10.1101/SQB.1983.047.01.037
Marck, 1982, Specific interaction of netropsin, distamycin-3 and analogs with I·C duplexes: revion towards the 2′-deoxy-2′-deoxy-2t́-deoxy-2′-fluoro-hybrid duplexes upon specific interactions with retropsin, distamycin-3 and analogs, Nucl. Acids Res., 10, 6147, 10.1093/nar/10.19.6147
Marky, 1985, Ligand binding to d(GCGAATTCGO)1, 147
Marky, 1983, Calorimetric and spectroscopic investigation of drug-DNA interactions. I. The binding of netropsin to poly d(AT), Nucl. Acids Res., 11, 2857, 10.1093/nar/11.9.2857
Marky, 1983, Calorimetric and spectroscopic investigation of drug-DNA interactions: II. Dipyrandium binding to poly d(AT), Nucl. Acids Res., 11, 5701, 10.1093/nar/11.16.5701
Marky, 1983, Thermodynamics of drug-DNA interactions, Vol. 1, 487
Marky, 1985
Martin, 1978, Conformational features of distamycin-DNA and netropsin-DNA complexes by Raman spectroscopy, 75, 5483
Martin, 1981, 1065 (NSC-298223), a potent new antitumor agent—improved production and isolation, characterization and antitumor activity, J. Antibiot., 34, 1119, 10.7164/antibiotics.34.1119
Martin, 1983, Use of an 125I-labelled DNA ligand to probe DNA structure, Nature, 302, 452, 10.1038/302452a0
Matsuda, 1982, Some evidence for interaction of d-cycloserine with DNA, J. Antibiot., 35, 893, 10.7164/antibiotics.35.893
Matthews, 1978, The use of netropsin with CsCl gradients for the analysis of DNA and its application to restriction nuclease fragments of ribosomal DNA from Physarum polycephalum, Eur. J. Biochem., 82, 569, 10.1111/j.1432-1033.1978.tb12052.x
Matthews, 1980, Cat satellite DNA. Isolation using netropsin with CsCl gradients, Biochim. biophys. Acta, 606, 228, 10.1016/0005-2787(80)90032-5
Mayr, 1983, Characterization of the canine karyotype by counterstain-enhanced chromosome banding, Can. J. Genet. Cytol., 25, 616, 10.1139/g83-092
Mazini, 1983, Interaction of diamidino-2-phenylindole (DAPI) with natural and synthetic nucleic acids, Nucl. Acids Res., 11, 8861, 10.1093/nar/11.24.8861
Mazza, 1973, Interaction between DNA and distamycin A studied by transformation in Bacillus subtilis, Antimicrob. Ag. Chemother., 3, 384, 10.1128/AAC.3.3.384
McGhee, 1976, Theoretical calculations of the helix-coil transition of DNA in the presence of large, cooperative binding ligands, Biopolymers, 15, 1345, 10.1002/bip.1976.360150710
Melnikova, 1975, Accessibility of the minor groove of DNA in chromatin to the binding of antibiotics metropsin and distamycin A, Molec. Biol. Rep., 2, 135, 10.1007/BF00357544
Mikhailov, 1981, Mechanism of AT base pairs recognition by the dye Hoechst 33258, Molec. Biol. SSSR, 15, 690
Mildner, 1979, Molecular mechanism of action of diaminephenylindole (DAPI). II. Effect of DAPI on the template activity of DNA and polydeoxynucleotides in the DNA-polymerase system from bacteria, eukaryotic cells and RNA tumor viruses, Cell molec. Biol., 25, 399
Mildner, 1978, Interaction of 4′-6-diamidino-2-phenylindole to nucleic acids and its implication to their template activity in RNA polymerase reaction of E.coli bacteria and of Friend-virus infected mouse spleen, Cancer Lett., 4, 89, 10.1016/S0304-3835(78)93687-X
Minchenkova, 1980, Reversion of the B to A transition of DNA induced by specific interaction with the oligopeptide distamycin A, Biopolymers, 19, 823, 10.1002/bip.1980.360190408
Müller, 1977, Chromomycin, olivomycin and bleomycin as inhibitors of DNA and RNA polymerases, A1, 457
Müller, 1975, Interactions of heterochromatic compounds with nucleic acids. A·T-specific non-intercalating DNA ligands, Eur. J. Biochem., 54, 385, 10.1111/j.1432-1033.1975.tb04149.x
Müller, 1974, Distamycin: an inhibitor of DNA-dependent nucleic acid synthesis, Chem.-Biol. Interact., 8, 183, 10.1016/0009-2797(74)90040-4
Müller, 1974, Influence of template inactivators on the binding of DNA polymerase to DNA, Nucl. Acids Res., 1, 63, 10.1093/nar/1.1.63
Müller, 1976, Potentiation of the effectiveness of bleomycin by A·T-specific DNA ligands in vitro as well as in vivo, Cancer Lett., 1, 127, 10.1016/S0304-3835(75)95965-0
Nakamura, 1964, On the structure of netropsin, J. Antibiot. Ser. A., 17, 220
