Multiresistant Gram-negative bacteria: the role of high-risk clones in the dissemination of antibiotic resistance

Oxford University Press (OUP) - Tập 35 Số 5 - Trang 736-755 - 2011
Neil Woodford1, Jane F. Turton, David M. Livermore
1Microbiology Services-Colindale, Health Protection Agency, London, UK.

Tóm tắt

Từ khóa


Tài liệu tham khảo

Abdul Gafur, 2010, An obituary – on the death of antibiotics, J Assoc Physicians I, 58, 143

10.1128/JCM.00362-09

2010, Detection of Enterobacteriaceae isolates carrying metallo-beta-lactamase – United States, 2010, Morbid Mortal Wkly Rep, 59, 750

10.1128/AAC.00436-09

10.1128/JCM.43.9.4382-4390.2005

Bell JM Mathai D Jones RN Turnidge JD (2009) Emergence of OXA-48 Carbapenemases among Klebsiella spp. from India. Proceedings & abstracts of the 49th Interscience Conference on Antimicrobial Agents & Chemotherapy, American Society for Microbiology, San Francisco (abstract C2-650).

10.1128/AAC.00931-08

10.1128/JCM.00516-10

10.1086/421495

10.1128/AAC.49.2.776-778.2005

Bratu, 2005, Rapid spread of carbapenem-resistant Klebsiella pneumoniae in New York City: a new threat to our antibiotic armamentarium, Arch Intern Med, 165, 1430, 10.1001/archinte.165.12.1430

Bratu, 2005, Emergence of KPC-possessing Klebsiella pneumoniae in Brooklyn, New York: epidemiology and recommendations for detection, Antimicrob Agents Ch, 49, 3018, 10.1128/AAC.49.7.3018-3020.2005

10.1086/512370

Brisse, 2009, Virulent clones of Klebsiella pneumoniae: identification and evolutionary scenario based on genomic and phenotypic characterization, PLoS One, 4, e4982, 10.1371/journal.pone.0004982

10.1128/JCM.00640-08

10.1128/AAC.01539-07

10.1016/j.mib.2006.08.011

10.1016/j.ijantimicag.2007.12.006

10.1128/AAC.01672-07

10.1128/AAC.01312-09

10.1089/mdr.2006.12.103

10.1128/AAC.01502-07

Castanheira M Watters AA Smayevsky J Casellas JM Gur D Unal S Jones RN (2009) Emergence of bla OXA-48 among Enterobacter cloacae in Argentina and its prevalence among carbapenem non-susceptible Enterobacteriaceae. Proceedings and Abstracts of the 49th Interscience Conference on Antimicrobial Agents & Chemotherapy, American Society for Microbiology, San Francisco (abstract C2-647).

10.1016/j.ijantimicag.2009.12.009

10.1093/jac/dkn084

10.1093/jac/dkp194

10.1128/JCM.00699-06

10.1128/JCM.40.9.3300-3307.2002

10.3201/eid1402.070350

10.1128/AAC.01580-09

10.1093/jac/dkq174

10.1128/JCM.42.12.5644-5649.2004

10.1128/AAC.00543-08

10.1128/AAC.01180-07

Cuzon G Naas T Carrer A Honderlick P Cerf C Nordmann P (2009) Plasmid-mediated carbapenem-hydrolyzing β-lactamase OXA-48 in Klebsiella pneumoniae from Egypt. Proceedings and Abstracts of the 49th Interscience Conference on Antimicrobial Agents & Chemotherapy, American Society for Microbiology, San Francisco (abstract C2-649).

