Molecular identification and antimicrobial activities of some wild Egyptian mushrooms: Bjerkandera adusta as a promising source of bioactive antimicrobial phenolic compounds

Das K (2010) Diversity and conservation of wild mushrooms in Sikkim with special reference to Barsey Rhododendron Sanctuary. NeBIO 1:1–13 Rashid S, Aminuzzaman F, Islam M, Rahaman M, Rumainul M (2016) Biodiversity and distribution of wild mushrooms in the Southern Region of Bangladesh. J Adv Biol Biotechnol 9(1):1–25. https://doi.org/10.9734/jabb/2016/27711 Gebreyohannes G, Nyerere A, Bii C, Berhe SD (2019) Determination of antimicrobial activity of extracts of indigenous wild mushrooms against pathogenic organisms. Evid Based Compl Altern Med 2019:1–7. https://doi.org/10.1155/2019/6212673 González-Palma I, Escalona-Buendía HB, Ponce-Alquicira E, Téllez-Téllez M, Gupta VK, Díaz-Godínez G, Soriano-Santos J (2016) Evaluation of the antioxidant activity of aqueous and methanol extracts of Pleurotus ostreatus in different growth stages. Front Microbiol 7:1–9. https://doi.org/10.3389/fmicb.2016.01099 Temesgen T (2018) Application of mushroom as food and medicine. Adv Biotechnol Microbiol 11(4). https://doi.org/10.19080/aibm.2018.11.555817 Sevindik M (2018) Investigation of antioxidant/oxidant status and antimicrobial activities of Lentinus tigrinus. Adv Pharmacol Sci 2018:1–4. https://doi.org/10.1155/2018/1718025 Duru ME, Çayan GT (2015) Biologically active terpenoids from mushroom origin: a review. Rec Nat Prod 9:456–483 Vamanu E, Pelinescu D, Avram I (2018) Antioxidative Effects of Phenolic Compounds of mushroom mycelia in simulated regions of the human colon, in vitro study. Polish J Food Nutr Sci 68(1):83–90. https://doi.org/10.1515/pjfns-2017-0010 Golak-Siwulska I, Kałuzewicz A, Spizewski T, Siwulski M, Sobieralski K (2018) Bioactive compounds and medicinal properties of Oyster mushrooms (Pleurotus sp.). Folia Hortic 30(2):191–201. https://doi.org/10.2478/fhort-2018-0012 Yang R-H, Su J-H, Shang J-J, Wu Y-Y, Li Y, Bao D-P, Yao YJ (2018) Evaluation of the ribosomal DNA internal transcribed spacer (ITS), specifically ITS1 and ITS2, for the analysis of fungal diversity by deep sequencing. PLoS One 13(10):e0206428. https://doi.org/10.1371/journal.pone.0206428 Adeniyi M, Titilawo Y, Oluduro A, Odeyemi O, Nakin M, Okoh AI (2018) Molecular identification of some wild Nigerian mushrooms using internal transcribed spacer: polymerase chain reaction. AMB Express 8(1):148. https://doi.org/10.1186/s13568-018-0661-9 Raja HA, Baker TR, Little JG, Oberlies NH (2017) DNA barcoding for identification of consumer-relevant mushrooms: a partial solution for product certification? Food Chem 214:383–392. https://doi.org/10.1016/j.foodchem.2016.07.052 Ozen T, Darcan C, Aktop OTI (2011) Screening of antioxidant, antimicrobial activities and chemical contents of edible mushrooms wildly grown in the black sea region of Turkey. Comb Chem High Throughput Screen 14(2):72–84. https://doi.org/10.2174/138620711794474079 Lou Z, Wang H, Rao S, Sun J (2012) ma Chaoyang JL. p-Coumaric acid kills bacteria through dual damage mechanisms. Food Control 25(2):550–554. https://doi.org/10.1016/j.foodcont.2011.11.022 Alves MJ, Ferreira ICFR, Froufe HJC, Abreu RMV, Martins A, Pintado M (2013) Antimicrobial activity of phenolic compounds identified in wild mushrooms, SAR analysis and docking