Molecular biology of the dimorphic fungi Paracoccidioides spp

Almeida, 2009, Cdc42p controls yeast-cell shape and virulence of Paracoccidioides brasiliensis, Fungal Genetics and Biology, 46, 919, 10.1016/j.fgb.2009.08.004 Almeida, 2006, New insights into the cell cycle profile of Paracoccidioides brasiliensis, Fungal Genetics and Biology, 43, 401, 10.1016/j.fgb.2006.01.012 Almeida, 2007, Genome size and ploidy of Paracoccidioides brasiliensis reveals a haploid DNA content: flow cytometry and GP43 sequence analysis, Fungal Genetics and Biology, 44, 25, 10.1016/j.fgb.2006.06.003 Bagagli, 2006, Phylogenetic and evolutionary aspects of Paracoccidioides brasiliensis reveal a long coexistence with animal hosts that explain several biological features of the pathogen, Infection, Genetics and Evolution, 6, 344, 10.1016/j.meegid.2005.12.002 Bailão, 2006, Differential gene expression by Paracoccidioides brasiliensis in host interaction conditions: representational difference analysis identifies candidate genes associated with fungal pathogenesis, Microbes and Infection, 8, 2686, 10.1016/j.micinf.2006.07.019 Bastos, 2007, The transcriptome analysis of early morphogenesis in Paracoccidioides brasiliensis mycelium reveals novel and induced genes potentially associated to the dimorphic process, BMC Microbiology, 10, 29, 10.1186/1471-2180-7-29 Batista, 2010, Is the geographical origin of a Paracoccidioides brasiliensis isolate important for antigen production for regional diagnosis of paracoccidioidomycosis?, Mycoses, 53, 176, 10.1111/j.1439-0507.2008.01687.x Brandhorst, 1999, Targeted gene disruption reveals an adhesin indispensable for pathogenicity of Blastomyces dermatitidis, Journal of Experimental Medicine, 189, 1207, 10.1084/jem.189.8.1207 Brummer, 1993, Paracoccidioidomycosis: an update, Clinical Microbiology Reviews, 6, 89, 10.1128/CMR.6.2.89 Buissa-Filho, 2008, The monoclonal antibody against the major diagnostic antigen of Paracoccidioides brasiliensis mediates immune protection in infected BALB/c mice challenged intratracheally with the fungus, Infection and Immunity, 76, 3321, 10.1128/IAI.00349-08 Camargo, 1988, Production of Paracoccidioides brasiliensis exoantigens for immunodiffusion tests, Journal of Clinical Microbiology, 26, 2147, 10.1128/JCM.26.10.2147-2151.1988 Cano, 1998, Electrophoretic karyotypes and genome sizing of the pathogenic fungus Paracoccidioides brasiliensis, Journal of Clinical Microbiology, 36, 742, 10.1128/JCM.36.3.742-747.1998 Carvalho, 2005, Virulence of Paracoccidioides brasiliensis and gp43 expression in isolates bearing known PbGP43 genotype, Microbes and Infection, 7, 55, 10.1016/j.micinf.2004.09.008 Choquer, 2008, Ku70 or Ku80 deficiencies in the fungus Botrytis cinerea facilitate targeting of genes that are hard to knock out in a wild-type context, FEMS Microbiology Letters, 289, 225, 10.1111/j.1574-6968.2008.01388.x Cisalpino, 1996, Cloning, characterization, and epitope expression of the major diagnostic antigen of Paracoccidioides brasiliensis, Journal of Biological Chemistry, 271, 4553, 10.1074/jbc.271.8.4553 Costa, 2007, Transcriptome profiling of Paracoccidioides brasiliensis yeast-phase cells recovered from infected mice brings new insights into fungal response upon host interaction, Microbiology, 153, 4194, 10.1099/mic.0.2007/009332-0 Cutfield, 1999, The structure of the exo-beta-(1,3)-glucanase from Candida albicans in native and bound forms: relationship between a pocket and groove in family 5 glycosyl hydrolases, Journal of Molecular