10.1016/j.ijantimicag.2010.02.014

10.1093/jac/dkn287

Da Silva, 2007, Identification of widespread, closely related Acinetobacter baumannii isolates in Portugal as a subgroup of European clone II, Clin Microbiol Infec, 13, 190, 10.1111/j.1469-0691.2006.01628.x

10.1093/jac/dkh269

10.1099/mic.0.023234-0

Deshpande, 2010, New Delhi Metallo-β-lactamase (NDM-1) in Enterobacteriaceae: treatment options with carbapenems compromised, J Assoc Physicans I, 58, 147

10.1016/j.ijantimicag.2010.06.007

10.1093/jac/dkq472

10.1128/JCM.43.8.4178-4182.2005

Diancourt, 2010, The population structure of Acinetobacter baumannii: expanding multiresistant clones from an ancestral susceptible genetic pool, PLoS One, 5, e10034, 10.1371/journal.pone.0010034

Diaz, 2010, Diversity of Escherichia coli strains producing extended-spectrum β-lactamases in Spain: second nationwide study, J Clin Microbiol, 48, 2840, 10.1128/JCM.02147-09

Dijkshoorn, 1996, Comparison of outbreak and nonoutbreak Acinetobacter baumannii strains by genotypic and phenotypic methods, J Clin Microbiol, 34, 1519, 10.1128/JCM.34.6.1519-1525.1996

10.1111/j.1469-0691.2010.03254.x

10.1128/AAC.00443-07

10.1128/AAC.01345-06

Donnarumma, 2010, Molecular characterization of Acinetobacter isolates collected in intensive care units of six hospitals in Florence, Italy, during a 3-year surveillance program: a population structure analysis, J Clin Microbiol, 48, 1297, 10.1128/JCM.01916-09

10.1128/AAC.01573-08

10.1111/j.1469-0691.2007.01874.x

Elias J Schoen C Heinze G Valenza G Gerharz E Riedmiller H Vogel U (2009) Nosocomial outbreak of VIM-2 metallo-β-lactamase producing Pseudomonas aeruginosa associated with retrograde urography. Clin Microbiol Infec. DOI: DOI: 10.1111/j.1469-0691.2009.03146.x.

10.1093/jac/dkl481

10.1128/AAC.00719-09

Empel, 2007, Outbreak of Pseudomonas aeruginosa Infections with PER-1 extended-spectrum β-lactamase in Warsaw, Poland: further evidence for an international clonal complex, J Clin Microbiol, 45, 2829, 10.1128/JCM.00997-07

10.1128/JCM.01361-09

10.1128/AAC.00158-08

Endimiani, 2009, Emergence of blaKPC-containing Klebsiella pneumoniae in a long-term acute care hospital: a new challenge to our healthcare system, J Antimicrob Chemoth, 64, 1102, 10.1093/jac/dkp327

10.1093/jac/dkn547

10.1093/jac/dkq004

Fam N Leflon-Guibout V Fouad S Aboul-Fadl L Marcon E Desouky D El Defrawy I Abou-Aitta A Klena J Nicolas-Chanoine MH (2010) CTX-M-15-producing Escherichia coli clinical isolates in Cairo (Egypt), including isolates of clonal complex ST10 and clones ST131, ST73, and ST405 in both community and hospital settings. Microb Drug Resist. DOI: DOI: 10.1089/mdr.2010.0063.

10.1128/JB.186.5.1518-1530.2004

10.1128/AAC.00242-10

10.1128/AAC.00012-10

10.1093/jac/dkq027

Galani, 2007, Emerging bacterial pathogens: Escherichia coli, Enterobacter aerogenes and Proteus mirabilis clinical isolates harbouring the same transferable plasmid coding for metallo-β-lactamase VIM-1 in Greece, J Antimicrob Chemoth, 59, 578, 10.1093/jac/dkl508

10.1093/jac/dkg416

10.1128/JCM.41.8.3893-3896.2003

10.1128/AAC.00690-09

Giakkoupi, 2009, KPC-2-producing Klebsiella pneumoniae infections in Greek hospitals are mainly due to a hyperepidemic clone, Euro Surveill, 14, pii 19218, 10.2807/ese.14.21.19218-en

10.1093/jac/dkp032

10.1128/JCM.00817-06

10.1093/jac/dkq048

Goldfarb, 2009, Detection of plasmid-mediated KPC-producing Klebsiella pneumoniae in Ottawa, Canada: evidence of intrahospital transmission, J Clin Microbiol, 47, 1920, 10.1128/JCM.00098-09

Goren MG Chmelnitsky I Carmeli Y Navon-Venezia S (2009) First report of plasmid encoded OXA-48-like carbapenemase in Escherichia coli from Israel. Proceedings and Abstracts of the 49th Interscience Conference on Antimicrobial Agents & Chemotherapy, American Society for Microbiology, San Francisco (abstract C1-1765).