studies. J Appl Microbiol 115(2):346–357. https://doi.org/10.1111/jam.12196 Kim M-Y, Seguin P, Ahn J-K, Kim J-J, Chun S-C, Kim E-H, Seo S-H, Kang E-Y, Kim S-L, Park Y-J, Ro H-M, Chung I-M (2008) Phenolic compound concentration and antioxidant activities of edible and medicinal mushrooms from Korea. J Agric Food Chem 56(16):7265–7270. https://doi.org/10.1021/jf8008553 Largent DL, Stuntz DE (1986) How to identify mushrooms to genus I: macroscopic features. Revised ed. Mad River Press Das SK (2013) Morphological, biochemical and molecular characterization of some wild edible mushroom of Eastern Chotonagpur part of West Bengal. University of Kalyani, West Bengal, India Vejlupkova Z, Fowler J (2003) Maize DNA preps for undergraduate students a robust method for PCR genotyping. MNL 77:24–25 Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, Thierer T, Ashton B, Meintjes P, Drummond A (2012) Geneious basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28(12):1647–1649. https://doi.org/10.1093/bioinformatics/bts199 Lin CH, Chang CY, Lee KR, Lin HJ, Lin WC, Chen TH, Wan L (2016) Cold-water extracts of Grifola frondosa and its purified active fraction inhibit hepatocellular carcinoma in vitro and in vivo. Exp Biol Med 241(13):1374–1385. https://doi.org/10.1177/1535370216640149 Balouiri M, Sadiki M, Ibnsouda SK (2016) Methods for in vitro evaluating antimicrobial activity: a review. J Pharm Anal 6(2):71–79. https://doi.org/10.1016/j.jpha.2015.11.005 Umbreit WW, Burris R, Stauffer JF (1964) Monometric technique, a manual describing methods applicable to the study of tissue metabolism, 4th edn, Burgess, Minneapolis Lowry O, Rosebrough N, Farr A, Randall R (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193(1):265–275. https://doi.org/10.1016/S0021-9258(19)52451-6 Kujala TS, Loponen JM, Klika K, Pihlaja K (2000) Phenolics and betacyanins in red beetroot (Beta vulgaris) root: distribution and effect of cold storage on the content of total phenolics and three individual compounds. J Agric Food Chem 48:5338–5342. https://doi.org/10.1021/jf000523q Roberts CE, Raner GM, Isaacs GD (2018) High performance liquid chromatography separation of epigenetic cytosine variants. Methods Protoc 1(2):1–8. https://doi.org/10.3390/mps1020010 Barros L, Cruz T, Baptista P, Estevinho LM, Ferreira ICFR (2008) Wild and commercial mushrooms as source of nutrients and nutraceuticals. Food Chem Toxicol 46(8):2742–2747. https://doi.org/10.1016/j.fct.2008.04.030 Vizzini A, Angelini C, Ercole E (2014) Le sezioni Velatae e Aporus di Agrocybe sottogenere Aporus: rivalutazione del genere Cyclocybe Velen. ed una nuova specie. Boll Assoc Micol Ecol Rom 30:21–38 Niveiro N, Uhart M, Albertó E (2020) Revision of the genera Agrocybe and Cyclocybe (Strophariaceae, Agaricales, Basidiomycota) in Argentina. Rodriguésia 71:1–26. https://doi.org/10.1590/2175-7860202071038 Ndyetabura T, Lyantagaye SL, Mshandete AM (2010) Antimicrobial activity of ethyl acetate extracts from edible Tanzanian Coprinus cinereus (Schaeff ) S . Grays . lat . cultivated on grasses supplemented with cow dung manure. ARPN J Agric Biol Sci 5:79–85 Hibbett DS, Bauer R, Binder M, Giachini AJ, Hosaka K, Justo A, et al. Agaricomycetes. In: McLaughlin DJ SJ, editor. mycota , Syst. Evol. part A, vol. 6. 