Biology, 294, 771, 10.1006/jmbi.1999.3287 da Silva Ferreira, 2006, Transcriptome analysis and molecular studies on sulfur metabolism in the human pathogenic fungus Paracoccidioides brasiliensis, Molecular Genetics and Genomics, 276, 450, 10.1007/s00438-006-0154-4 da Silva, 2006, Melanin in the dimorphic fungal pathogen Paracoccidioides brasiliensis: effects on phagocytosis, intracellular resistance and drug susceptibility, Microbes and Infection, 8, 197, 10.1016/j.micinf.2005.06.018 de Groot, 1998, Agrobacterium tumefaciens-mediated transformation of filamentous fungi, Nature Biotechnology, 16, 839, 10.1038/nbt0998-839 Feitosa, 2003, Chromosomal polymorphism, syntenic relationships, and ploidy in the pathogenic fungus Paracoccidioides brasiliensis, Fungal Genetics and Biology, 39, 60, 10.1016/S1087-1845(03)00003-3 Felipe, 2005, Transcriptional profiles of the human pathogenic fungus Paracoccidioides brasiliensis in mycelium and yeast cells, The Journal of Biological Chemistry, 280, 24706, 10.1074/jbc.M500625200 Garcia, 2009, Gene expression analysis of Paracoccidioides brasiliensis transition from conidium to yeast cell, Medical Mycology, 30, 1, 10.1080/13693780903055673 Gauthier, 2010, SREB, a GATA transcription factor that directs disparate fates in Blastomyces dermatitidis including morphogenesis and siderophore biosynthesis, PLoS Pathogens, 6, e1000846, 10.1371/journal.ppat.1000846 González, 2008, Paracoccidioides brasiliensis conidia recognize fibronectin and fibrinogen which subsequently participate in adherence to human type II alveolar cells: involvement of a specific adhesin, Microbial Pathogenesis, 44, 389, 10.1016/j.micpath.2007.11.001 González, 2005, Purification and partial characterization of a Paracoccidioides brasiliensis protein with capacity to bind to extracellular matrix proteins, Infection and Immunity, 73, 2486, 10.1128/IAI.73.4.2486-2495.2005 Hanna, 2000, Adherence and intracellular parasitism of Paracoccidioides brasiliensis in Vero cells, Microbes and Infection, 2, 877, 10.1016/S1286-4579(00)00390-7 Hebeler-Barbosa, 2003, Comparison of the sequences of the internal transcribed spacer regions and PbGP43 genes of Paracoccidioides brasiliensis from patients and armadillos (Dasypus novemcinctus), Journal of Clinical Microbiology, 41, 5735, 10.1128/JCM.41.12.5735-5737.2003 Hernández, 2010, A 32-kilodalton hydrolase plays an important role in Paracoccidioides brasiliensis adherence to host cells and influences pathogenicity, Infection and Immunity, 78, 5280, 10.1128/IAI.00692-10 Hoekema, 1983, A binary plant vector strategy based on separation of vir- and T-region of the Agrobacterium tumefaciens Ti-plasmid, Nature, 303, 179, 10.1038/303179a0 Hogan, 1997, Transforming DNA integrates at multiple sites in the dimorphic fungal pathogen Blastomyces dermatitidis, Gene, 186, 219, 10.1016/S0378-1119(96)00713-5 Johnson, 1999, Cdc42: an essential Rho-type GTPase controlling eukaryotic cell polarity, Microbiology and Molecular Biology Reviews, 63, 54, 10.1128/MMBR.63.1.54-105.1999 Krappmann, 2006, Gene targeting in Aspergillus fumigatus by homologous recombination is facilitated in a nonhomologous end- joining-deficient genetic background, Eukaryotic Cell, 5, 212, 10.1128/EC.5.1.212-215.2006 Kummasook, 2010, An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei, Medical Mycology, 48, 1066, 10.3109/13693781003801219 Leal, 2004, Agrobacterium tumefaciens-mediated transformation of Paracoccidioides brasiliensis, Medical Mycology, 42, 391, 10.1080/13693780410001712007 