Movement patterns of silvertip sharks (Carcharhinus albimarginatus) on coral reefs

Baayen RH, Davidson DJ, Bates DM (2008) Mixed-effects modeling with crossed random effects for subjects and items. J Mem Lang 59:390–412

Barnett A, Abrantes KG, Seymour J, Fitzpatrick R (2012) Residency and spatial use by reef sharks of an isolated seamount and its implications for conservation. PLoS One 7:e36574

Bates D, Maechler M, Bolker BM, Walker S (2014) lme4: Linear mixed-effects models using Eigen and S4. R package version 1.0-6. http://cran.r-project.org/package=lme4

Beaman RJ (2010) Project 3DGBR: A high-resolution depth model for the Great Barrier Reef and Coral Sea. In Marine and Tropical Sciences Research Facility (MTSRF)

Bond ME, Babcock E, Pikitch EK, Abercrombie DL, Lamb NF, Chapman DD (2012) Reef sharks exhibit site-fidelity and higher relative abundance in marine reserves on the Mesoamerican Barrier Reef. PLoS One 7:e32983

Bush A, Holland KN (2002) Food limitation in a nursery area: estimates of daily ration in juvenile scalloped hammerheads, Sphyrna lewini (Griffith and Smith, 1834) in Kane’ohe Bay, O’ahu, Hawai’i. J Exp Mar Bio Ecol 278:157–178

Carlson JK, Goldman KJ, Lowe CG (2004) Metabolism, Energetic Demand, and Endothermy. In: Carrier JC, Musick JA, Heithaus MR (eds) Biology of Sharks and Their Relatives. CRC Press, Boca Raton, pp 203–219

Chapman DD, Pikitch EK, Babcock E, Shivji MS (2005) Marine reserve design and evaluation using automated acoustic telemetry: a case-study involving coral reef-associated sharks in the Mesoamerican Caribbean. Mar Technol Soc J 39:42–55

Chatfield C (1996) The analysis of time series: an introduction. Chapman & Hall, Boca Raton, Florida

Chin A, Heupel MR, Simpfendorfer CA, Tobin AJ (2013) Ontogenetic movements of juvenile blacktip reef sharks: evidence of dispersal and connectivity between coastal habitats and coral reefs. Aquat Conserv Mar Freshw Ecosyst 23:468–474

Dale JJ, Stankus AM, Burns MS, Meyer CG (2011) The shark assemblage at French Frigate Shoals atoll, Hawai’i: species composition, abundance and habitat use. PLoS One 6:e16962

Daly R, Smale MJ, Cowley PD, Froneman PW (2014) Residency patterns and migration dynamics of adult bull sharks (Carcharhinus leucas) on the east coast of southern Africa. PLoS One 9:e109357

Done TJ (1982) Patterns in the distribution of coral communities across the central Great Barrier Reef. Coral Reefs 1:95–107

Dulvy NK, Fowler SL, Musick JA, Cavanagh RD, Kyne PM, Harrison LR, Carlson JK, Davidson LN, Fordham SV, Francis MP, Pollock CM, Simpfendorfer CA, Burgess GH, Carpenter KE, Compagno LJV, Ebert DA, Gibson C, Heupel MR, Livingstone SR, Sanciangco JC, Stevens JD, Valenti S, White WT (2014) Extinction risk and conservation of the world’s sharks and rays. eLIFE 3:e00590–e00590

Economakis AE, Lobel PS (1998) Aggregation behavior of the grey reef shark, Carcharhinus amblyrhynchos, at Johnston Atoll, Central Pacific Ocean. Environ Biol Fishes 51:129–139

Espinoza M, Farrugia TJ, Lowe CG (2011) Habitat use, movements and site fidelity of the gray smooth-hound shark (Mustelus californicus Gill 1863) in a newly restored southern California estuary. J Exp Mar Bio Ecol 401:63–74

Espinoza M, Heupel MR, Tobin AJ, Simpfendorfer CA (2015) Residency patterns and movements of grey reef sharks (Carcharhinus amblyrhynchos) in semi-isolated coral reef habitats. Mar. Biol. 162:343–358

Espinoza M, Cappo M, Heupel MR, Tobin AJ, Simpfendorfer CA (2014) Quantifying shark distribution patterns and species-habitat associations: implications of Marine Park Zoning. PLoS One 9:e106885

Farrugia TJ, Espinoza M, Lowe CG (2014) The fish community of a newly restored southern California estuary: ecological perspective 3 years after restoration. Environ Biol Fishes 97:1129–1147

Graham NAJ, Spalding MD, Sheppard CRC (2010) Reef shark declines in remote atolls highlight the need for multi-faceted conservation action. Aquat Conserv Mar Freshw Ecosyst 20:543–548

