Native rhizobacteria suppresses spot blotch disease, improves growth and yield of wheat under salt–affected soils

Abdel-Kader, 2023, Soil drenching and foliar spray with bioagents for reducing wheat leaf diseases under natural field conditions, J. Plant Dis. Prot., 130, 279, 10.1007/s41348-023-00705-z Acharya, 2011, Bipolaris sorokiana (Sacc.) Shoem.: the most destructive wheat fungal pathogen in the warmer areas, Aust. J. Crop Sci., 5, 1064 Ahmed, 2014, Siderophores in environmental research: roles and applications, Microb. Biotechnol., 7, 196, 10.1111/1751-7915.12117 Ali, 2014, Amelioration of high salinity stress damage by plant growth-promoting bacterial endophytes that contain ACC deaminase, Plant Physiol. Biochem., 80, 160, 10.1016/j.plaphy.2014.04.003 Alvindia, 2009, Biocontrol activities of Bacillus amyloliquefaciens DGA14 isolated from banana fruit surface against banana crown rot-causing pathogens, Crop Prot., 28, 236, 10.1016/j.cropro.2008.10.011 Amna, 2020, Multi-stress tolerant PGPR Bacillus xiamenensis PM14 activating sugarcane (Saccharum officinarum L.) red rot disease resistance, Plant Physiol. Biochem. PPB, 151, 640, 10.1016/j.plaphy.2020.04.016 Arfaoui, 2018, Isolation and identification of cultivated bacteria associated with soybeans and their biocontrol activity against Phytophthora sojae, BioControl, 63, 607, 10.1007/s10526-018-9873-9 Bakker, 1987, Microbial cyanide production in the rhizosphere in relation to potato yield reduction and pseudomonas SPP-mediated plant growth-stimulation, Soil Biol. Biochem., 19, 451, 10.1016/0038-0717(87)90037-X Barnawal, 2014, ACC deaminase-containing Arthrobacter protophormiae induces NaCl stress tolerance through reduced ACC oxidase activity and ethylene production resulting in improved nodulation and mycorrhization in pisum sativum, J. Plant Physiol., 171, 884, 10.1016/j.jplph.2014.03.007 Barton, 1948, Photometric analysis of phosphate rock, Anal. Chem., 20, 1068, 10.1021/ac60023a024 Basak, N., Barman, A., Sundha, P., Rai, A.K., 2020. Recent trends in soil salinity appraisal and management, in: Rakshit, A., Ghosh, S., Chakraborty, S., Philip, V., Datta, A. (Eds.), Soil Analysis: Recent Trends and Applications. Springer, Singapore. doi:10.1007/978-981-15-2039-6_9. Bates, 1973, Rapid determination of free proline for water-stress studies, Plant Soil, 39, 205, 10.1007/BF00018060 Beauchamp, 1971, Superoxide dismutase: improved assays and an assay applicable to acrylamide gels, Anal. Biochem., 44, 276, 10.1016/0003-2697(71)90370-8 Berendsen, 2012, The rhizosphere microbiome and plant health, Trends Plant Sci., 17, 478, 10.1016/j.tplants.2012.04.001 Bhat, 2022, The role of plant-associated rhizobacteria in plant growth, biocontrol and abiotic stress management, J. Appl. Microbiol., 133, 2717, 10.1111/jam.15796 Blumer, 2000, Mechanism, regulation, and ecological role of bacterial cyanide biosynthesis, Arch. Microbiol., 173, 170, 10.1007/s002039900127 Bric, 1991, Rapid in situ assay for indoleacetic acid production by bacteria immobilized on a nitrocellulose membrane, Appl. Environ. Microbiol., 57, 535, 10.1128/aem.57.2.535-538.1991 Camacho-Luna, 2023, Trichoderma longibrachiatum, a biological control agent of sclerotium cepivorum on onion plants under salt stress, Biol. Control, 180, 10.1016/j.biocontrol.2023.105168 Chandra, 2020, Culturable microbial diversity in the rhizosphere