Mycobacterium tuberculosis Central Asian Strain (CAS) lineage strains in Pakistan reveal lower diversity of MIRU loci than other strains
Tài liệu tham khảo
WHO, World Health Organization Report, Global Tuberculosis Control, 2011.
WHO, World Health Organization Report, Global Tuberculosis Control, 2008.
Hasan, 2009, Trends in Mycobacterium tuberculosis resistance, Pakistan, 1990–2007, Int. J. Infect. Dis., 13, e377, 10.1016/j.ijid.2009.01.008
Gutacker, 2006, Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from 4 geographic sites, J. Infect. Dis., 193, 121, 10.1086/498574
Sreevatsan, 1997, Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination, Proc. Natl. Acad. Sci. U.S.A., 94, 9869, 10.1073/pnas.94.18.9869
Shamputa, 2010, Genetic diversity of Mycobacterium tuberculosis isolates from a tertiary care tuberculosis hospital in South Korea, J. Clin. Microbiol., 48, 387, 10.1128/JCM.02167-09
Supply, 2006, Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosis, J. Clin. Microbiol., 44, 4498, 10.1128/JCM.01392-06
Calver, 2010, Emergence of increased resistance and extensively drug-resistant tuberculosis despite treatment adherence, South Africa, Emerg. Infect. Dis., 16, 264, 10.3201/eid1602.090968
Gandhi, 2010, Multidrug-resistant and extensively drug-resistant tuberculosis: a threat to global control of tuberculosis, Lancet, 375, 1830, 10.1016/S0140-6736(10)60410-2
Niemann, 2010, Mycobacterium tuberculosis Beijing lineage favors the spread of multidrug-resistant tuberculosis in the Republic of Georgia, J. Clin. Microbiol., 48, 3544, 10.1128/JCM.00715-10
Said, 2012, Molecular characterization and second-line anti-TB drug-resistance patterns of multidrug resistant tuberculosis isolates from the northern region of South Africa, J. Clin. Microbiol., 50, 2857, 10.1128/JCM.00358-12
Hasan, 2010, Extensively drug-resistant tuberculosis, Pakistan, Emerg. Infect. Dis., 16, 1473, 10.3201/eid1609.100280
Tanveer, 2008, Genotyping and drug resistance patterns of M. tuberculosis strains in Pakistan, BMC Infect. Dis., 8, 171, 10.1186/1471-2334-8-171
Hasan, 2006, Spoligotyping of Mycobacterium tuberculosis isolates from Pakistan reveals predominance of Central Asian Strain 1 and Beijing isolates, J. Clin. Microbiol., 44, 1763, 10.1128/JCM.44.5.1763-1768.2006
Chatterjee, 2013, MIRU-VNTR profiles of three major Mycobacterium tuberculosis spoligotypes found in western India, Tuberculosis (Edinb), 93, 250, 10.1016/j.tube.2012.10.004
Wang, 2011, Genotypes and characteristics of clustering and drug susceptibility of Mycobacterium tuberculosis isolates collected in Heilongjiang Province, China, J. Clin. Microbiol., 49, 1354, 10.1128/JCM.02274-10
Ali, 2007, Characterization of Mycobacterium tuberculosis Central Asian Strain 1 using mycobacterial interspersed repetitive unit genotyping, BMC Microbiol., 7, 76, 10.1186/1471-2180-7-76
Ayaz, 2012, Characterizing Mycobacterium tuberculosis isolates from Karachi, Pakistan: drug resistance and genotypes, Int. J. Infect. Dis., 16, e303, 10.1016/j.ijid.2011.12.015
Koneman, 1983
G.L.B.-E.B. Woods, E.P. Desmond, G.S. Hall, L. Heifets, G.E. Pfyffer, et al., Susceptibility testing of mycobacteria, nocardiae, and other aerobic actinomycetes: approved standard Wayne, PA, NCCLS, 2003. Document No. M24-A. 2003.
Hunter, 1988, Numerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversity, J. Clin. Microbiol., 26, 2465, 10.1128/JCM.26.11.2465-2466.1988
Sola, 2003, Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics, Infect. Genet. Evol., 3, 125, 10.1016/S1567-1348(03)00011-X
Varma-Basil, 2011, Comparison of spoligotyping, mycobacterial interspersed repetitive units typing and IS6110-RFLP in a study of genotypic diversity of Mycobacterium tuberculosis in Delhi, North India, Mem. Inst. Oswaldo Cruz, 106, 524, 10.1590/S0074-02762011000500002
Comas, 2009, Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies, PLoS ONE, 4, e7815, 10.1371/journal.pone.0007815
Jiao, 2008, Evaluation of new variable-number tandem-repeat systems for typing Mycobacterium tuberculosis with Beijing genotype isolates from Beijing, China, J. Clin. Microbiol., 46, 1045, 10.1128/JCM.01869-07
Mokrousov, 2008, Genetic geography of Mycobacterium tuberculosis Beijing genotype: a multifacet mirror of human history?, Infect. Genet. Evol., 8, 777, 10.1016/j.meegid.2008.07.003
Mokrousov, 2008, Mycobacterium tuberculosis Beijing genotype in Russia: in search of informative variable-number tandem-repeat loci, J. Clin. Microbiol., 46, 3576, 10.1128/JCM.00414-08
Murase, 2008, Promising loci of variable numbers of tandem repeats for typing Beijing family Mycobacterium tuberculosis, J. Med. Microbiol., 57, 873, 10.1099/jmm.0.47564-0
Zhou, 2011, Molecular genotyping of Mycobacterium tuberculosis in Xi’an, China, using MIRU-VNTR typing, Int. J. Tuberc. Lung Dis., 15, 517, 10.5588/ijtld.10.0495
Vadwai, 2012, Do diverse Mycobacterium tuberculosis strains circulate in Mumbai?, Asia-Pac. J. Trop. Dis., 2, S563, 10.1016/S2222-1808(12)60221-7
Haeili, 2013, Spoligotyping and drug resistance patterns of Mycobacterium tuberculosis isolates from five provinces of Iran, Microbiologyopen, 2, 988, 10.1002/mbo3.139
Stavrum, 2009, In-depth molecular characterization of Mycobacterium tuberculosis from New Delhi – predominance of drug resistant isolates of the ’modern’ (TbD1) type, PLoS ONE, 4, e4540, 10.1371/journal.pone.0004540