Nath, 1979, Alteration of restriction endonuclease cleavage frequency, 45
Nechipurenko, 1984, Cooperative interactions between analogs of distamycin A bound on DNA, Molec. Biol. SSSR, 18, 332
Nechipurenko, 1984, Cooperative effects on binding of large ligands to DNA. I. Long-range cooperative interactions between bound ligand molecules, Molec. Biol. SSSR, 18, 798
Needham-Van Devanter, 1984, Characterization of an adduct between CC-1065 and a defined oligodeoxynucleotide duplex, Nucl. Acids Res., 12, 6159, 10.1093/nar/12.15.6159
Neidle, 1979, The molecular basis for the action of some DNA-binding drugs, Prog. med. Chem., 16, 151, 10.1016/S0079-6468(08)70188-7
Neidle, 1983, X-ray crystallographic studies of nucleic acids and nucleic acid-drug complexes, Prog. Biophys. molec. Biol., 41, 43, 10.1016/0079-6107(83)90025-1
Neil, 1981, Antitumor activity and acute toxicity of CC-1065 (NSC-298223) in the mouse, 22, 244
Neville, 1966, The interaction of acridine dyes: An X-ray diffraction and optical investigation, J. molec. Biol., 17, 57, 10.1016/S0022-2836(66)80094-3
Newton, 1967, Interaction of berenil with DNA and some characteristics of the berenil-DNA complex, Biochem. J., 105, 50P
Newton, 1975, Berenil: A trypanocide with selective activity against extranuclear DNA, 34
Nilsson, 1982, Structure of restriction endonuclease MboI cleavage sites protected by actinomycin D or distamycin A, FEBS Lett., 145, 360, 10.1016/0014-5793(82)80200-7
Norden, 1977, Binding of methyl green to DNA analyzed by linear dichroism, Chem. Phys. Lett., 50, 508, 10.1016/0009-2614(77)80379-5
Nosikov, 1977, Protection of particular endonuclease R Hind III cleavage sites by distamycin A, propyldistamycin and netropsin, Nucl. Acids Res., 4, 2263, 10.1093/nar/4.7.2263
Nosikov, 1976, Protection of particular cleavage sites of restriction endonucleases by distamycin A and actinomycin D, Nucl. Acids Res., 3, 2293, 10.1093/nar/3.9.2293
Nussinov, 1984, Promotor helical structure variation at the E.coli polymerase interaction sites, J. biol. Chem., 259, 6798, 10.1016/S0021-9258(17)39798-3
Ohlendorf, 1983, Structural studies of protein-nucleic acid interactions, A. Rev. Biophys. Bioeng., 12, 259, 10.1146/annurev.bb.12.060183.001355
Pardi, 1983, Kinetics for exchange of the imino protons of the d(CGCGAATTCGCG) double helix in complexes with the antibiotics netropsin and/or actinomycin, Biochemistry, 22, 1107, 10.1021/bi00274a018
Patel, 1979, Netropsin·dGdGdAdAdTdTdCdC complex. Antibiotic binding at adenine·thymine base pairs in the minor groove of the self-complementary octanucleotide duplex, Eur. J. Biochem., 99, 369, 10.1111/j.1432-1033.1979.tb13265.x
Patel, 1979, Nuclear Magnetic Resonance studies of drug-nucleic acid interactions at the synthetic DNA level in solution, Acc. Chem. Res., 12, 118, 10.1021/ar50136a002
Patel, 1979, Structure and dynamics of poly(dG-dC) in solution steroid diamine-nucleic acid complexes and generation of an “alternating B-DNA” conformation in high salt, 397
Patel, 1981, Mutual interaction between adjacent dG·dC actinomycin binding sites and dA·dT netropsin binding sites on the self-complementary d(CGCGAATTCGCG) duplex in solution, 78, 7281
Patel, 1982, Antibiotic-DNA interactions: Intermolecular nuclear Overhauser effects in the netropsin d(CGCGAATTCGCG) complex in solution, 79, 6424
Patel, 1979, Netropsin-poly(dA-dT) complex in solution: Structure and dynamics of antibiotic-free base pair regions and those centered on bound netropsin, 74, 5207
Patel, 1979, Steroid diamino-nucleic acid interactions: Partial insertion of dipyrandium between unstacked base pairs of the poly(dA-dT) duplex in solution, 76, 24
Patel, 1981, Mutual interaction between adjacent dG·dC actinomycin binding sites and dA·dT netropsin binding sites on the self-complementary d(CGCGAATTCGCG) duplex in solution, 78, 7281
Patel, 1981, Right-handed alternating DNA conformation: Poly(dA-dT) adopts the same dinucleotide repeat with cesium, tetraalkylammonium, and 3α,5β,17β-dipyrrolidinium steroid dimethiodide cations in aqueous solution, 78, 4063