of different biotypes under variable salinity, Trop. Ecol., 61, 291, 10.1007/s42965-020-00089-3 Chandra, 2021, Plant growth promoting Bacillus-based bio formulations improve wheat rhizosphere biological activity, nutrient uptake and growth of the plant, Acta Physiol. Plant, 43, 139, 10.1007/s11738-021-03310-5 Chandra, 2022, Native arbuscular mycorrhizal fungi improve growth, biomass yield, and phosphorus nutrition of sorghum in saline and sodic soils of the semi–arid region, Environ. Exp. Bot., 201, 10.1016/j.envexpbot.2022.104982 Chandra, 2018, Isolation and molecular characterization of plant growth-promoting bacillus spp. and their impact on sugarcane (Saccharum spp. hybrids) growth and tolerance towards drought stress, Acta Physiol. Plant, 40, 199, 10.1007/s11738-018-2770-0 Chandra, 2021, Strategies to mitigate the adverse effect of drought stress on crop plants—Influences of soil bacteria: a review, Pedosphere, 31, 496, 10.1016/S1002-0160(20)60092-3 Chowdhury, 2013, Spot blotch disease of wheat - a new thrust area for sustaining productivity, J. Wheat Res., 5, 1 Cobb, 2016, The role of arbuscular mycorrhizal fungi in grain production and nutrition of sorghum genotypes: enhancing sustainability through plant-microbial partnership, Agric. Ecosyst. Environ., 233, 432, 10.1016/j.agee.2016.09.024 Cooper, 2008, The inhibition of mitochondrial cytochrome oxidase by the gases carbon monoxide, nitric oxide, hydrogen cyanide and hydrogen sulfide: chemical mechanism and physiological significance, J. Bioenerg. Biomembr., 40, 533, 10.1007/s10863-008-9166-6 Dey, 2012, Influence of soil and plant types on diversity of rhizobacteria, Proc. Natl. Acad. Sci. India Sect. B Biol. Sci., 82, 341, 10.1007/s40011-012-0030-4 Dick, 1997, Soil enzyme activities and biodiversity measurements as integrative microbiological indicators, Methods Assess. Soil Qual. Ding, 2023, Isolation and identification of Bacillus mojavensis YL-RY0310 and its biocontrol potential against Penicillium expansum and patulin in apples, Biol. Control, 182, 10.1016/j.biocontrol.2023.105239 Dixon, 2003, VEGAN, a package of R functions for community ecology, J. Veg. Sci., 14, 927, 10.1111/j.1654-1103.2003.tb02228.x Doornbos, 2012, Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. a review, Agron. Sustain. Dev., 32, 227, 10.1007/s13593-011-0028-y Duveiller, 2000, Pathogenicity of bipolaris sorokiniana isolates from wheat roots, leaves and grains in Mexico, Plant Pathol., 49, 235, 10.1046/j.1365-3059.2000.00443.x 2022, Halt soil salinization, boost soil productivity Fatima, 2022, Role of metabolites produced by plant growth-promoting bacteria in biocontrol of phytopathogens under saline conditions, 287 Figueroa-López, 2016, Rhizospheric bacteria of maize with potential for biocontrol of Fusarium verticillioides, Springerplus, 5, 330, 10.1186/s40064-016-1780-x Fitriatin, 2019, In vitro test for compatibility of biofertilizers containing phosphate solubilizers and nitrogen-fixing bacteria, IOP Conf. Ser. Earth Environ. Sci., 393, 12049, 10.1088/1755-1315/393/1/012049 Gauillard, 1993, New spectrophotometric assay for polyphenol oxidase activity, Anal. Biochem., 215, 59, 10.1006/abio.1993.1554 Germida, 1998, Diversity of root-associated bacteria associated with field-grown canola (Brassica napus L.) and wheat (Triticum aestivum L.), FEMS Microbiol. Ecol., 26, 43, 