Molecular evidence supports the distinction between Xanthoria parietina and X. aureola (Teloschistaceae, lichenized Ascomycota)

Mycological Research - Tập 109 - Trang 187-199 - 2005
Louise Lindblom1, Stefan Ekman1
1Department of Biology, University of Bergen, Allégaten 41, N-5007 Bergen, Norway.

Tài liệu tham khảo

Acharius, 1809, ‘1810’ Acharius, 1914 Avise, 2000 Carbone, 1999, A method for designing primer sets for speciation studies in filamentous ascomycetes, Mycologia, 91, 553, 10.2307/3761358 Carbone, 2001, A microbial population-species interface: nested cladistic and coalescent interference with multilocus data, Molecular Ecology, 10, 947, 10.1046/j.1365-294X.2001.01244.x Carbone, 2001, Multilocus nested haplotype networks extended with DNA fingerprints show common origin and fine-scale, ongoing genetic divergence in a wild microbial metapopulation, Molecular Ecology, 10, 2409, 10.1046/j.0962-1083.2001.01380.x Clement, 2000, TCS: a computer program to estimate gene genealogies, Molecular Ecology, 9, 1657, 10.1046/j.1365-294x.2000.01020.x Dahl, 1973 Degelius, 1940, Contributions to the lichen flora of North America. I. Lichens from Maine, Arkiv för Botanik, 30A, 1 Erichsen, 1928, Die Flechten des Moränengebietes von Ostschleswig mit Berücksichtigung der angrenzenden Gebiete, Verhandlungen des Botanischen Vereins der Provinz Brandenburg, 70, 128 Erichsen, 1930, Die Flechten des Moränengebietes von Ostschleswig mit Berücksichtigung der angrenzenden Gebiete, Verhandlungen des Botanischen Vereins der Provinz Brandenburg, 72, 1 Felsenstein, 2003, ‘2004’ Franc, 1998, Phylogeny of Xanthoria calcicola and X. parietina, based on rDNA ITS sequences, Graphis Scripta, 9, 49 Fries, 1871, Vol. 1 2000 Gardes, 1993, ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts, Molecular Ecology, 2, 113, 10.1111/j.1365-294X.1993.tb00005.x Gaya, 1993, Phylogenetic study of Fulgensia and allied Caloplaca and Xanthoria species (Teloschistaceae, lichen-forming Ascomycota), American Journal of Botany, 90, 1095, 10.3732/ajb.90.7.1095 Hill, 1966, Aspects of the autecology of Xanthoria parietina agg, Lichenologist, 3, 207, 10.1017/S0024282966000227 Hillmann, 1920, Beiträge zur Systematik der Flechten, Annales Mycologici, 18, 1 Honegger, 2003, The impact of different long-term storage conditions on the viability of lichen-forming ascomycetes and their green algal photobiont, Trebouxia spp, Plant Biology, 5, 324, 10.1055/s-2003-40794 Hudson, 1987, Estimating the recombination parameter of a finite population model without selection, Genetical Research, 50, 245, 10.1017/S0016672300023776 Hudson, 1985, Statistical properties in the number of recombination events in the history of a sample of DNA sequences, Genetics, 111, 147, 10.1093/genetics/111.1.147 James, 1996, A new check-list of British lichens, Lichenologist, 3, 95, 10.1017/S0024282965000130 Jøgensen, 1994, Linnaean lichen names and their typification, Botanical Journal of the Linnaean Society, 115, 261, 10.1111/j.1095-8339.1994.tb01784.x Krog, 1994 Kuhner, 2003, LAMARC: estimating population genetic parameters from molecular data., 378 Kuhner, 2000, Maximum-likelihood estimation of recombination rates from population data, Genetics, 156, 1393, 10.1093/genetics/156.3.1393 Laundon, 1992, Xanthoria (Fr.) Th. Fr. (1860)., 645 Lindblom, 1997, The genus Xanthoria (Fr.) Th. Fr. in North America, Journal of the Hattori Botanical Laboratory, 83, 75 Linnaeus, 1753 Nimis, 1993 Poelt, 1969 Posada, 2002, Evaluation of methods for detecting recombination from DNA sequences: empirical data, Molecular Biology and Evolution, 19, 708, 10.1093/oxfordjournals.molbev.a004129 Posada, 1998, MODELTEST: testing the model of DNA substitution, Bioinformatics, 14, 817, 10.1093/bioinformatics/14.9.817 Posada, 2001, Intraspecific gene genealogies: trees grafting into networks, Trends in Ecology and Evolution, 16, 37, 10.1016/S0169-5347(00)02026-7 Posada, 2001, Evaluation of methods for detecting recombination from DNA sequences: Computer simulations, Proceedings of the National Academy of Sciences, USA, 98, 13757, 10.1073/pnas.241370698 Printzen, 2002, Genetic variability and its geographical distribution in the widely disjunct Cavernularia hultenii, Lichenologist, 34, 101, 10.1006/lich.2002.0381 Printzen, 2003, Phylogeography of Cavernularia hultenii: evidence of slow genetic drift in a widely disjunct lichen, Molecular Ecology, 12, 1473, 10.1046/j.1365-294X.2003.01812.x Richardson, 1967, The transplantation of lichen thalli to solve some taxonomic problems in Xanthoria parietina (L.) Th. Fr, Lichenologist, 3, 386, 10.1017/S0024282967000398 Rosenberg, 2002, Genealogical trees, coalescent theory and the analysis of genetic polymorphisms, Nature Reviews Genetics, 3, 380, 10.1038/nrg795 Rozas, 1999, DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis, Bioinformatics, 15, 174, 10.1093/bioinformatics/15.2.174 Ryan, 2002, Morphology and anatomy of the lichen thallus., 1, 8 Salzburger, 2002, Paraphyly of the Blue Tit (Parus caeruleus) suggested from cytochrome b sequences, Molecular Phylogenetics and Evolution, 24, 19, 10.1016/S1055-7903(02)00265-8 Santesson, 1984 Santesson, 1993 Santesson, 2004 Scherrer, 2003, Inter-and intraspecific variation of homologous hydrophobin (H1) gene sequences among Xanthoria spp. (lichen-forming ascomycetes), New Phytologist, 158, 375, 10.1046/j.1469-8137.2003.00740.x Smith, A. L. (1918) A Monograph of the British Lichens. Part 1. 2nd edn. British Museum (Natural History), London. Søchting, 1997, Two major anthraquinone chemosyndromes in Teloschistaceae, Bibliotheca Lichenologica, 68, 135 Søchting, 2002, Revision of Xanthomendoza (Teloschistaceae, Lecanorales) based on morphology, anatomy, secondary metabolites, and molecular data, Mitteilungen aus dem Institut für Allgemeine Botanik, Hamburg, 30-32, 225 Steiner, 1970, Die Anthrachinone von Caloplacaceae und Teloschisiaceae (Lichenes). Vorträge aus dem Gesamtgebiet der Botanik, Neue Folge [, Deutsch, bot. Ges., 4, 23 Sturmbauer, 2003, Evolution of the tribe Tropheini from lake Tanganyika: synchronized explosive speciation producing multiple evolutionary parallelism, Hydrobiologia, 500, 51, 10.1023/A:1024680201436 Swofford, 2001 Swofford, 1996, Phylogenetic inference., 407 Templeton, 1992, A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation, Genetics, 132, 619, 10.1093/genetics/132.2.619 Thompson, 1997, The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucleic Acids Research, 24, 4876, 10.1093/nar/25.24.4876 White, 1990, Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics., 315