Patel, 1982, DNA conformation, dynamics and interactions in solution, Science, 216, 581, 10.1126/science.6280281
Patel, 1983, Sequence dependence of DNA conformation, dynamics and interactions in solution, Vol. 55, 133
Patel, 1984, Sequence dependence of DNA conformation, dynamics and interactions in solutions, Vol. 55, 133
Peacock, 1973, The organization of highly repeated DNA sequences in Drosophila melanogaster chromosomes, 38, 405
Penco, 1967, Distamicina A. Nota II. Sintesi totale, Gazz. Chim. Italiana, 97, 1110
Pimpinelli, 1976, Characterization of Drosophila heterochromatin. II. C- and N-banding, Chromosoma, 57, 377, 10.1007/BF00332161
Pjura, 1985, Structure of a DNA:DNA-binding fluorochrome complex: CGCGAATTCGCG:Hoechst 33258, 148
Poletayev, 1976, Circular dichroism of DNA-proflavine, DNA-ethidium and DNA-distamycin flow-oriented complexes, Molec. Biol. Rep., 3, 131, 10.1007/BF00423226
Polyanovsky, 1978, Regulation of restriction endonuclease activity with antibiotics, Adv. Enzyme Reg., 17, 307, 10.1016/0065-2571(79)90019-0
Prantera, 1979, Effects of distamycin A on human leukocytes in vitro, Cytogenet. Cell Genet., 23, 103, 10.1159/000131310
Prasad, 1976, Nature of interaction of antitumor antibiotic mithramycin with DNA, FEBS Lett., 71, 171, 10.1016/0014-5793(76)80923-4
Pullman, 1984, Electrostatics and specificity in nucleic acid reactions, Vol. 55, 1
Pullman, 1981, Structural factors involved in the binding of netropsin and distamycin A to nucleic acids, Studia Biophys., 86, 95
Pullman, 1985, Factors governing the recognitory interaction of nonintercalating ligands with DNA, Comments Molec. cell Biophys.
Pullman, 1983, Theoretical studies of the polymorphism and microheterogeneity of DNA, 23
Puschendorf, 1969, Effect of distamycin A on the template activity of DNA in a DNA polymerase system, FEBS Lett., 4, 355, 10.1016/0014-5793(69)80275-9
Puschendorf, 1974, Effect of distamycin A on T4-DNA-directed RNA synthesis, Eur. J. Biochem., 49, 531, 10.1111/j.1432-1033.1974.tb03857.x
Rajagopalan, 1985, Interaction of non-intercalative drugs with DNA: Distamycin analogues, J. Biosci., 7, 27, 10.1007/BF02716763
Rajalakshmi, 1978, Studies on carcinogen chromatin-DNA interaction: Inhibition of N-methyl-N-nitrosourea-induced methylation of chromatin-DNA by spermine and distamycin A, Biochemistry, 17, 4515, 10.1021/bi00614a024
Rajalakshmi, 1980, Carcinogen-DNA interaction: Differential effects of distamycin A and spermine on the formation of 7-methylguanine in DNA by N-methyl-N-nitrosourea, methylmethanesulfonate, and dimethylsulfate, Teratogen. Carcinogen. Mutagenesis, 1, 97, 10.1002/tcm.1770010110
Rauen, 1965, Coplanare Hetero-oligobasen (Phthalanilide), hochaktive Cytostatika, Experientia, 21, 300, 10.1007/BF02297043
Reinert, 1972, Adenosine·thymine cluster-specific elongation adn stiffening of DNA induced by the oligopeptide antibiotic netropsin, J. molec. Biol., 72, 593, 10.1016/0022-2836(72)90178-7
Reinert, 1973, DNA secondary structure modulation; interaction of the A·T cluster-specific oligopeptide antibiotic netropsin with very A·T-rich DNA, Studia Biophys., 40, 99
Reinert, 1973, Hydrodynamic properties and conformational changes of linear native DNA, 320
Reinert, 1978, Interaction of the oligopeptides distamycin and actinomycin D with DNA; viscometric criteria for binding and bending, Studia Biophys., 67, 49
Reinert, 1981, Aspects of specific DNA-protein interaction; local bending of DNA molecules by in-register binding of the oligopeptide antibiotic distamycin, Biophys. Chem., 13, 1, 10.1016/0301-4622(81)80019-1
Reinert, 1970, Conformational changes of DNA by interactions with oligopeptide antibiotics as studied by viscometric investigations, Studia Biophys., 24/25, 319
Reinert, 1979, Aspects of specific protein-DNA interaction; multi-mode binding of the oligopeptide antibiotic netropsin to (A·T) rich DNA segments, Nucl. Acids Res., 7, 1375, 10.1093/nar/7.5.1375
Reinert, 1980, Counterion dependent variation of DNA secondary structure in (A·T) clusters; evidence by use of netropsin as a structural probe, Nucl. Acids Res., 8, 5519, 10.1093/nar/8.22.5519