Grubbs RD (2010) Ontogenetic shifts in movement and habitat use. In: Carrier JC, Musick JA, Heithaus MR (eds) Sharks and their Relatives II. CRC Press, Boca Raton, Florida, pp 317–350

Hearn A, Ketchum J, Klimley AP, Espinoza E, Peñaherrera C (2010) Hotspots within hotspots? Hammerhead shark movements around Wolf Island, Galapagos Marine Reserve. Mar Biol 157:1899–1915

Heithaus MR, Frid A, Wirsing AJ, Worm B (2008) Predicting ecological consequences of marine top predator declines. Trends Ecol Evol 23:202–210

Heithaus MR, Alcoverro T, Arthur R, Burkholder DA, Coates KA, Christianen MJ, Kelkar N, Manuel SA, Wirsing AJ, Kenworthy WJ, Fourqurean JW (2014) Seagrasses in the age of sea turtle conservation and shark overfishing. Front Mar Sci 1:1–6

Heupel MR, Simpfendorfer CA (2002) Estimation of mortality of juvenile blacktip sharks, Carcharhinus limbatus, within a nursery area using telemetry data. Can J Fish Aquat Sci 59:624–632

Heupel MR, Simpfendorfer CA (2014) Importance of environmental and biological drivers in the presence and space use of a reef-associated shark. Mar Ecol Prog Ser 496:47–57

Heupel MR, Simpfendorfer CA, Fitzpatrick R (2010) Large-scale movement and reef fidelity of grey reef sharks. PLoS One 5:e9650

Heupel MR, Knip DM, Simpfendorfer CA, Dulvy NK (2014) Sizing up the ecological role of sharks as predators. Mar Ecol Prog Ser 495:291–298

Heupel MR, Simpfendorfer CA, Espinoza M, Smoothy AF, Tobin AJ, Peddemors VM (2015) Conservation challenges of sharks with continental scale migrations. Front Mar Sci 2:12

Heupel MR, Williams A, Welch D, Ballagh A, Mapstone B, Carlos G, Davies C, Simpfendorfer CA (2009) Effects of fishing on tropical reef associated shark populations on the Great Barrier Reef. Fish Res 95:350–361

Ketchum JT, Hearn A, Klimley AP, Peñaherrera C, Espinoza E, Bessudo S, Soler G, Arauz R (2014) Inter-island movements of scalloped hammerhead sharks (Sphyrna lewini) and seasonal connectivity in a marine protected area of the eastern tropical Pacific. Mar Biol 161:939–951

Last PR, Stevens JD (2009) Sharks and Rays of Australia. CSIRO Marine and Atmospheric Research, Victoria

McCauley DJ, Young HS, Dunbar RB, Estes JA, Semmens BX, Micheli F (2012) Assessing the effects of large mobile predators on ecosystem connectivity. Ecol Appl 22:1711–1717

McCauley DJ, DeSalles PA, Young HS, Papastamatiou YP, Caselle JE, Deakos MH, Gardner JP, Garton DW, Collen JD, Micheli F (2014) Reliance of mobile species on sensitive habitats: a case study of manta rays (Manta alfredi) and lagoons. Mar Biol 161:1987–1998

Meyer C, Holland K, Papastamatiou Y (2007a) Seasonal and diel movements of giant trevally Caranx ignobilis at remote Hawaiian atolls: implications for the design of Marine Protected Areas. Mar Ecol Prog Ser 333:13–25

Meyer CG, Papastamatiou YP, Holland KN (2007b) Seasonal, diel, and tidal movements of green jobfish (Aprion virescens, Lutjanidae) at remote Hawaiian atolls: implications for marine protected area design. Mar Biol 151:2133–2143

Meyer CG, Papastamatiou YP, Holland KN (2010) A multiple instrument approach to quantifying the movement patterns and habitat use of tiger (Galeocerdo cuvier) and Galapagos sharks (Carcharhinus galapagensis) at French Frigate Shoals. Hawaii. Mar Biol 157:1857–1868

Mourier J, Planes S (2013) Direct genetic evidence for reproductive philopatry and associated fine-scale migrations in female blacktip reef sharks (Carcharhinus melanopterus) in French Polynesia. Mol Ecol 22:201–214

Mourier J, Planes S, Buray N (2012) Trophic interactions at the top of the coral reef food chain. Coral Reefs 32:285

Nadon MO, Baum JK, Williams ID, Mcpherson JM, Zgliczynski BJ, Richards BL, Schroeder RE, Brainard RE (2012) Re-creating missing population baselines for Pacific reef sharks. Conserv Biol 26:493–503