10.1111/j.1574-6941.1998.tb01560.x Glick, 2005, Modulation of plant ethylene levels by the bacterial enzyme ACC deaminase, FEMS Microbiol. Lett., 251, 1, 10.1016/j.femsle.2005.07.030 Glick, 1998, A model for the lowering of plant ethylene concentrations by plant growth-promoting bacteria, J. Theor. Biol., 190, 63, 10.1006/jtbi.1997.0532 Godara, 2012, Characterization of multifaceted Bacillus sp. RM-2 for its use as plant growth promoting bioinoculant for crops grown in semi arid deserts, Appl. Soil Ecol., 59 Gupt, 2021, Spot blotch disease of wheat as influenced by foliar trichome and stomata density, J. Agric. Food Res., 6 Gupta, 2018, Spot blotch disease of wheat: the current status of research on genetics and breeding, Plant Pathol., 67, 508, 10.1111/ppa.12781 Heath, 1968, Photoperoxidation in isolated chloroplasts. I. Kinetics and stoichiometry of fatty acid peroxidation, Arch. Biochem. Biophys., 125, 189, 10.1016/0003-9861(68)90654-1 Jackson, 1967, 498 Jamali, 2020, Biocontrol potential of bacillus subtilis RH5 against sheath blight of rice caused by Rhizoctonia solani, J. Basic Microbiol., 60, 268, 10.1002/jobm.201900347 Ji, 2020, Enhancement of growth and salt tolerance of rice seedlings (Oryza sativa L.) by regulating ethylene production with a novel halotolerant PGPR strain glutamicibacter sp. YD01 containing ACC deaminase activity, Acta Physiol. Plant, 42, 42, 10.1007/s11738-020-3034-3 Kaiser, 2001, Phylogenetic analysis of microbial diversity in the rhizoplaneof oilseed rape (Brassica napus cv. Westar) employingcultivation-dependent and cultivation-independent approaches, Microb. Ecol., 42, 136, 10.1007/s002480000121 Kaoping, 2019, Salinity is a key determinant for soil microbial communities in a desert ecosystem, mSystems, 4 Katznelson, 1959, Metabolic activity and phosphate-dissolving capability of bacterial isolates from wheat roots, rhizosphere, and non-rhizosphere soil, Can. J. Microbiol., 5, 79, 10.1139/m59-010 Khan, 1986, A new simple spectrophotometric assay of phenylalanine ammonia-lyase, Curr. Sci., 55, 391 Kimura, 1980, A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences, J. Mol. Evol., 16, 111, 10.1007/BF01731581 Kowalchuk, 2002, Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms, Antonie Leeuwenhoek, 81, 509, 10.1023/A:1020565523615 Liu, 2016, Induction of systemic resistance in Chinese cabbage against black rot by plant growth-promoting rhizobacteria, Biol. Control, 99, 8, 10.1016/j.biocontrol.2016.04.007 Lotfi, 2022, Characterization of plant growth-promoting rhizobacteria (PGPR) in Persian walnut associated with drought stress tolerance, Sci. Rep., 12, 12725, 10.1038/s41598-022-16852-6 Maharshi, 2021, Salt stress alters pathogenic behaviour of fusarium oxysporum f. sp. ciceris and contributes to severity in chickpea wilt incidence, Physiol. Mol. Plant Pathol., 113, 10.1016/j.pmpp.2021.101602 McLean, 2022, Efficacy of spot form of net blotch suppression in barley from seed, fertiliser and foliar applied fungicides, Crop Prot., 153, 10.1016/j.cropro.2021.105865 Meena, 2001, Biological control of root rot of groundnut with antagonistic Pseudomonas fluorescens strains, Z. Pflanzenkr. Pflanzenschutz, 108, 369 Miller, 1959, Use of dinitrosalicylic acid reagent for determination of reducing sugar, Anal. Chem., 31, 426, 10.1021/ac60147a030 Morales, 2019, Malondialdehyde: facts and artifacts, Plant Physiol., 