Reinert, 1981, Temperature mediated variation of DNA secondary structure in (A·T) clusters; evidence by use of the oligopeptide antibiotic netropsin as a structural probe, Nucl. Acids. Res., 9, 2335, 10.1093/nar/9.10.2335
Remers, 1979, Aureolic acid group, Vol. 1, 133
Retchinsky, 1981, Bis-netropsin as a selective inhibitor of DNA dependent RNA synthesis, Dokl. Akad. Nauk SSSR, 259, 244
Robertson, 1982, A comparison of the requirements for antitumour activity and antibacteriophage lambda activity for a series of nonintercalactive DNA-binding agents, Eur. J. Cancer clin. Oncol., 18, 271, 10.1016/0277-5379(82)90046-3
Rocchi, 1976, Effect of Hoechst 33258 on chinese hamster chromosomes, Chromosoma, 56, 41, 10.1007/BF00293728
Ronne, 1985, Simultaneous R-banding and localization of AT-clusters in human chromosomes, Hereditas, 98, 241, 10.1111/j.1601-5223.1983.tb00601.x
Ronne, 1983, Chromosome banding by in vitro exposure to dA-dT probes and BUdR. Relationships between DNA base clusters, replication pattern, and banding, Hereditas, 99, 245, 10.1111/j.1601-5223.1983.tb00896.x
Rubin, 1984, An unexpected major groove bidning of netropsin and distamycin A to tRNAphe, J. Biomolec. Struct. Dyn., 2, 165, 10.1080/07391102.1984.10507555
Sahar, 1980, Energy transfer and binding competition between dyes used to enhance staining differentiation in metaphase chromosomes, Chromosoma, 79, 1, 10.1007/BF00328469
Salyanov, 1979, Compactization of two-chain DNA as means in determination of its antibiotic binding constant, Antibiotiki (USSR), 2, 114
Sande, 1977, Reverse banding on chromosomes produced by a guanosine-cytosine specific DNA binding antibiotic: olivomycin, Science, 195, 400, 10.1126/science.63994
Sarma, 1985, Netropsin specifically recognizes one of the two conformationally equivalent strands of poly(dA)·poly(dT). One dimensional NMR study at 500 MHz involving NOE transfer between netrospin and DNA protons, 2, 1085
Sartorelli, 1965, Complex formation with DNA and inhibition of nucleic acid synthesis by methylglyoxdal bis(guanylhydrazone), Biochim. biophys. Acta, 103, 174, 10.1016/0005-2787(65)90550-2
Scott, 1967, On the mechanism of the methyl green-pyronine stain for nucleic acids, Histochemie, 9, 30, 10.1007/BF00281805
Schlammadinger, 1977, Inhibition of the Q-bands on human chromosomes by netropsin, Hum. Genet., 69, 309, 10.1007/BF00295425
Schmidt, 1979, Studies on the substrate specificity of the DNA methylase activity from Escherichia coli K-12, Z. Allg. Mikrobiol., 19, 489
Schnedl, 1978, Structure and variability of human chromosomes analyzed by recent techniques, Hum. Genet., 41, 1, 10.1007/BF00278866
Schnedl, 1980, Die Bänderung der Chromosomen, Verh. Anat. Ges., 74, 25
Schnedl, 1977, Mithramycin and DIPI: A pair of flurochromes specific for GC- and AT-rich DNA respectively, Hum. Genet., 36, 299, 10.1007/BF00446280
Schnedl, 1980, Effects of counterstaining with DNA binding drugs on fluorescent banding patternsm of human and mammalian chromosomes, Eur. J. cell. Biol., 20, 290
Schnedl, 1981, Differential fluorescent staining of porcine heterochromatin by chromomycin A3, distamycin A, DAPI and D287/170, Cytogenet. Cell Genet., 31, 249, 10.1159/000131664
Schuhmann, 1974, Wirkung von Distamycin A und Netropsin auf normale und zellwandlose Zellen von E. coli W 1655 F+, Z. allg. Mikrobiol., 14, 321, 10.1002/jobm.3630140407
Schultz, 1983, Sequence specific double strand cleavage of DNA by penta-N-methyl-pyrrolecarboxamide-EDTA · Fe(II), 80, 6834
Schultz, 1983, Sequence-specific double-strand cleavage of DNa by bis(EDTA-distamycin · FeII) and EdTA-bis(distamycin) · FeII, J. Am. Chem. Soc., 105, 7748, 10.1021/ja00364a049
Schultz, 1984, Distamycin and penta-N-methylpyrrolecarboxamide binding sites on native DNA. A comparison of methidiumpropyl-EDTA · Fe(II) footprinting and DNA affinity cleaving, J. Biomolec. Struct. Dyn., 1, 1133, 10.1080/07391102.1984.10507508
Schultz, 1982, Design and synthesis of a sequence-specific DNA cleaving molecule, J. Am. Chem. Soc., 104, 6861, 10.1021/ja00388a101
Schweizer, 1976, Reverse fluorescent chromosome banding with chromomycin and DAPI, Chromosome, 58, 307, 10.1007/BF00292840
