NMR Techniques in Metabolomic Studies: A Quick Overview on Examples of Utilization
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K.R. Pomraning, S. Wei, S.A. Karagiosis, Y.-M. Kim, A.C. Dohnalkova, B.W. Arey, E.L. Bredeweg, G. Orr, T.O. Metz, S.E. Baker, PLoS One 10, 4 (2015)
L. Brennan, Prog. Nucl. Magn. Reson. Spectrosc. 83, 42–49 (2014)
N.J. Serkova, C.U. Niemann, Expert Rev. Mol. Diagn. 6(5), 717–731 (2006)
A. Zhang, H. Sun, P. Wang, Y. Han, X. Wang, Analyst 137, 293–300 (2012)
S. Moco, J. Vervoort, S. Moco, R.J. Bino, R.C.H. De Vos, R. Bino, TrAC. Trends Anal. Chem. 26(9), 855–866 (2007)
N.V. Reo, Drug Chem. Toxicol. 25(4), 375–382 (2002)
R. Verpoorte, Y.H. Choi, H.K. Kim, Phytochem. Rev. 6, 3–14 (2007)
H.A. Scheidt, S. Schibur, A. Magalhães, E.R. de Azevedo, T.J. Bonagamba, O. Pascui, R. Schulz, D. Reichert, D. Huster, Biopolymers 93(6), 520–532 (2010)
G.S. Payne, H. Troy, S.J. Vaidya, J.R. Griffiths, M.O. Leach, Y.L. Chung, NMR Biomed. 19(5), 593–598 (2006)
J. Xu, P. Zhu, Z. Gan, N. Sahar, M. Tecklenburg, M.D. Morris, D.H. Kohn, A. Ramamoorthy, J. Am. Chem. Soc. 132(33), 11504–11509 (2010)
Z.-Z. Li, Q.-X. Guo, T. Ren, X.-Q. Zhu, Y-Ch. Liu, J. Inclusion. Phenom. Mol. Recogn. Chem. 15(1), 37–42 (1993)
R.M. Silverstein, F.X. Webster, D.J. Kiemle, Spektroskopowe Metody Identyfikacji Związków Organicznych (Warszawa, Wydawnictwo Naukowe PWN, 2007), pp. 138–139
D. Wishart, TrAC Trends Anal. Chem. 27(3), 228–237 (2007)
R. Schicho, R. Shaykhutdinov, J. Ngo, A. Nazyrova, C. Schneide, R. Panaccione, G.G. Kaplan, H.J. Vogel, M. Storr, J. Proteome. Res. 11(6), 3344–3457 (2012)
O. Risa, T.M. Melø, U. Sonnewald, NMR Biomed. 22(3), 266–271 (2009)
M.D. Cao, B. Sitter, T.F. Bathen, A. Bofin, P.E. Lønning, S. Lundgren, I.S. Gribbestad, NMR Biomed. 25(2), 369–378 (2012)
L. Da Silva, M. Godejohann, F.-P.J. Martin, S. Collino, A. Bürkle, M. Moreno-Villanueva, J. Bernhardt, O. Toussaint, B. Grubeck-Loebenstein, E.S. Gonos, E. Sikora, T. Grune, N. Breusing, C. Franceschi, A. Hervonen, M. Spraul, S. Moco, Anal. Chem. 85(12), 5801–5809 (2013)
T. Ye, C. Zheng, S. Zhang, G.A. Gowda, O. Vitek, D. Raftery, Anal. Chem. 84(2), 994–1002 (2012)
N. Araníbar, K.H. Ott, V. Roongta, L. Mueller, Anal. Biochem. 355(1), 62–70 (2006)
D.H. Zhou, C.M. Rienstra, J. Magn. Reson. 192(1), 167–172 (2008)
T. Ye, Ch. Zheng, S. Zhang, G.A. Nagana Gowgall, O. Vitek, D. Raftery, Anal. Chem. 84(2), 994–1002 (2012)
H.R. Tank, Y.L. Wang, J.K. Nicholson, Anal. Biochem. 325(2), 260–272 (2004)
X. Zhang, L. Xu, J. Shen, B. Cao, T. Cheng, T. Zhao, X. Liu, H. Zhang, Biochim. Biophys. Acta 1832(8), 1207–1216 (2013)
T.W.M. Fan, Prog. Nucl. Magn. Reson. Spectrosc. 28, 161–219 (1996)
A. Smolinska, J.M. Posma, L. Blanchet, K.A. Ampt, A. Atalli, T. Tuinstra, T. Luider, M. Doskocz, P.J. Michiels, F.C. Girard, L.M. Buydens, S.S. Wijmenga, Anal. Bioanal. Chem. 403(4), 947–959 (2012)
