Non-coding RNAs in cancer diagnosis and therapy

Non-coding RNA Research - Tập 1 - Trang 69-76 - 2016
Mahmood Rasool1, Arif Malik2, Sara Zahid2, Muhammad Abdul Basit Ashraf2, Mahmood Husain Qazi3, Muhammad Asif4, Ahmad Zaheer5, Muhammad Arshad5, Amir Raza5, Mohammad Sarwar Jamal6
1Center of Excellence in Genomic Medicine Research (CEGMR), King AbdulAziz University, Jeddah, Saudi Arabia
2Institute of Molecular Biology and Biotechnology (IMBB), The University of Lahore, Lahore, Pakistan
3Center for Research in Molecular Medicine (CRiMM), The University of Lahore, Lahore, Pakistan
4Department of Biotechnology, BUITEMS, Pakistan
5National Institute for Biotechnology & Genetic Engineering (NIBGE), Faisalabad, Pakistan
6King Fahd Medical Research Center (KFMRC), King Abdulaziz University, Jeddah, Saudi Arabia

Tài liệu tham khảo

Mendell, 2012, MicroRNAs in stress signaling and human disease, Cell, 148, 1172, 10.1016/j.cell.2012.02.005 Esteller, 2011, Non-coding RNAs in human disease, Nat. Rev. Genet., 12, 861, 10.1038/nrg3074 Spizzo, 2012, Long non-coding RNAs and cancer: a new frontier of translational research?, Oncogene, 31, 4577, 10.1038/onc.2011.621 Pennisi, 2012, Genomics. ENCODE project writes eulogy for junk DNA, Science, 337, 1159, 10.1126/science.337.6099.1159 Dunham, 2012, An integrated encyclopedia of DNA elements in the human genome, Nature, 489, 57, 10.1038/nature11247 Djebali, 2012, Landscape of transcription in human cells, Nature, 489, 101, 10.1038/nature11233 Fabian, 2010, Regulation of mRNA translation and stability by microRNAs, Annu. Rev. Biochem., 79, 351, 10.1146/annurev-biochem-060308-103103 Garzon, 2011, Targeting microRNAs in cancer: rationale, within cell-cycle promoters, Nat. Genet., 43, 621 Thorsen, 2012, The therapeutic potential of microRNAs in cancer, Cancer J., 18, 275, 10.1097/PPO.0b013e318258b5d6 Van Rooij, 2012, MicroRNA therapeutics for cardiovascular disease: opportunities and obstacles, Nat. Rev. Drug Discov., 11, 860, 10.1038/nrd3864 Wahlestedt, 2012, Targeting long non-coding RNA to therapeutically upregulate gene strategies and challenges, Nat. Rev. Drug Discov., 9, 775 Fabbri, 2012, MicroRNAs bind to Toll-like receptors to induce prometastatic inflammatory response, Proc. Natl. Acad. Sci. U. S. A., 109, E2110, 10.1073/pnas.1209414109 Vickers, 2011, MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins, Nat. Cell Biol., 13, 423, 10.1038/ncb2210 Kasinski, 2011, Epigenetics and genetics. MicroRNAs en route to the clinic: progress in validating and targeting microRNAs for cancer therapy, Nat. Rev. Cancer, 11, 849, 10.1038/nrc3166 Pencheva, 2013, Control of metastatic progression by microRNA regulatory networks, Nat. Cell Biol., 15, 546, 10.1038/ncb2769 Png, 2012, microRNA regular that mediates endothelial recruitment and metastasis by cancer cells, Nature, 481, 190, 10.1038/nature10661 Song, 2013, MicroRNA-antagonism regulates breast cancer stemness and metastasis via TET-family-dependent chromatin remodeling, Cell, 154, 311, 10.1016/j.cell.2013.06.026 Uhlmann, 2012, Global microRNA level regulation of EGFR-driven cell-cycle protein network in breast cancer, Mol. Syst. Biol., 8, 570, 10.1038/msb.2011.100 Almeida, 2012, Strand-specific miR-28-5p and miR-28-3p have distinct effects in colorectal cancer cells, Gastroenterology, 142, 10.1053/j.gastro.2011.12.047 Melo, 2011, Small molecule enoxacin is a cancer-specific growth inhibitor that acts by enhancing TAR RNA-binding protein 2-mediated microRNA processing, Proc. Natl. Acad. Sci. U. S. A., 108, 4394, 10.1073/pnas.1014720108 Bader, 2011, Developing therapeutic microRNAs for cancer, Gene Ther., 18, 1121, 10.1038/gt.2011.79 Tivnan, 2012, Inhibition of neuroblastoma tumor growth by targeted delivery of microRNA-34a using anti-disialoganglioside GD2 coated nanoparticle, PLoS ONE, 7, e38129, 10.1371/journal.pone.0038129 Trang, 2011, Systemic delivery of tumor suppressor microRNA mimics using a