Schweizer, 1980, Simultaneous fluorescent staining of R bands and specific heterochromatic regions (DA-DAPI bands) in human chromosomes, Cytogenet. Cell Genet., 27, 190, 10.1159/000131482
Schweizer, 1981, Review article: counterstain-enhanced chremosome banding, Hum. Genet., 57, 1
Schweizer, 1983, Distamycin-DAPI bands: properties and occurrence in species, 43
Schweizer, 1976, Heterochromatin diversity in Cymbidium and its relationship to differential replication, Exp. Cell Res., 98, 411, 10.1016/0014-4827(76)90450-X
Schweizer, 1978, Modification of DAPI banding on human chromosomes by prestaining with a DNA-binding oligopeptide antibiotic, distamycin A, Exp. Cell Res., 111, 327, 10.1016/0014-4827(78)90177-5
Seeman, 1976, Sequence-specific recognition of double helical nucleic acids by proteins, 73, 804
Shishido, 1984, Enhancement of S1-nuclease suseptibility of negatively superhelical DNA by netropsin, Biochem. biophys. Res. Commun., 124, 388, 10.1016/0006-291X(84)91565-1
Siccardi, 1975, Genetic and physiological studies on the site of action of distamycin A, Antimicrob. Ag. Chemother., 8, 370, 10.1128/AAC.8.3.370
Silver, 1975, Irehdiamine and malouetine, 614
Sivak, 1965, Studies on the formation of phthalanilide-DNA complexes and their relationship to chemotherapeutic activity, Cancer Res., 25, 902
Skamrov, 1985, Specific protection of DNA form DNAase I action by distamycin A, netropsin and bis-netropsins, Molec. Biol. USSR, 19, 177
Slavik, 1975, Chromomycin A3, mithramycin and olivomycin: Antitumor antibiotics of related structure, Adv. Pharmac. Chemother., 12, 1, 10.1016/S1054-3589(08)60218-5
Sluyser, 1983, Interaction of steroid hormone receptors with DNA, Trends Biochem. Sci., 8, 236, 10.1016/0968-0004(83)90347-X
Smith, 1966, Reversible inhibition of DNA virus replication with mithramycin, 121, 209
Smirnov, 1978, Kinetics of DNA-distamycin A AT-specific complex formation, Biofizika, 23, 384
Snounou, 1983, Production of positively supercoiled DNA by netropsin, J. molec. Biol., 167, 211, 10.1016/S0022-2836(83)80043-6
Snounou, 1984, Supercoiling and the mechanism of restriction endonucleases, Eur. J. Biochem., 138, 275, 10.1111/j.1432-1033.1984.tb07912.x
Sobell, 1977, Visualization of drug-nucleic acid interactions at atomic resolution. III. Unifying structural concepts in understanding drug-DNA interactions and their broader implication in understanding protein-DNA interactions, J. molec. Biol., 114, 333, 10.1016/0022-2836(77)90254-6
Strassburger, 1974, Light scattering of DNA-netropsin complexes, Studia Biophys., 45, 121
Strassburger, 1975, Untersuchungen zur kompetitiven Wechselwirkung, Studia Biophys., 51, 201
Streltsov, 1980, Specific interaction between oligovaline and double-stranded nucleic acids, Biofizika, 11, 929
Sturm, 1975, Interaction between hydroxystilbamidine and DNA. II. Temperature jump relaxation study. Dynamics of nucleic acids and polynucleotides, Biochim. biophys. Acta, 407, 43, 10.1016/0005-2787(75)90022-2
Sugiura, 1982, Nucleotide sequence specificity of DNA cleavage by ironbleomycin, J. biol. Chem., 257, 10544, 10.1016/S0021-9258(18)33852-3
Sumner, 1981, Anthramycin inhibition of restriction endonuclease cleavage and its use as a reversible blocking agent in DNA constructions, Nucl. Acids Res., 9, 2105, 10.1093/nar/9.9.2105
Sutherland, 1978, Magnetic circular dichroism of netropsin and natural circular dichroism of the netropsin-DNA complex, Biochemistry, 17, 5088, 10.1021/bi00617a003
Sutherland, 1979, Netropsin: Interaction with ultraviolet irradiated DNA, Photochem. Photobiol., 29, 943, 10.1111/j.1751-1097.1979.tb07796.x
Sutherland, 1983, Heritable fragile sites on human chromosomes. XI. Factors affecting expression of fragile sites at 10q25, 16q22 and 17q12, Am. J. Hum. Genet., 36, 110
Sveshnikov, 1978, Oriented complexes of nucleic acids with small ligands. I. Anisotropy of absorbance of the DNA complex with distamycin and its analogs, Molec. Biol. (USSR), 12, 557
Swenson, 1982, Mechanism of interaction of CC-1065 (NSC298223) with DNA, Cancer Res., 42, 2821
Takeshita, 1983, Sequence specific binding of drugs to DNA, 114
