Molecular systematics of the Coronophorales and new species of Bertia, Lasiobertia and Nitschkia

Mycological Research - Tập 108 - Trang 1384-1398 - 2004
Sabine M. Huhndorf1, Andrew N. Miller1, Fernando A. Fernández1
1The Field Museum of Natural History, Botany Department, Chicago, Illinois 60605-2496, USA.

Tài liệu tham khảo

von Arx, 1981, On Monilla sitophila and some families of ascomycetes, Sydowia, 34, 13 von Arx, 1954, Die Gattungen der amerosporen Pyrenomyceten, Beiträge zur Kryptogamenflora der Schweiz, 11, 1 Barr, 1990, Prodromus to nonlichenized, pyrenomycetous members of class Hymenoascomycetes, Mycotaxon, 39, 43 Carroll, 1964, Studies on lignicolous Sordariaceae, Mycologia, 56, 77, 10.2307/3756400 Corlett, 1984, Bertia moriformis and its varieties, Canadian Journal of Botany, 62, 2561, 10.1139/b84-348 Eriksson, 1984, Outline of the ascomycetes- 1984, Systema Ascomycetum, 3, 1 Eriksson, 1998, Outline of the ascomycetes- 1998, Systema Ascomycetum, 16, 83 Eriksson, 2001, Outline of Ascomycota — 2001, Myconet, 7, 1 Eriksson, 2003, Outline of Ascomycota — 2003, Myconet, 9, 1 Felsenstein, 1978, Cases in which parsimony or compatibility methods will be positively misleading, Systematic Zoology, 27, 401, 10.2307/2412923 Felsenstein, 1985, Confidence intervals on phylogenies: an approach using the bootstrap, Evolution, 39, 783, 10.2307/2408678 Fitzpatrick, H. M. (1923a) Monograph of the Nitschkieae. Mycologia 15: 1–44. Fitzpatrick, H. M. (1923b) Monograph of the Nitschkieae. Mycologia 15: 45–67. Fitzpatrick, 1924, The genus Fracchiaea, Mycologia, 16, 101, 10.2307/3753316 Hawksworth, 1995 von Höhnel, 1907, Fragmente zur Mykologie.(4 Mitteilung, nr 156–168, Akademie der Wissenschaften in Wien. Sitzungsberichte, Mathematisch-naturwissenschaftliche Klasse, Abteilung 1, 116, 615 Hsieh, 1995, Taiwan fungi: new species and new records of ascomycetes, Mycological Research, 99, 917, 10.1016/S0953-7562(09)80750-8 Huelsenbeck, 1995, Performance of phylogenetic methods in simulation, Systematic Biology, 44, 17, 10.1093/sysbio/44.1.17 Huelsenbeck, 1997, Is the Felsenstein zone a fly trap?, Systematic Biology, 46, 69, 10.1093/sysbio/46.1.69 Huelsenbeck, 2001, MRBAYES: Bayesian inference of phylogenetic trees, Biometrics, 17, 754 Huhndorf, 1991, A method of sectioning ascomycete herbarium specimens for light microscopy, Mycologia, 83, 520, 10.2307/3760366 Huhndorf, 1998, Neotropical ascomycetes 7. Caudatispora biapiculatis sp. nov. from Puerto Rico, Sydowia, 50, 200 Huhndorf, 2004, Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae redefined, Mycologia, 96, 368, 10.2307/3762068 Hyde, 1993, Fungi from palms. VI. Reflections on Oxydothis and related genera, Sydowia, 45, 204 Hyde, 1995, Tropical Australian freshwater fungi. VIII. Bertia convolutispora sp. nov, Nova Hedwigia, 61, 141 Krug, 1988, A new species of Bertia from China, Canadian Journal of Botany, 66, 1256, 10.1139/b88-179 Lundqvist, 1972, Nordic Sordariaceae s. lat, Symbolae Botanicae Upsalienses, 20, 1 Luttrell, 1951, Taxonomy of the pyrenomycetes, University of Missouri Studies, 24, 1 Luttrell, 1955, The ascostromatic ascomycetes, Mycologia, 47, 511, 10.2307/3755666 Lutzoni, 