Morphological, molecular and toxigenic characteristics of Namibian Pseudo-nitzschia species – including Pseudo-nitzschia bucculenta sp. nov.

Harmful Algae - Tập 76 - Trang 80-95 - 2018
Frederik Frøsig Gai1, Cecilie Kirketerp Hedemand1, Deon C. Louw2, Kolette Grobler3, Bernd Krock4, Øjvind Moestrup5, Nina Lundholm1
1Natural History Museum of Denmark, University of Copenhagen, Sølvgade 83S, 1307, Copenhagen K, Denmark
2Ministry of Fisheries and Marine ‬Resources, National Marine Information and Research Centre (NatMIRC), Swakopmund, P.O. Box 912, Namibia
3Ministry of Fisheries and Marine ‬Resources, National Marine Information and Research Centre (NatMIRC), Lüderitz, PO Box 394, Shark Island, Namibia
4Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
5Marine Biological Section, University of Copenhagen, Universitetsparken 4, 2100, Copenhagen Ø, Denmark

Tài liệu tham khảo

Amato, 2007, Reproductive isolation among sympatric cryptic species in marine diatoms, Protist, 158, 193, 10.1016/j.protis.2006.10.001 Bakun, 1996, 323 Bates, 1989, Pennate diatom Nitzschia pungens as the primary source of domoic acid, a toxin in shellfish from eastern Prince Edward Island, Canada, Can. J. Fish. Aquat. Sci., 46, 1203, 10.1139/f89-156 Bates, S.S., Hubbard, K.A., Lundholm, N., Montresor, M., Leaw, C.P., Pseudo-nitzschia, Nitzschia, and domoic acid: new research since 2011. Harmful Algae (in revision). Baugh, 2006, Estimates of specific toxicity in several Pseudo-nitzschia species from the Washington coast, based on culture and field studies, Afr. J. Mar. Sci., 28, 403, 10.2989/18142320609504187 Blanco, 2010, Amnesic shellfish poisoning (ASP) toxins in plankton and molluscs from Luanda Bay, Angola, Toxicon, 55, 541, 10.1016/j.toxicon.2009.10.008 Busse, 2006, Domoic acid in phytoplankton and fish in San Diego CA, USA Harmful Algae, 5, 91, 10.1016/j.hal.2005.06.005 Churro, 2009, Diversity and abundance of potentially toxic Pseudo-nitzschia Peragallo in Aveiro coastal lagoon Portugal and description of a new variety, P. pungens var. aveirensis var. nov., Diatom Res., 24, 35, 10.1080/0269249X.2009.9705782 Fawcett, 2007, Contrasting wind patterns and toxigenic phytoplankton in the southern Benguela upwelling system, Mar. Ecol. Prog. Ser., 348, 19, 10.3354/meps07027 Fernandes, 2014, Diversity and toxicity of the diatom Pseudo-nitzschia Peragallo in the Gulf of Maine, Northwestern Atlantic Ocean, Deep Sea Res. Part II, 103, 139, 10.1016/j.dsr2.2013.06.022 Florenchie, 2003, The source of benguela Niños in the south Atlantic Ocean, Geophys. Res. Lett., 30, 1505, 10.1029/2003GL017172 Fritz, 1992, An outbreak of domoic acid poisoning attributed to the pennate diatom Pseudo-nitzschia australis, J. Phycol., 28, 439, 10.1111/j.0022-3646.1992.00439.x Guannel, 2015, Toxigenicity and biogeography of the diatom Pseudo-nitzschia across distinct environmental regimes in the South Atlantic Ocean, Mar. Ecol. Prog. Ser., 526, 67, 10.3354/meps11027 Guillard, 1993, Stichochrysis immobilis is a diatom, not a chrysophyte, Phycologia, 32, 234, 10.2216/i0031-8884-32-3-234.1 Hall, 1999, BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucleic Acids Symp. Ser., 41, 95 Hansen, 2014, Succession of micro- and nanoplankton groups in ageing upwelled waters off Namibia, J. Mar. Syst., 140, 130, 10.1016/j.jmarsys.2014.05.003 Harðardóttir, 2015, Dangerous relations in the arctic marine food web: interactions between toxin producing Pseudo-nitzschia diatoms and Calanus copepodites, Mar. Drugs, 13, 3809, 10.3390/md13063809 Hart, 1960 Hasle, G.R., 1993. Nomenclatural notes on marine