10.1104/pp.19.00405 Nandi, 2017, Hydrogen cyanide, which contributes to Pseudomonas chlororaphis strain PA23 biocontrol, is upregulated in the presence of glycine, Biol. Control, 108, 47, 10.1016/j.biocontrol.2017.02.008 Olanrewaju, 2017, Mechanisms of action of plant growth promoting bacteria, World J. Microbiol. Biotechnol., 33, 197, 10.1007/s11274-017-2364-9 Pandey, 2023, Trichoderma reesei induces defense-related biochemical markers associated with resistance to Fusarium dieback in tea crop, Biol. Control, 180, 10.1016/j.biocontrol.2023.105200 Peng, 2005, Transport and partitioning of phosphorus in wheat as affected by P withdrawal during flag-leaf expansion, Plant Soil, 268, 1, 10.1007/s11104-004-0297-1 Penrose, 2003, Methods for isolating and characterizing ACC deaminase-containing plant growth-promoting rhizobacteria, Physiol. Plant, 118, 10, 10.1034/j.1399-3054.2003.00086.x Pérez, 2002, The expression of extracellular fungal cell wall hydrolytic enzymes in different Trichoderma harzianum isolates correlates with their ability to control pyrenochaeta lycopersici, Biol. Res., 35, 401, 10.4067/S0716-97602002000300014 Pikovskaya, 1948, Mobilization of phosphorus in soil in connection with the vital activity of some microbial species, Microbiology, 17, 362 Rai, 2022, Bioenergy sorghum as balancing feedback loop for intensification of cropping system in salt-affected soils of the semi–arid region: energetics, biomass quality and soil properties, Eur. J. Agron., 134, 10.1016/j.eja.2021.126452 Rai, 2021, Phosphorus nutrition of oats genotypes in acidic soils: exploiting responsive plant-microbe partnership, Appl. Soil Ecol., 167, 10.1016/j.apsoil.2021.104094 Rai, 2020, Salinity and sodicity influence mutualistic association of beneficial microorganism in arid soils, J. Soil Salin. Water Qual., 12, 15 Riungu, 2008, Management of fusarium head blight of wheat and deoxynivalenol accumulation using antagonistic microorganisms, Plant Pathol. J., 7, 10.3923/ppj.2008.13.19 Roy, 2023, Managing spot blotch disease in wheat: conventional to molecular aspects, Front. Plant Sci., 10.3389/fpls.2023.1098648 Sabaté, 2017, Decrease in the incidence of charcoal root rot in common bean (Phaseolus vulgaris L.) by Bacillus amyloliquefaciens B14, a strain with PGPR properties, Biol. Control, 113, 1, 10.1016/j.biocontrol.2017.06.008 Saha, 2013, Microbial siderophores: a mini review, J. Basic Microbiol., 53, 303, 10.1002/jobm.201100552 Santoyo, 2021, Rhizosphere colonization determinants by plant growth-promoting rhizobacteria (PGPR), Biology, 10.3390/biology10060475 Schwyn, 1987, Universal chemical assay for the detection and determination of siderophores, Anal. Biochem., 160, 47, 10.1016/0003-2697(87)90612-9 Shoaib, 2018, Influence of salinity and Fusarium oxysporum as the stress factors on morpho-physiological and yield attributes in onion, Physiol. Mol. Biol. Plants, 24, 1093, 10.1007/s12298-018-0570-z Simine, 1998, Solubilization of zinc phosphate by a strain of Pseudomonas fluorescens isolated from a forest soil, Biol. Fertil. Soils, 28, 87, 10.1007/s003740050467 Singh, 2023, Rhizobacteria improve rice zinc nutrition in deficient soils, Rhizosphere, 25, 10.1016/j.rhisph.2022.100646 Singh, 2015, The plant-growth-promoting bacterium Klebsiella sp. SBP-8 confers induced systemic tolerance in wheat (Triticum aestivum) under salt stress, J. Plant Physiol., 