neutral lipid emulsion inhibits lung tumors in mice, Mol. Ther., 19, 1116, 10.1038/mt.2011.48 Chen, 2011, Tumor-specific expression of microRNA-26a suppresses human hepatocellular carcinoma growth via cyclin-dependent and -independent pathways, Mol. Ther., 19, 1521, 10.1038/mt.2011.64 Bader, 2012, miR-34-a microRNA replacement therapy is headed to the clinic Front, Genet, 3, 120 Janssen, 2013, Treatment of HCV infection by targeting microRNA, N. Engl. J. Med., 368, 1685, 10.1056/NEJMoa1209026 Zhang, 2012, LNA-mediated anti-miR-155 silencing in low-grade B-cell lymphomas, Blood, 120, 1678, 10.1182/blood-2012-02-410647 Kluiver, 2012, Rapid generation of microRNA sponges for microRNA inhibition, PLoS ONE, 7, e29275, 10.1371/journal.pone.0029275 Dvinge, 2013, The shaping and functional consequences of the microRNA landscape in breast cancer, Nature, 497, 378, 10.1038/nature12108 Lehmann, 2012, An unconventional role for miRNA: let-7 activates Toll-like receptor 7 and causes neurodegeneration, Nat. Neurosci., 15, 827, 10.1038/nn.3113 Jiang, 2013, Biotech comes to its ‘antisenses’ after hard-won drug approval, Nat. Med., 19, 252, 10.1038/nm0313-252 Ding, 2013, Combined transfection of Bcl-2 siRNA and miR-15a oligonucleotides enhanced methotrexate-induced apoptosis in Raji cells, Can. Bio Med., 10, 16 Hu, 2013, The effect of Bcl-2 siRNA combined with miR-15a oligonucleotides on the growth of Raji cells, Med. Oncol., 30, 430, 10.1007/s12032-012-0430-6 Bockhorn, 2013, MicroRNA-30c inhibits human breast tumour chemotherapy resistance by regulating TWF1 and IL-11, Nat. Commun., 4, 1393, 10.1038/ncomms2393 Memczal, 2013, Circular RNAs are a large class of animal RNAs with regulatory potency, Nature, 495, 333, 10.1038/nature11928 Ling, 2013 Salmena, 2013, A ceRNA hypothesis: the miR-15a oligonucleotides enhanced methotrexate-induced apoptosis in Raji cells, Cancer, 154, 311 Poliseno, 2010, A coding-independent function of gene and pseudogene mRNAs regulates tumour biology, Nature, 465, 1033, 10.1038/nature09144 Hung, 2013, Extensive and coordinated transcription of noncoding RNAs expression, Nat. Rev. Drug Discov., 12, 433 Wheeler, 2012, Targeting nuclear RNA for in vivo correction of myotonic dystrophy, Nature, 488, 111, 10.1038/nature11362 Gutschner, 2013, The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells, Cancer Res., 73, 1180, 10.1158/0008-5472.CAN-12-2850 Kino, 2010, Noncoding RNA Gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor, Sci. Signal, 3, 8, 10.1126/scisignal.2000568 Rusk, 2012, AntagoNATs boost gene expression, Nat. Methods, 9, 437, 10.1038/nmeth.2007 Modarresi, 2012, Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation, Nat. Biotech., 30, 453, 10.1038/nbt.2158 Flemming, 2012, Regulatory watch: pioneering gene therapy on brink of approval, Nat. Rev. Drug Discov., 11, 664, 10.1038/nrd3835 Gruber, 2012, Europe gives gene therapy the green light, Lancet, 380, e10, 10.1016/S0140-6736(12)61992-8 Hansen, 2013, Natural RNA circles function as efficient microRNA sponges, Nature, 495, 384, 10.1038/nature11993 Guttman, 2009, Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals, Nature, 458, 223, 10.1038/nature07672 Lai, 2013, Activating RNAs associate with Mediator to enhance chromatin architecture and transcription, Nature, 494, 497, 10.1038/nature11884 Redis, 2012, Cell-to-cell miRNA transfer: from body homeostasis to therapy, Pharmacol. Ther., 136, 169, 10.1016/j.pharmthera.2012.08.003 Yang, 2011, Microvesicles secreted by macrophages shuttle invasion-potentiating microRNAs into breast cancer cells, Mol. Cancer, 10, 117, 10.1186/1476-4598-10-117 Yang, 2012, MicroRNA-34 suppresses breast cancer invasion and metastasis by directly targeting Fra-1, Oncogene, 32, 4294, 10.1038/onc.2012.432 Crawford, 2012, Diagnostic performance of PCA3 to detect prostate cancer in men with increased prostate specific antigen: a prospective study of 1,962 cases, J. Urol., 188, 1726