2000, Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology, Systematic Biology, 49, 628, 10.1080/106351500750049743 Miller, 2004, A natural classification of Lasiosphaeria based on nuclear LSU rDNA sequences, Mycological Research, 108, 26, 10.1017/S0953756203008864 Miller, 1949, A revision of the classification of the ascomycetes with special emphasis on the pyrenomycetes, Mycologia, 41, 99, 10.2307/3755160 Müller, 1973, Pyrenomycetes: Meliolales, Coronophorales, Sphaeriales, 4A, 87 Müller, 1972, Generic position of Sphaeria phaeostroma, Transactions of the British Mycological Society, 58, 73, 10.1016/S0007-1536(72)80073-1 Nannfeldt, 1932, Studien über die Morphologie und Systematik der nicht-lichenisierten inoperculaten Discomyceten, Nova Acta Regiae Societatis Scientiarum Upsaliensis, ser. 4, 8, 1 Nannfeldt, 1975, Stray studies in the Coronophorales (Pyrenomycetes) 1–3, Svensk Botanisk Tidskrift, 69, 49 Nannfeldt, 1975, Stray studies in the Coronophorales (Pyrenomycetes) 4–8, Svensk Botanisk Tidskrift, 69, 289 Posada, 1998, Modeltest: testing the model of DNA substitution, Bioinformatics, 49, 817, 10.1093/bioinformatics/14.9.817 Réblová, 1999, Studies in Chaetosphaeria sensu lato I. The genera Chaetosphaerella and Tengiomyces gen. nov. of the Helminthosphaeriaceae, Mycotaxon, 70, 387 Réblová, 1999, Studies in Chaetosphaeria sensu lato II. Coniobrevicolla gen. & sp. nov, Mycotaxon, 70, 421 Réblová, 1999, Studies in Chaetosphaeria sensu lato III. Umbrinosphaeria gen. nov. and Miyoshiella with Sporodesmium anamorphs, Mycotaxon, 71, 13 Réblová, 1999, Studies in Chaetosphaeria sensu lato IV. Crassochaeta gen. nov., a new lignicolous genus of the Trichosphaeriaceae, Mycotaxon, 71, 45 Robinson, 1998, Sensitivity of the relative-rate test to taxonomic sampling, Molecular Biology & Evolution, 15, 1091, 10.1093/oxfordjournals.molbev.a026016 Robinson-Rechavi, 2000, RRTree: Relative-Rate Tests between groups of sequences on a phylogenetic tree, Bioinformatics, 16, 296, 10.1093/bioinformatics/16.3.296 Saccardo, 1882, Vol. 1 Saccardo, 1885, Miscellanea mycologica ser II, Atti del Reale Istituto Veneto di Scienze, Lettere ed Arti, serie 3, 43, 711 Sivanesan, 1976, New British species of Rhamphoria, Trematosphaeria and Chaetosphaerella, Transactions of the British Mycological Society, 67, 469, 10.1016/S0007-1536(76)80174-X Sivanesan, 1978, Lasiobertia africana gen. et sp. nov. and a new variety of Bertia moriformis, Transactions of the British Mycological Society, 70, 383, 10.1016/S0007-1536(78)80136-3 Smyk, 1981, Fungi of the order Coronophorales in the Ukraine mycoflora, Ukrainskii Botanichnii Zhurnal, 38, 46 Subramanian, C. V. & Sekar, G. (1990) Coronophorales from India — a monograph. Kavaka 18: 19–90. Swofford, 2002 Tamura, 1993, Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees, Molecular Biology and Evolution, 10, 512 Teng, 1938, Additional fungi from China VIII, Sinensia, 9, 219 Vujanovic, 2002, A new variety of Nitschkia parasitans hyperparasitic on Nectria cinnabarina from American beech, Mycotaxon, 82, 121 Yuan, 1997, New species and new records of ascomycetes on stems of eucalypts from Tasmania, Australia, Mycotaxon, 63, 9