2nd edn., Berlin, Germany: Springer-Verlag, 373–429.; 2014, p. 57. Binder M, Hibbett DS, Larsson K-H, Larsson E, Langer E, Langer G (2005) The phylogenetic distribution of resupinate forms across the major clades of mushroom-forming fungi (Homobasidiomycetes). Syst Biodivers 3(2):113–157. https://doi.org/10.1017/S1477200005001623 Nikolovska-Nedelkoska D, Atanasova-Pancevska N, Amedi H, Veleska D, Ivanova E, Karadelev M, Kungulovski D (2013) Screening of antibacterial and antifungal activities of selected Macedonian wild mushrooms. Zb Matice Srp Za Prir Nauk Srp J Nat Sci (124):333–340. https://doi.org/10.2298/zmspn1324333n Barneche S, Jorcin G, Cecchetto G, Cerdeiras M, Vázquez A, Alborés S (2016) Screening for antimicrobial activity of wood rotting higher basidiomycetes mushrooms from Uruguay against phytopathogens. Int J Med Mushrooms 18(3):261–267. https://doi.org/10.1615/IntJMedMushrooms.v18.i3.90 Chikwem J, Jonathan GS, Group AM, Hull A (2020) Antimicrobial potential of Trichaptum biforme and Bjerkandera adusta from Pennsylvania, USA. J Nat Sci Res. https://doi.org/10.7176/jnsr/11-16-01 Kumar SS, Shankar S, Mohan SC (2016) In vitro antioxidant and antimicrobial activity of polysaccharides extracted from edible mushrooms Pleurotus florida and Agrocybe cylindracea. Singapore J Chem Biol 6(1):17–22. https://doi.org/10.3923/sjchbio.2017.17.22 Nascimento GGF, Locatelli J, Freitas PC, Silva GL (2000) Antibacterial activity of plant extracts and phytochemicals on antibiotic-resistant bacteria. Braz J Microbiol 31(4):247–256. https://doi.org/10.1590/S1517-83822000000400003 Stojanova M, Pantić M, Karadelev M, Čuleva B, Nikšić M (2020) Antioxidant potential of extracts of three mushroom species collected from the Republic of North Macedonia. J Food Process Preserv 45(2):1–10. https://doi.org/10.1111/jfpp.15155 Lou Z, Wang H, Zhu S, Ma C, Wang Z (2011) Antibacterial activity and mechanism of action of chlorogenic acid. J Food Sci 76(6):M398–M403. https://doi.org/10.1111/j.1750-3841.2011.02213.x Arakawa H, Maeda M, Okubo S, Shimamura T (2004) Role of hydrogen peroxide in bactericidal action of catechin. Biol Pharm Bull 27(3):277–281. https://doi.org/10.1248/bpb.27.277 Samad MA, Hashim SH, Simarani K, Yaacob JS (2016) Antibacterial properties and effects of fruit chilling and extract storage on antioxidant activity, total phenolic and anthocyanin content of four date palm (Phoenix dactylifera) cultivars. Molecules 21(4):1–14. https://doi.org/10.3390/molecules21040419 Simões M, Bennett RN, Rosa EAS (2009) Understanding antimicrobial activities of phytochemicals against multidrug resistant bacteria and biofilms. Nat Prod Rep 26(6):746–757. https://doi.org/10.1039/b821648g Abreu AC, McBain AJ, Simões M (2012) Plants as sources of new antimicrobials and resistance-modifying agents. Nat Prod Rep 29(9):1007–1021. https://doi.org/10.1039/c2np20035j Luís Â, Silva F, Sousa S, Duarte AP, Domingues F (2014) Antistaphylococcal and biofilm inhibitory activities of gallic, caffeic, and chlorogenic acids. Biofouling 30(1):69–79. https://doi.org/10.1080/08927014.2013.845878 Farhadi F, Khameneh B, Iranshahi M, Iranshahy M (2019) Antibacterial activity of flavonoids and their structure–activity relationship: an update review. Phyther Res 33(1):13–40. https://doi.org/10.1002/ptr.6208 Górniak I, Bartoszewski R, Króliczewski J (2019) Comprehensive review of antimicrobial activities of plant flavonoids. 18. https://doi.org/10.1007/s11101-018-9591-z