Tatti, 1978, Enhancement of buoyant separations between DNAs in preparative CsCl gradients containing distamycin distamycin A or netropsin, Analyt. Biochem., 89, 561, 10.1016/0003-2697(78)90385-8
Tatti, 1978, Enhancement of buoyant separations between DNAs in preparative CsCl gradients containing distamycin distamycin A or netropsin, Analyt. Biochem., 89, 571, 10.1016/0003-2697(78)90385-8
Taylor, 1984, DNA affinity cleaving. Sequence specific cleavage of DNA by distamycin-EDTA. Fe(II), Tetrahedron, 40, 457, 10.1016/0040-4020(84)85050-4
Thomas, 1975, Studies on the cleavage of bacteriophage lambda DNA with EcoRI restriction endonuclease, J. molec. Biol., 91, 315, 10.1016/0022-2836(75)90383-6
Thrum, 1959, Eine neue, von einer Spezies der Streptomyces-reticuli-Gruppe gebildete Antibiotikakombination, Naturwissenschaften, 46, 87, 10.1007/BF00599128
Thust, 1980, Localization of AT-clusters in normal mouse chromosomes by netropsin prefixation treatment in vitro, Hereditas, 93, 321, 10.1111/j.1601-5223.1980.tb01370.x
Thust, 1981, Structural modification induced in Chinese hamster V79-E chromosomes by prefixation treatment in vitro with AT-specific agents netropsin, distamycin A, and Hoechst 33258, Hereditas, 94, 209, 10.1111/j.1601-5223.1981.tb01754.x
Topal, 1984, Molecular mechanism of chemical mutagenesis: 9-aminoacridine inhibits DNA replication in vitro by destabilizing the DNA growing point and interacting with the DNA polymerase, Biochemistry, 23, 2367, 10.1021/bi00306a007
Ts'o, 1964, Interaction of nucleic acids. I. Physical binding of thymine, adenine, steroids, and aromatic hydrocarbons to nucleic acids, 51, 17
Turchin, 1977, DNA base pair specific ligands. II. Studies of distamycin A chromophore stereochemistry by 1H-NMR spectroscopy, Bioorgan. Khim., 4, 1065
Van de Sande, 1982, Z-DNA, the left-handed helical form of polt(dG-dC) · poly(dG-dC) in MgCl2-ethanol, is biologically active, EMBO J., 1, 115, 10.1002/j.1460-2075.1982.tb01133.x
Van de Sande, 1977, Differential fluorescent labelling of chromosomes and DNA with base pair specific DNA binding antibiotics. Human cytogen, VII, 127
Van Dyke, 1983, Chromomycin, mithramycin, and olivomycin binding sites on heterogeneous DNA. Footprinting with (methidiumpropyl-EDTA) iron (II), Biochemistry, 22, 2373, 10.1021/bi00279a011
Van Dyke, 1983, Methidiumpropyl-EDTA · Fe(II) and DNase I footprinting report different and molecule binding site sizes on DNA, Nucl. Acids Res., 11, 5555, 10.1093/nar/11.16.5555
Van Dyke, 1983, Footprinting with MPE · Fe(II). Complementary-strand analyses of distamycin- and actinomycin-binding siteson heterogeneous DNA, 47, 347
Van Dyke, 1982, Map of distamycin, netropsin, and actinomycin binding sites on heterogeneous DNA: DNA cleavage—inhibition patterns with methidiumpropyl-EDTA · Fe(II), 79, 5470
Von Hippel, 1979, On the molecular bases of the specificity of interaction of trancriptional proteins with genome DNA, 279
Von Hippel, 1984, Protein-nucleic Acid interactions in transcription: A molecular analysis, A. Rev. Biochem., 53, 389, 10.1146/annurev.bi.53.070184.002133
Votavova, 1975, Identification and separation of components of cald thymus DNA using a CsCl-netropsin density gradient, Nucl. Acids Res., 2, 431, 10.1093/nar/2.3.431
Votavova, 1981, Binding of netropsin to DNA in complexes with polypeptides containing repetitive lysine sequences, Biochim. biophys. Acta, 654, 175, 10.1016/0005-2787(81)90169-6
Wähnert, 1984, Interaction between the non-intercalating antitumor drug NSC-101327 and nucleic acids, 64
Wähnert, 1975, (dA · dT)-dependent inactivation of the DNA template properties by interaction with netropsin and distamycin A, Nucl. Acids Res., 2, 391, 10.1093/nar/2.3.391
Wang, 1979, Molecular structure of a left-handed double helical DNA fragment at atomic resolution, Nature, 282, 680, 10.1038/282680a0
Ward, 1965, Base specificity in the interaction of polynucleotides with antibiotic drugs, Science, 149, 1259, 10.1126/science.149.3689.1259
Waring, 1970, Variation of the supercoils in closed circular DNA by binding of antibiotics and drugs: Evidence for molecular models involving intercalation, J. molec. Biol., 54, 247, 10.1016/0022-2836(70)90429-8