184, 57, 10.1016/j.jplph.2015.07.002 Singh, 2022, Genetics of spot blotch resistance in bread wheat (Triticum aestivum L.) using five models for GWAS, Front. Plant Sci., 13 Sundha, 2023, Irrigation water quality, gypsum, and city waste compost addition affect P dynamics in saline-sodic soils, Environ. Res., 216, 10.1016/j.envres.2022.114559 Swain, 2008, Biocontrol efficacy of bacillus subtilis strains isolated from cow dung against postharvest yam (Dioscorea rotundata L.) pathogens, Curr. Microbiol., 57, 407, 10.1007/s00284-008-9213-x Tabassum, 2017, Bottlenecks in commercialisation and future prospects of PGPR, Appl. Soil Ecol., 121, 102, 10.1016/j.apsoil.2017.09.030 Tamura, 2021, MEGA11: molecular evolutionary genetics analysis version 11, Mol. Biol. Evol., 38, 3022, 10.1093/molbev/msab120 Triky-Dotan, 2005, Development of crown and root rot disease of tomato under irrigation with saline water, Phytopathology, 95, 1438, 10.1094/PHYTO-95-1438 Upadhyay, 2011, Exopolysaccharide-producing plant growth-promoting rhizobacteria under salinity condition, Pedosphere, 21, 214, 10.1016/S1002-0160(11)60120-3 Urquhart, 2002, Hydrolytic enzymes and antifungal compounds produced by tilletiopsis species, phyllosphere yeasts that are antagonists of powdery mildew fungi, Can. J. Microbiol., 48, 219, 10.1139/w02-008 Vance, 1987, An extraction method for measuring soil microbial biomass C, Soil Biol. Biochem., 19, 703, 10.1016/0038-0717(87)90052-6 Veliz, 2017, Chitinase-producing bacteria and their role in biocontrol, AIMS Microbiol., 3, 689, 10.3934/microbiol.2017.3.689 Vetter, 1958, Enzyme assay, quantitative determination of peroxidase in sweet corn, J. Agric. Food Chem., 6, 39, 10.1021/jf60083a006 Villa-Rodríguez, 2019, Bacillus subtilis TE3: a promising biological control agent against bipolaris sorokiniana, the causal agent of spot blotch in wheat (Triticum turgidum L. subsp. durum), Biol. Control, 132, 135, 10.1016/j.biocontrol.2019.02.012 Voisard, 1989, Cyanide production by pseudomonas fluorescens helps suppress black root rot of tobacco under gnotobiotic conditions, EMBO J., 8, 351, 10.1002/j.1460-2075.1989.tb03384.x Voroney, 1984, Determination of kC and kN in situ for calibration of the chloroform fumigation-incubation method, Soil Biol. Biochem., 16, 9, 10.1016/0038-0717(84)90117-2 Wang, 2023, Bacillus amyloliquefaciens FG14 as a potential biocontrol strain against rusty root rot of Panax ginseng, and its impact on the rhizosphere microbial community, Biol. Control, 182, 10.1016/j.biocontrol.2023.105221 Wang, 2013, Bacillus cereus AR156 induces resistance against Rhizopus rot through priming of defense responses in peach fruit, Food Chem., 136, 400, 10.1016/j.foodchem.2012.09.032 Wei, T., Simko, V. (2017) R Package “Corrplot”: Visualization of a Correlation Matrix (Version 0.84). https://github.com/taiyun/corrplot. Xu, 2020, Evaluation of the biocontrol potential of bacillus sp. WB against Fusarium oxysporum f. sp. niveum, Biol. Control, 147, 10.1016/j.biocontrol.2020.104288 Yun, 2018, Piriformospora indica improves salinity stress tolerance in Zea mays L. plants by regulating Na+ and K+ loading in root and allocating K+ in shoot, Plant Growth Regul., 86, 323, 10.1007/s10725-018-0431-3 Zhang, 2023, Microbial diversity and functions in saline soils: a review from a biogeochemical perspective, J. Adv. Res., 10.1016/j.jare.2023.06.015