10.1128/AAC.01359-09

10.1093/jac/dkp496

10.1093/jac/dkp099

10.1016/j.ijantimicag.2008.01.017

10.1128/JCM.02431-09

10.1128/AAC.00856-09

10.1093/jac/dkp428

10.1016/j.ijantimicag.2009.10.014

10.1128/AAC.48.11.4438-4440.2004

10.1128/JCM.43.10.5344-5347.2005

10.1186/1471-2164-9-560

10.1128/JCM.01581-09

10.1086/653932

10.1093/jac/dkn406

10.1093/jac/dkp491

10.1093/jac/dkm401

10.1093/jac/dkq273

10.1093/jac/dkq132

10.1128/JB.00698-10

Kitchel, 2009, Molecular epidemiology of KPC-producing Klebsiella pneumoniae isolates in the United States: clonal expansion of multilocus sequence type 258, Antimicrob Agents Ch, 53, 3365, 10.1128/AAC.00126-09

10.1128/AAC.00784-09

10.1099/jmm.0.018119-0

10.1093/jac/dkp142

10.1093/jac/dkq133

Kumarasamy, 2010, Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study, Lancet Infect Dis, 10, 597, 10.1016/S1473-3099(10)70143-2

10.1093/jac/dkn380

10.1128/JCM.02065-07

Leavitt, 2007, Emergence of KPC-2 and KPC-3 in carbapenem-resistant Klebsiella pneumoniae strains in an Israeli hospital, Antimicrob Agents C, 51, 3026, 10.1128/AAC.00299-07

10.1128/AAC.01818-09

10.1128/AAC.49.11.4485-4491.2005

10.1016/j.ijantimicag.2008.10.009

10.1128/JCM.00734-08

10.1556/AMicr.55.2008.4.9

10.1128/AAC.00123-09

10.1016/j.jhin.2010.01.012

Li, 2010, Streptococcus suis outbreak investigation using multiple-locus variable tandem repeat number analysis, Microbiol Immunol, 54, 380

10.1111/j.1574-695X.2008.00483.x

10.1016/j.resmic.2007.12.008

10.1007/s00284-008-9285-7

10.1128/JCM.01528-09

10.1002/elps.200500096

Lister, 2009, Antibacterial-resistant Pseudomonas aeruginosa: clinical impact and complex regulation of chromosomally encoded resistance mechanisms, Clin Microbiol Rev, 22, 582, 10.1128/CMR.00040-09

Livermore, 2007, CTX-M: changing the face of ESBLs in Europe, J Antimicrob Chemoth, 59, 165, 10.1093/jac/dkl483

Long, 2010, Pulsed-field gel electrophoresis for Salmonella infection surveillance, Texas, USA, 2007, Emerg Infect Dis, 16, 983, 10.3201/edi1606.091276

10.1128/JCM.00315-10

10.1056/NEJMoa011265

10.1128/JCM.00608-10

Meletis, 2010, Emergence of Klebsiella pneumoniae carrying blaVIM and blaKPC genes, Hippokratia, 14, 139

10.1128/JCM.01728-06

10.1128/AAC.01185-07

Mendes, 2009, Emergence and widespread dissemination of OXA-23, -24/40 and -58 carbapenemases among Acinetobacter spp. in Asia-Pacific nations: report from the SENTRY Surveillance Program, J Antimicrob Chemoth, 63, 55, 10.1093/jac/dkn434

10.1016/S0195-6701(97)90116-X

10.1093/jac/dkq155

10.1128/AAC.47.1.395-397.2003

10.1128/AAC.47.4.1297-1300.2003

10.1128/AAC.01143-06

10.1128/AAC.00736-08

10.1016/j.ijantimicag.2010.09.012

10.3201/eid1601.090852

10.1128/AAC.47.2.582-587.2003

10.1128/AAC.49.10.4423-4424.2005

Naas, 2006, VEB-1 extended-spectrum β-lactamase-producing Acinetobacter baumannii, France, Emerg Infect Dis, 12, 1214, 10.3201/eid1708.051547