Waring, 1981, DNA modification and cancer, A. Rev. Biochem., 50, 159, 10.1146/annurev.bi.50.070181.001111
Waring, 1981, Inhibitors of nucleic acid synthesis, 258
Waring, 1972, Uncoiling of bacteriophage PM2 DNA by binding of steroidal diamines, Biochim. biophys. Acta, 262, 18, 10.1016/0005-2787(72)90214-6
Waring, 1975, Stereochemical aspects of the interaction between steroidal diamines and DNA, Nucl. Acids Res., 2, 567, 10.1093/nar/2.4.567
Wartell, 1974, Netropsin: A specific probe for A-T regions of duplex deoxyribonucleic acid, J. biol. Chem., 249, 6719, 10.1016/S0021-9258(19)42119-4
Wartell, 1975, The compatibility of netropsin and actinomycin binding to natural deoxyribonucleic acid, J. biol. Chem., 250, 2698, 10.1016/S0021-9258(19)41658-X
Watanabe, 1956, Sinanomycin (Netropsin) produced by Streptomyces, J. Antibodies Ser. A, 9, 102
Weiner, 1982, Electrostatic potential molecular surfaces, 79, 3754
Weisblum, 1974, Fluorimetric properties of the bisbenzimidazole derivative Hoechst 33258, a fluorescent probe specific for AT concentration in chromosomal DNA, Chromosoma, 46, 255, 10.1007/BF00284881
Weiss, 1980, Studies on synthesis and CD properties of complementary and self-complementary deoxyoligonucleotides, 7, 73
Wells, 1980, DNA structure and gene regulation, Prog. Nucleic Acid Res., 24, 167, 10.1016/S0079-6603(08)60674-1
White, 1969, Hedamycin and rubiflavin complexes with deoxyribonucleic acid and other polynucleotides, Biochemistry, 8, 1030, 10.1021/bi00831a034
Wilkins, 1982, Selective binding of actinomycin D and distamycin A to DNA, Nucl. Acids Res., 10, 7273, 10.1093/nar/10.22.7273
Wilmanska, 1984, Effect of intercalating and groove-binding ligands on formation of covalent complexes between nitracrine (ledakrin, C-283) or 8-methoxypsoralen and DNA, Biochim. Biophys. Acta, 782, 285, 10.1016/0167-4781(84)90064-2
Wobus, 1977, Effects of the antibiotic netropsin on mouse ascites tumour chromosomes in vitro, Experientia, 33, 1212, 10.1007/BF01922335
Yesair, 1975, The phthalanilides, Vol. 28, 820
Young, 1976, Indirect selection for auxotrophic mutants of Saccharomyces cerevisiae using the antibiotic netropsin, Mutat. Res., 35, 423, 10.1016/0027-5107(76)90204-9
Youngquist, 1985, Sequence-specific recognition of B-DNA by oligo (N-methylpyrrolecarboxamide)s, 82, 2565
Zakrzewska, 1983, A theoretical evaluation of the effect of netropsin binding on the reactivity of DNA towards alkylating agents, Nucl. Acids Res., 11, 8841, 10.1093/nar/11.24.8841
Zakrzewska, 1985, Theoretical exploration of netropsin binding to tRNAPhe, J. biomolec Struct. Dyn., 2, 737, 10.1080/07391102.1985.10506320
Zakrzewska, 1983, Theoretical studies of the selective binding to DNA of two non-intercalating ligands: netropsin and SN18071, Nucl. Acids Res., 11, 8825, 10.1093/nar/11.24.8825
Zakrzewska, 1984, The solvation contribution to the binding energy of DNA with nonintercalating antibiotics, Nucl. Acids Res., 12, 6559, 10.1093/nar/12.16.6559
Zarlenga, 1984, A polycationic amine that induced unique conformational changes in poly(dA-dT) in low salt, Nucl. Acids Res., 12, 6325, 10.1093/nar/12.15.6325
Zasedatelev, 1974, Binding of netropsin to DNA and synthetic polynucleotides, Molec. Biol. Rep., 1, 337, 10.1007/BF00309567
Zasedatelev, 1976, Stereochemical model of the molecular mechanism of recognition of AT pairs through interaction with DNA of the antibiotics distamycin A and netropsin, Dokl. Acad. Nauk SSSR, 231, 1006
Zasedatelev, 1978, A stereochemical model for molecular mechanism of AT pair recognition exhibited by binding of distamycin A and netropsin to DNA, Studia Biophys., 67, 47
Zasedatelev, 1980, Mechanism of recognition of A · T pairs in DNA by Hoechst 33258, Dokl. Akad. Nauk, SSSR, 255, 756
Zasedatelev, 1982, Ligand-DNA recognition: Molecular mechanism of AT-specific binding of dye “Hoechst 33258” to DNA, Studia Biophys., 87, 197
Zelenin, 1976, Use of actinomycin D for the specific quenching of fluorescence of DNA in cells stained with acridine aminoderivatives, J. Histochem. Cytochem., 24, 1169, 10.1177/24.11.63505