Papastamatiou YP, Lowe CG, Caselle JE, Friedlander AM (2009) Scale-dependent effects of habitat on movements and path structure of reef sharks at a predator-dominated atoll. Ecology 90:996–1008

Papastamatiou YP, Friedlander AM, Caselle JE, Lowe CG (2010) Long-term movement patterns and trophic ecology of blacktip reef sharks (Carcharhinus melanopterus) at Palmyra Atoll. J Exp Mar Bio Ecol 386:94–102

Papastamatiou YP, Meyer CG, Carvalho F, Dale JJ, Hutchinson MR, Holland KN (2013) Telemetry and random-walk models reveal complex patterns of partial migration in a large marine predator. Ecology 94:2595–2606

Quattro JM, Stoner DS, Driggers WB, Anderson CA, Priede KA, Hoppmann EC, Campbell NH, Duncan KM, Grady JM (2005) Genetic evidence of cryptic speciation within hammerhead sharks (Genus Sphyrna). Mar Biol 148:1143–1155

R Development Core Team (2014) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/

Rizzari JR, Bergseth BJ, Frisch AJ (2014a) Impact of conservation areas on trophic interactions between apex predators and herbivores on coral reefs. Conserv Biol 29:418–429

Rizzari JR, Frisch AJ, Magnenat KA (2014b) Diversity, abundance, and distribution of reef sharks on outer-shelf reefs of the Great Barrier Reef, Australia. Mar Biol 161:2847–2855

Ruppert JLW, Travers MJ, Smith LL, Fortin M-J, Meekan MG (2013) Caught in the middle: combined impacts of shark removal and coral loss on the fish communities of coral reefs. PLoS One 8:e74648

Sandin SA, Smith JE, Demartini EE, Dinsdale EA, Donner SD, Friedlander AM, Konotchick T, Malay M, Maragos JE, Obura D, Pantos O, Paulay G, Richie M, Rohwer F, Schroeder RE, Walsh S, Jackson JBC, Knowlton N, Sala E (2008) Baselines and degradation of coral reefs in the Northern Line Islands. PLoS One 3:e1548

Simpfendorfer CA, Heupel MR, Hueter RE (2002) Estimation of short-term centers of activity from an array of omnidirectional hydrophones and its use in studying animal movements. Can J Fish Aquat Sci 59:23–32

Simpfendorfer CA, Heupel MR, Collins AB (2008) Variation in the performance of acoustic receivers and its implication for positioning algorithms in a riverine setting. Can J Fish Aquat Sci 65:482–492

Sims DW, Wearmouth VJ, Southall EJ, Hill JM, Moore P, Rawlinson K, Hutchinson N, Budd GC, Righton D, Metcalfe JD, Nash JP, Morritt D (2006) Hunt warm, rest cool: bioenergetic strategy underlying diel vertical migration of a benthic shark. J Anim Ecol 75:176–190

Speed CW, Meekan MG, Field IC, McMahon CR, Bradshaw CJ (2012) Heat-seeking sharks: support for behavioural thermoregulation in reef sharks. Mar Ecol Prog Ser 463:231–245

Speed CW, Meekan MG, Field IC, McMahon CR, Stevens JD, McGregor F, Huveneers C, Berger Y, Bradshaw CJA (2011) Spatial and temporal movement patterns of a multi-species coastal reef shark aggregation. Mar Ecol Prog Ser 429:261–275

Stevens JD, Bonfil R, Dulvy NK, Walker PA (2000) The effects of fishing on sharks, rays, and chimaeras (chondrichthyans), and the implications for marine ecosystems. ICES J Mar Sci 57:476–494

Vianna GM, Meekan MG, Meeuwig JJ, Speed CW (2013) Environmental influences on patterns of vertical movement and site fidelity of grey Reef Sharks (Carcharhinus amblyrhynchos) at Aggregation Sites. PLoS One 8:e60331

Welsh JQ, Fox RJ, Webber DM, Bellwood DR (2012) Performance of remote acoustic receivers within a coral reef habitat: implications for array design. Coral Reefs 31:693–702

Werry JM, Planes S, Berumen ML, Lee KA, Braun CD, Clua E (2014) Reef-fidelity and migration of tiger sharks, Galeocerdo cuvier, across the Coral Sea. PLoS One 9:e83249

Whitney NM, Pyle RL, Holland KN, Barcz JT (2012) Movements, reproductive seasonality, and fisheries interactions in the whitetip reef shark (Triaenodon obesus) from community-contributed photographs. Environ Biol Fishes 93:121–136

Zuur AF, Ieno EN, Walker N, Saveliev AA, Smith GM (2009) Mixed Effects Models and Extensions in Ecology with R. Springer, New York, NY