10.1128/AAC.00438-06

10.1128/AAC.00987-08

10.1093/jac/dkn205

10.1093/jac/dkm464

10.1371/journal.pone.0007407

10.1126/science.288.5469.1251

10.1093/infdis/148.2.346

Oteo, 2010, AmpC beta-lactamases in Escherichia coli: emergence of CMY-2-producing virulent phylogroup D isolates belonging mainly to STs 57, 115, 354, 393, and 420, and phylogroup B2 isolates belonging to the international clone O25b-ST131, Diagn Microbiol Infect Dis, 67, 270, 10.1016/j.diagmicrobio.2010.02.008

Oteo, 2010, Extended-spectrum β-lactamase producing Escherichia coli: changing epidemiology and clinical impact, Curr Opin Infect Dis, 23, 320, 10.1097/QCO.0b013e3283398dc1

10.1016/j.ijantimicag.2009.03.006

Ozawa, 2010, Molecular typing of avian pathogenic Escherichia coli O78 strains in Japan by using multilocus sequence typing and pulsed-field gel electrophoresis, J Vet Med Sci, 72, 1517, 10.1292/jvms.10-0174

10.1016/j.ijantimicag.2010.07.018

10.1089/mdr.2009.0088

10.1128/AAC.00089-09

Peirano, 2010, Molecular epidemiology of Escherichia coli producing CTX-M β-lactamases: the worldwide emergence of clone ST131 O25:H4, Int J Antimicrob Ag, 35, 316, 10.1016/j.ijantimicag.2009.11.003

10.1093/jac/dkn484

Pellegrino, 2008, A carbapenem-susceptible Pseudomonas aeruginosa strain carrying the blaSPM gene, Diagn Micr Infec Dis, 61, 214, 10.1016/j.diagmicrobio.2008.01.005

10.1128/AAC.00163-08

10.1371/journal.pone.0007740

Pitt, 1989, Multiresistant serotype O 12 Pseudomonas aeruginosa: evidence for a common strain in Europe, Epidemiol Infect, 103, 565, 10.1017/S095026880003096X

10.1093/jac/26.3.319

10.1093/jac/dkq236

Poirel, 2006, Carbapenem resistance in Acinetobacter baumannii: mechanisms and epidemiology, Clin Microbiol Infec, 12, 826, 10.1111/j.1469-0691.2006.01456.x

10.1128/AAC.48.4.1406-1409.2004

10.1016/S1473-3099(10)70279-6

10.1128/AAC.00513-10

10.1093/jac/dkq428

10.1128/AAC.01247-10

10.1093/jac/dkp207

10.1093/jac/dkq190

10.1128/AAC.00267-07

10.1016/j.diagmicrobio.2010.01.010

10.1128/AAC.00899-09

Rogers, 2011, Escherichia coli O25b-ST131: a pandemic, multiresistant, community-associated strain, J Antimicrob Chemoth, 66, 1, 10.1093/jac/dkq415

10.1093/jac/dkp220

10.1111/j.1469-0691.2007.01825.x

10.1128/AAC.00785-08

10.1093/jac/dkp018

10.1128/AAC.00824-09

Schwarz, 2010, Editorial: assessing the antimicrobial susceptibility of bacteria obtained from animals, J Antimicrob Chemoth, 65, 601, 10.1093/jac/dkq037

10.1099/jmm.0.45620-0

Shevchenko OV Edelstein MV (2007) Epidemic population structure of MBL-producing Pseudomonas aeruginosa in Russia. Program and Abstracts of the 47th Interscience Conference on Antimicrobial Agents & Chemotherapy.