Zimmer, 1972, Selective binding of netropsib and distamycin A to DNA and some consequences for the DNA template activity, Studia Biophys., 31/32, 447
Zimmer, 1975, Effects of the antibiotics netropsin and distamycin A on the structure and function of nucleic acids, Prog. Nucleic Acid Res. molec. Biol., 15, 285, 10.1016/S0079-6603(08)60122-1
Zimmer, 1983, Molecular aspects of the specific interaction of nonintercalating oligopeptide antibiotics with DNA, Comments molec. cell Biophys., 1, 399
Zimmer, 1970, Optical rotatory dispersion properties of nucleic acid complexes with the oligopeptide antibiotics distamycin A and Netropsin, FEBS Lett., 10, 338, 10.1016/0014-5793(70)80467-7
Zimmer, 1972, Stability and dissociation of the DNA complexes with distamycin A and netropsin in the presence of organic solvents, urea and high salt concentration, Biochim. biophys. Acta, 287, 376, 10.1016/0005-2787(72)90281-X
Zimmer, 1984, Elements of specific recognition of non-intercalating ligands in the interaction with DNa, Vol. 55, 175
Zimmer, 1967, Interaction of streptothricin and related antibiotics with nucleic acids, Biochim. biophys. Acta, 145, 742, 10.1016/0005-2787(67)90133-5
Zimmer, 1970, Einfluβ von Netropsin und Distamycin A auf die zellfreie Proteinsynthese und die Struktur der Nucleinsäuren, 61
Zimmer, 1970, Changes in the DNA secondary structure by interaction with oligopeptide antibiotics: Thermal melting, ORD and CD of DNA complexes with netropsin and distamycin A derivatives, Studia Biophys., 24/25, 311
Zimmer, 1971, Influence of netropsin and distamycin A on the secondary structure and templete activity of DNA, Eur. J. Biochem., 21, 269, 10.1111/j.1432-1033.1971.tb01466.x
Zimmer, 1971, Interaction of the oligopeptide antibodies netropsib and distamycin A with nucleic acids, J. molec. Biol., 58, 329, 10.1016/0022-2836(71)90250-6
Zimmer, 1972, Binding of analogues of the antibiotics distamycin A and netropsin to native DNA. Effect of chromophore systems and basic residues of the oligopeptides on thermal stability, conformation and template activity of the DNA complexes, Eur. J. Biochem., 26, 81, 10.1111/j.1432-1033.1972.tb01742.x
Zimmer, 1976, Duplex structure formation between oligo(dA)'s and oligo(dT)'s generated by thymine-specific interaction with netropsin, Nucl. Acids Res., 3, 1521, 10.1093/nar/3.6.1521
Zimmer, 1976, Approach to the analysis of decondensed DNA structural regions in chromatin using netropsin as a probe, Biolog. Zentralbl., 95, 157
Zimmer, 1979, Influence of nucleotide sequence on dA · dT-specific binding of netropsin to double-stranded DNA, Nucl. Acid Res., 6, 2831, 10.1093/nar/6.8.2831
Zimmer, 1979, Interaction of netropsin with ultraviolet-light irradiated DNA and poly(dA) · poly(dT), Studia Biophysica, 3, 153
Zimmer, 1979, Recognition of the DNA double-helix by model ligopeptides and implications for protein interactions, 83
Zimmer, 1980, Magnetic circular dichroism study of analogues of the DNa binding ligands netropsin and distamycin A, Spectrosc. Lett., 13, 543, 10.1080/00387018008064052
Zimmer, 1980, Magnetic circular dichroism study of the binding of netropsin and distamycin A with DNA, Biochim. biophys. Acta, 607, 232, 10.1016/0005-2787(80)90076-3
Zimmer, 1980, Protection of (dA · dT) cluster regions in the DNAase I cleavage of DNA by specific interaction with netropsin, Nucl. Acids Res., 8, 2999, 10.1093/nar/8.13.2999
Zimmer, 1982, Differential stabilization of netropsin of inducible B-like conformations in deoxyribo-, ribo- and 2′-deoxy-2−flouroriboadenosine containing duplexes if (dA)n · (dT)n and (dA)n · (dU)n, Nucl. Acids Res., 10, 1721, 10.1093/nar/10.5.1721
Zimmer, 1983, Chain length-dependent association of distamycin-type oligopeptides with A · T and G · D pairs in polynucleotide duplexes, Biochim. biophys. Acta, 15, 22
Zimmer, 1983, Z-DNA and other non-B-DNA structures are reversed to B-DNA by interaction with netropsin, FEBS Lett., 154, 156, 10.1016/0014-5793(83)80894-1
Zimmer, 1984, Divergent affinity of netropsin-type nonintercalators and bisquaternary ammonium heterocyclic drugs towards DNa, Studia Biophys., 247–251
Zimmer, 1985