planktonic diatoms. The family Bacillariaceae. In: Sims, P.A. (Ed.), Progress in diatom studies, Contributions to taxonomy, ecology and nomenclature. Special volume in honour of Robert Ross on the occasion of his 80th Birthday. Beihefte zur Nova Hedwigia 106, 315-321. Hasle, 1996, A review of Pseudo-nitzschia, with special reference to the Skagerrak, North Atlantic, and adjacent waters, Helgoländer Meeresuntersuchungen, 50, 131, 10.1007/BF02367149 Hasle, 1965, Nitzschia and Fragilariopsiss pecies studied in the light and electron microscopes: II. The group Pseudonitzschia. Skr. Norske Vidensk-Akad. I, Mat.-Nat. Kl. Ny Serie, 18, 1 Hasle, 2002, Are most of the domoic acid-producing species of the diatom genus Pseudo-nitzschia cosmopolites?, Harmful Algae, 1, 137, 10.1016/S1568-9883(02)00014-8 Hubbart, 2012, Toxigenic phytoplankton and concomitant toxicity in the mussel Choromytilus meridionalis off the west coast of South Africa, Harmful Algae, 20, 30, 10.1016/j.hal.2012.07.005 Hutchings, 2009, The Benguela current: an ecosystem of four components, Prog. Oceanogr., 83, 15, 10.1016/j.pocean.2009.07.046 Krock, 2008, LC-MS–MS aboard ship: tandem mass spectrometry in the search for phycotoxins and novel toxigenic plankton from the North Sea, Anal. Bioanal. Chem., 392, 797, 10.1007/s00216-008-2221-7 Lachkar, 2012, A comparative study of biological production in eastern boundary upwelling systems using an artificial neural network, Biogeosciences, 9, 293, 10.5194/bg-9-293-2012 Lefebvre, 2016, Prevalence of algal toxins in Alaskan marine mammals foraging in a changing arctic and subarctic environment, Harmful Algae, 55, 13, 10.1016/j.hal.2016.01.007 Lelong, 2012, Pseudo-nitzschia (Bacillariophyceae) species, domoic acid and amnesic shellfish poisoning: revisiting previous paradigms, Phycologia, 51, 168, 10.2216/11-37.1 Li, 2017, Pseudo-nitzschia simulans sp. nov. (Bacillariophyceae), the first domoic acid producer from Chinese waters, Harmful Algae, 67, 119, 10.1016/j.hal.2017.06.008 Lim, 2014, Genetic structure of Pseudo-nitzschia pungens (Bacillariophyceae) populations: implications of a global diversification of the diatom, Harmful Algae, 37, 142, 10.1016/j.hal.2014.06.004 Louw, 2016, Seasonal and interannual phytoplankton dynamics and forcing mechanisms in the Northern Benguela upwelling system, J. Mar. Syst., 157, 124, 10.1016/j.jmarsys.2016.01.009 Louw, 2017, Annual patterns, distribution and long-term trends of Pseudo-nitzschia species in the northern Benguela upwelling system, J. Plankton Res., 39, 35, 10.1093/plankt/fbw079 Louw, 2018, Morphology and toxicity of Pseudo-nitzschia species in the northern Benguela Upwelling System, Harmful Algae, 75, 118, 10.1016/j.hal.2018.04.008 Lundholm, 2002, Phylogeny of the Bacillariaceae with emphasis on the genus Pseudo-nitzschia (Bacillariophyceae) based on partial LSU rDNA, Eur. J. Phycol., 37, 115, 10.1017/S096702620100347X Lundholm, 2006, Inter-and intraspecific variation of the Pseudo-nitzschia delicatissima complex (Bacillariophyceae) illustrated by rRNA probes, morphological data and phylogenetic analyses, J. Phycol., 42, 464, 10.1111/j.1529-8817.2006.00211.x Lundholm, 2012, Cryptic and pseudo-cryptic diversity in diatoms—with descriptions of Pseudo-nitzschia hasleana sp. nov. and P. fryxelliana sp. nov, J. Phycol., 48, 436, 10.1111/j.1529-8817.2012.01132.x Lundholm, 2018 Mai, 1997, The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants, J. Mol. Evol., 44, 258, 10.1007/PL00006143 Malviya, 2016, Insights into global diatom distribution and diversity in the world’s