D.S. Wishart, M.J. Lewis, J.A. Morrissey, M.D. Flegel, K. Jeroncic, Y. Xiong, D. Cheng, R. Eisner, B. Gautam, D. Tzur, S. Sawhney, F. Bamforth, R. Greiner, L. Li, J. Chromatogr. B. Analyt. Technol. Biomed. Life Sci. 871(2), 164–173 (2008)
N. Psychogios, D.D. Hau, J. Peng, A.C. Guo, R. Mandal, S. Bouatra, I. Sinelnikov, R. Krishnamurthy, R. Eisner, B. Gautam, N. Young, J. Xia, C. Knox, E. Dong, P. Huang, Z. Hollander, T.L. Pedersen, S.R. Smith, F. Bamforth, R. Greiner, B. McManus, J.W. Newman, T. Goodfriend, D.S. Wishart, PLoS One 6(2), e16957 (2011)
S. Bouatra, F. Aziat, R. Mandal, A.C. Guo, M.R. Wilson, C. Knox, T.C. Bjorndahl, R. Krishnamurthy, F. Saleem, P. Liu, Z.T. Dame, J. Poelzer, J. Huynh, F.S. Yallou, N. Psychogios, E. Dong, R. Bogumil, C. Roehring, D.S. Wishart, PLoS One 8(9), e73076 (2013)
K.N. Patel, J.K. Patel, M.P. Patel, G.C. Rajput, H.A. Patel, Pharm. Methods 1(1), 2–13 (2010)
R.A. Shaykhutdinov, G.D. MacInnis, R. Dowlatabadi, A.M. Weljie, H.J. Vogel, Metabolomics 5(3), 307–317 (2009)
F. Weber, J. Böhme, H.A. Scheidt, W. Gründer, S. Rammelt, M. Hacker, M. Schulz-Siegmund, D. Huster, NMR Biomed. 25(3), 464–475 (2012)
A. Wong, P.M. Aguiar, D. Sakellariou, Magn. Reson. Med. 63(2), 269–274 (2010)
Y. Xi, J.S. de Ropp, M.R. Viant, D.L. Woodruff, P. Yu, Anal. Chim. Acta 614(2), 127–133 (2008)
A. Kaflak-Hachulska, A. Samoson, W. Kolodziejski, Calcif. Tissue Int. 73(5), 476–486 (2003)
Y. Wu, J.L. Ackerman, E.S. Strawich, C. Rey, H.M. Kim, M.J. Glimcher, Calcif. Tissue Int. 72(5), 610–626 (2003)
A. Kaflak, D. Chmielewski, A. Górecki, A. Slosarczyk, W. Kolodziejski, Solid State Nucl. Magn. Reson. 29(4), 345–348 (2006)
A. Kaflak, W. Kolodziejski, Magn. Reson. Chem. 46(4), 335–341 (2008)
R.L. Johnson, K. Schmid, – Rohr. J. Magn. Reson. 239, 44–49 (2014)
K.H. Mroue, N. MacKinnon, J. Xu, P. Zhu, E. McNerny, D.H. Kohn, M.D. Morris, A. Ramamoorthy, J. Phys. Chem. B. 116(38), 11656–11661 (2012)
Y. Yang, L. Chen, H. Gao, D. Zeng, Y. Yue, M. Liu, H. Lei, F. Deng, C. Ye, Magn. Reson. Chem. 44(3), 263–268 (2006)
D. Zietkowski, R.L. Davidson, T.R. Eykyn, S.S. De Silva, N.M. Desouza, G.S. Payne, NMR Biomed. 23(4), 382–390 (2010)
O.M. Rooney, J. Troke, J.K. Nicholson, J.L. Griffin, Magn. Reson. Med. 50(5), 925–930 (2003)
D. Courtier-Murias, H. Farooq, H. Masoom, A. Botana, R. Soong, J.G. Longstaffe, M.J. Simpson, W.E. Maas, M. Fey, B. Andrew, J. Struppe, H. Hutchins, S. Krishnamurthy, R. Kumar, M. Monette, H.J. Stronks, A. Hume, A.J. Simpson, J. Magn. Reson. 217, 61–76 (2012)
S. Eriksson, S. Lasic, D. Topgaard, J. Magn. Reson. 226, 13–18 (2013)
P. Porcari, S. Capuani, E.D. Amore, M. Lecce, A. La Bella, F. Fasano, R. Campanella, L.M. Migneco, F.S. Pastore, B. Maraviglia, Phys. Med. Biol. 53(23), 6979–6989 (2008)
P. Porcari, S. Capuani, R. Campanella, A. La Bella, L.M. Migneco, B. Maraviglia, Phys. Med. Biol. 51(12), 3141–3154 (2006)
W. Cui, P. Otten, Y. Li, K.S. Koeneman, J. Yu, R.P. Mason, Magn. Reson. Med. 51, 616–620 (2004)