Smet, 2010, Characterization of extended-spectrum β-lactamases produced by Escherichia coli isolated from hospitalized and nonhospitalized patients: emergence of CTX-M-15-producing strains causing urinary tract infections, Microb Drug Resist, 16, 129, 10.1089/mdr.2009.0132

10.1093/jac/dkg124

10.1128/AAC.00762-09

10.1093/jac/dkn463

10.1128/JCM.43.12.5860-5864.2005

Teh, 2010, Multiple-locus variable-number tandem repeat analysis of Vibrio cholerae in comparison with pulsed field gel electrophoresis and virulotyping, J Biomed Biotechnol, 2010, 817190, 10.1155/2010/817190

Thomas CP Elamin N Doumith M et al. (2009) Hospital outbreak of Klebsiella pneumoniae producing OXA-48 carbapenemase in the United Kingdom. Proceedings of the 49th Interscience Conference on Antimicrobial Agents & Chemotherapy, American Society for Microbiology, San Francisco (abstract C2-648).

10.1128/JCM.00979-08

Toleman, 2002, Molecular characterization of SPM-1, a novel metallo-β-lactamase isolated in Latin America: report from the SENTRY antimicrobial surveillance programme, J Antimicrob Chemoth, 50, 673, 10.1093/jac/dkf210

10.1128/AAC.00816-09

Toth, 2010, Emergence of a colistin-resistant KPC-2-producing Klebsiella pneumoniae ST258 clone in Hungary, Eur J Clin Microbiol, 29, 765, 10.1007/s10096-010-0921-3

Tsakris, 2006, VIM-1 metallo-β-lactamase in Acinetobacter baumannii, Emerg Infect Dis, 12, 981, 10.3201/eid1206.051097

10.1093/jac/dkm138

10.1093/jac/dkm020

10.1111/j.1469-0691.2008.01996.x

10.1093/jac/dkn364

10.1111/j.1469-0691.2007.01759.x

Turton, 2009, Variable number tandem repeat loci providing discrimination within widespread genotypes of Acinetobacter baumannii, Eur J Clin Microbiol, 28, 499, 10.1007/s10096-008-0659-3

10.1128/AAC.01706-08

10.1111/j.1574-695X.2006.00173.x

10.1111/j.1469-0691.2007.01786.x

10.1128/AAC.00900-09

10.1128/AAC.00186-06

10.1128/AAC.01405-06

10.3201/eid1601.091118

10.1128/JCM.00702-07

10.1128/JCM.00459-09

10.1128/AAC.01053-06

10.1073/pnas.0609213104

Wirth, 2006, Sex and virulence in Escherichia coli: an evolutionary perspective, Mol Microbiol, 60, 1136, 10.1111/j.1365-2958.2006.05172.x

10.1093/jac/dkp185

Wolter, 2009, Surveillance of carbapenem-resistant Pseudomonas aeruginosa isolates from Puerto Rican medical center hospitals: dissemination of KPC and IMP-18 β-lactamases, Antimicrob Agents Ch, 53, 1660, 10.1128/AAC.01172-08

10.1128/AAC.48.12.4793-4799.2004

10.1093/jac/dkh424

10.1093/jac/dkl456

10.1093/jac/dkn396

10.1128/AAC.00688-09

10.1128/AAC.45.4.1151-1161.2001

10.1128/AAC.00774-09

Zarkotou, 2010, Risk factors and outcomes associated with acquisition of colistin-resistant KPC-producing Klebsiella pneumoniae: a matched case-control study, J Clin Microbiol, 48, 2271, 10.1128/JCM.02301-09

Zarrilli, 2009, Carbapenem resistance in Acinetobacter baumannii: the molecular epidemic features of an emerging problem in health care facilities, J Infect Dev Ctries, 3, 335, 10.3855/jidc.240

10.1093/jac/dki390

Zhang J Pike R Maharjan S et al. (2009) OXA-48 carbapenemase-producing Klebsiella pneumoniae in the UK. Proceedings and Abstracts of the 19th European Congress of Clinical Microbiology and Infectious Diseases, ESCMID, Helsinki (abstract P1696).

10.1093/jac/dkl541

10.1099/jmm.0.47576-0

10.1101/gr.4759706

Zioga, 2010, The ongoing challenge of acquired carbapenemases: a hospital outbreak of Klebsiella pneumoniae simultaneously producing VIM-1 and KPC-2, Int J Antimicrob Ag, 36, 190, 10.1016/j.ijantimicag.2010.04.002