ocean, Proc. Natl. Acad. Sci., 113, 1516, 10.1073/pnas.1509523113 Marangoni, 2001, Pseudo-nitzschia australis Frenguelli from Lambert’s Bay, South Africa, Proc. Microsc. Soc. S. Afr., 31, 53 McCabe, 2016, An unprecedented coastwide toxic algal bloom linked to anomalous ocean conditions, Geophys. Res. Lett., 43, 366, 10.1002/2016GL070023 Meeuwis, 1990, Surface thermal characteristics of the Angola-Benguela front, S. Afr. J. Mar. Sci., 9, 261, 10.2989/025776190784378772 Mohrholz, 2008, The seasonal variability of the northern Benguela undercurrent and its relation to the oxygen budget on the shelf, Cont. Shelf Res., 28, 424, 10.1016/j.csr.2007.10.001 Nash, 2017, Domoic acid poisoning as a possible cause of seasonal cetacean mass stranding events in Tasmania, Aust. Bull. Environ. Contam. Toxicol., 98, 8, 10.1007/s00128-016-1906-4 Orive, 2013, The genus Pseudo-nitzschia (Bacillariophyceae) in a temperate estuary with description of two new species: Pseudo-nitzschia plurisecta sp. nov. and Pseudo-nitzschia abrensis sp. nov, J. Phycol., 49, 1192, 10.1111/jpy.12130 Posada, 1998, Modeltest: testing the model of DNA substitution, Bioinformatics, 14, 817, 10.1093/bioinformatics/14.9.817 Rae, 2005, A demonstration of the hydrographic partition of the Benguela upwelling ecosystem at 26 40'S, Afr. J. Mar. Sci., 27, 617, 10.2989/18142320509504122 Ronquist, 2003, MrBayes 3: Bayesian phylogenetic inference under mixed models, Bioinformatics, 19, 1572, 10.1093/bioinformatics/btg180 Rouault, 2017, Origin, development and demise of the 2010–2011 Benguela Niño, J. Mar. Syst. Seeyave, 2009, Nitrogen nutrition in assemblages dominated by Pseudo-nitzschia spp., Alexandrium catenella and Dinophysis acuminata off the west coast of South Africa, Mar. Ecol. Prog. Ser., 379, 91, 10.3354/meps07898 Shannon, 1986, On the existence of an El Niño-type phenomenon in the Benguela system, J. Mar. Res., 44, 495, 10.1357/002224086788403105 Shannon, 1987, Large-and mesoscale features of the Angola-Benguela front, South African Journal of Marine Science, 5, 11, 10.2989/025776187784522261 Swofford, 2002 Tammilehto, 2015, Induction of domoic acid production in the toxic diatom Pseudo-nitzschia seriata by calanoid copepods, Aquat. Toxicol., 159, 52, 10.1016/j.aquatox.2014.11.026 Teitelbaum, 1990, Neurologic sequelae after ingestion of mussels contaminated with domoic acid, N. Engl. J. Med., 323, 1632 Teng, 2015, A non-toxigenic but morphologically and phylogenetically distinct new species of Pseudo-nitzschia, Pseudo-nitzschia sabit sp. nov. (Bacillariophyceae), J. Phycol., 51, 706, 10.1111/jpy.12313 Thessen, 2009, Intra-and interspecies differences in growth and toxicity of Pseudo-nitzschia while using different nitrogen sources, Harmful Algae, 8, 792, 10.1016/j.hal.2009.01.003 Thompson, 1994, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673 Trainer, 2012, Pseudo-nitzschia physiological ecology, phylogeny, toxicity, monitoring and impacts on ecosystem health, Harmful Algae, 14, 271, 10.1016/j.hal.2011.10.025 Villac, 1998, Pseudo-nitzschia pungens var. cingulata var. nov. (Bacillariophyceae) based on field and culture observations, Phycologia, 37, 269, 10.2216/i0031-8884-37-4-269.1 Wang, 2012, Morphology, phylogeny and ITS-2 secondary structure of Pseudo-nitzschia brasiliana (Bacillariophyceae), including Chinese strains, Phycologia, 51, 1, 10.2216/09-108.1 White, 1990, Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, PCR Protoc., 18, 315 Zuker, 2003, Mfold web server for nucleic acid folding and hybridization prediction, Nucleic Acids Res., 31, 3406, 10.1093/nar/gkg595