M.G. Boersma, I.P. Solyanikova, W.J.H. Van Berkel, J. Vervoort, I.M.C.M. Rietjens, J. Ind. Microbiol. Biotechnol. 26(1–2), 22–34 (2001)
M. Satake, B. Dmochowska, Y. Nishikawa, J. Madaj, J. Xue, Z. Guo, D.V. Reddy, P.L. Rinaldi, V.M. Monnier, Invest. Ophthalmol. Vis. Sci. 44(5), 2047–2058 (2003)
J. Ruiz-Cabello, B.P. Barnett, P.A. Bottomley, J.W.M. Bulte, NMR Biomed. 24(2), 114–129 (2011)
M. Veronesi, F. Giacomina, E. Romeo, B. Castellani, G. Ottonello, C. Lambruschini, G. Garau, R. Scarpelli, T. Bandiera, D. Piomelli, C. Dalvit, Anal. Biochem. 495, 52–59 (2016)
N. Aranibar, J.D. Vassallo, J. Rathmacher, S. Stryker, Y. Zhang, J. Dai, E.B. Janovitz, D. Robertson, M. Reily, L. Lowe-Krentz, L. Lehman-McKeeman, Anal. Biochem. 410(1), 84–91 (2011)
C.E. Garner, S.C. Sumner, J.G. Davis, J.P. Burgess, Y. Yueh, J. Demeter, Q. Zhan, J. Valentine, A.R. Jeffcoat, L.T. Burka, J.M. Mathews, Toxicol. Appl. Pharmacol. 215(1), 23–36 (2006)
S.H. Moolenaar, U.F. Engelke, N.G. Abeling, H. Mandel, M. Duran, R.A. Wevers, J. Inherit. Metab. Dis. 24(8), 843–850 (2001)
M.K. Engskog, O. Karlsson, J. Haglöf, A. Elmsjö, E. Brittebo, T. Arvidsson, C. Pettersson, Toxicology 312, 6–11 (2013)
E.G. Stanley, N.J. Bailey, M.E. Bollard, J.N. Haselden, C.J. Waterfield, E. Holmes, J.K. Nicholson, Anal. Biochem. 343(2), 195–202 (2005)
D. Misra, U. Bajpaic, Bull. Chem. Soc. Ethiop. 23(2), 211–221 (2009)
J.S. McKenzie, A.J. Charlton, J.A. Donarski, A.D. MacNicoll, J.C. Wilson, Metabolomics 6(4), 574–582 (2010)
H. Koskela, O. Heikkilä, I. Kilpeläinen, S. Heikkinen, J. Magn. Reson. 202(1), 24–33 (2010)
E. Appiah-Amponsah, K. Owusu-Sarfo, G.A. Gowda, T. Ye, D. Raftery, Metabolites 3, 575–591 (2013)
K. Hu, W.M. Westler, J.L. Markley, J. Am. Chem. Soc. 133(6), 1662–1665 (2011)
L. Zhao, H. Gao, F. Lian, X. Liu, Y. Zhao, D. Lin, Am. J. Physiol. Renal. Physiol. 300(4), F947–F956 (2011)
S. De Sanctis, W.M. Malloni, W. Kremer, A.M. Tomé, E.W. Lang, K.P. Neidig, H.R. Kalbitzer, J. Magn. Reson. 210(2), 177–183 (2011)
J.S. McKenzie, J.A. Donarski, J.C. Wilson, A.J. Charlton, Prog. Nucl. Magn. Reson. Spectrosc. 59(4), 336–539 (2011)
E. Martineau, I. Tea, S. Akoka, P. Giraudeau, NMR Biomed. 25(8), 985–992 (2012)
E. Martineau, P. Giraudeau, I. Tea, S. Akoka, J. Pharm. Biomed. Anal. 54(1), 252–257 (2011)
P. Sandusky, E. Appiah-Amponsah, D. Raftery, J. Biomol. NMR. 49(3–4), 281–290 (2011)
A.N. Lane, T.W.M. Fan, Metabolomics 3(2), 79–86 (2007)
J.C. Lindon, J.K. Nicholson, Annu. Rev. Anal. Chem. (Palo Alto Calif). 1, 45–69 (2008)
A. Beltran, M. Suarez, M.A. Rodríguez, M. Vinaixa, S. Samino, L. Arola, X. Correig, O. Yanes, Anal. Chem. 84(14), 5838–5844 (2012)
R.K. Adosraku, G.T. Choi, V. Constantinou-Kokotos, M.M. Anderson, W.A. Gibbons, J. Lipid Res. 35, 1925–1931 (1994)
H.J. Schneider, U. Buchheit, N. Becker, G. Schmidt, U. Siehl 107(24), 7027–7039 (1985)
J.U. Thomsen, B. Meyer, J. Magn. Reson. 84(1), 212–217 (1989)
M.S. Hodavance, S.L. Ralston, I. Pelczer 387(2), 533–537 (2007)