Mackenzie, 1997, Identification of Glu-330 as the catalytic nucleophile of Candida albicans exo-beta-(1,3)-glucanase, Journal of Biological Chemistry, 272, 3161, 10.1074/jbc.272.6.3161 Matute, 2006, Cryptic speciation and recombination in the fungus Paracoccidioides brasiliensis as revealed by gene genealogies, Molecular Biology and Evolution, 23, 65, 10.1093/molbev/msj008 Matute, 2008, Evidence for positive selection in putative virulence factors within the Paracoccidioides brasiliensis species complex, PLoS Neglected Tropical Diseases, 2, e296, 10.1371/journal.pntd.0000296 McEwen, 1987, Experimental murine paracoccidiodomycosis induced by the inhalation of conidia, Journal of Medical and Veterinary Mycology, 25, 165, 10.1080/02681218780000231 McEwen, 1987, Nuclear staining of Paracoccidioides brasiliensis conidia, Journal of Medical and Veterinary Mycology, 25, 10.1080/02681218780000411 Mendes-Giannini, 2006, Binding of extracellular matrix proteins to Paracoccidioides brasiliensis, Microbes and Infection, 8, 1550, 10.1016/j.micinf.2006.01.012 Michielse, 2005, Agrobacterium-mediated transformation as a tool for functional genomics in fungi, Current Genetics, 48, 1, 10.1007/s00294-005-0578-0 Monteiro, 2009, Genomic DNA microarray comparison of gene expression patterns in Paracoccidioides brasiliensis mycelia and yeasts in vitro, Microbiology, 155, 2795, 10.1099/mic.0.027441-0 Morais, 2000, Polymorphism in the gene coding for the immunodominant antigen gp43 from the pathogenic fungus Paracoccidioides brasiliensis, Journal of Clinical Microbiology, 38, 3960, 10.1128/JCM.38.11.3960-3966.2000 Moura-Campos, 1995, Expression and isoforms of gp43 in different strains of Paracoccidioides brasiliensis, Journal of Medicine and Veterinary Mycology, 33, 223, 10.1080/02681219580000461 Nemecek, 2006, Global control of dimorphism and virulence in fungi, Science, 312, 583, 10.1126/science.1124105 Nosanchuk, 1997, Cellular charge of Cryptococcus neoformans: contributions from the capsular polysaccharide, melanin, and monoclonal antibody binding, Infection and Immunity, 65, 1836, 10.1128/IAI.65.5.1836-1841.1997 Nunes, 2005, Transcriptome analysis of Paracoccidioides brasiliensis cells undergoing mycelium-to-yeast transition, Eukaryotic Cell, 4, 2115, 10.1128/EC.4.12.2115-2128.2005 Parente, 2008, Comparison of transcription of multiple genes during mycelia transition to yeast cells of Paracoccidioides brasiliensis reveals insights to fungal differentiation and pathogenesis, Mycopathologia, 165, 259, 10.1007/s11046-007-9078-8 Pereira, 2009, Preferential transcription of Paracoccidioides brasiliensis genes: host niche and time-dependent expression, Memorias do Instituto Oswaldo Cruz, 104, 486, 10.1590/S0074-02762009000300015 Pöggeler, 2006, Highly efficient generation of signal transduction knockout mutants using a fungal strain deficient in the mammalian ku70 ortholog, Gene, 378, 1, 10.1016/j.gene.2006.03.020 Puccia, 1986, Exocellular components of Paracoccidioides brasiliensis: identification of a specific antigen, Infection and Immunity, 53, 199, 10.1128/IAI.53.1.199-206.1986 Puccia, 2008, Diversity in Paracoccidioides brasiliensis. The PbGP43 gene as a genetic marker, Mycopathologia, 165, 275, 10.1007/s11046-007-9055-2 Restrepo, 2001, The habitat of Paracoccidioides brasiliensis: how far from solving the riddle?, Medical Mycology, 39, 233, 10.1080/714031028 Richini-Pereira, 2009, Importance of xenarthrans in the eco-epidemiology of Paracoccidioides brasiliensis, BMC Research Notes, 2, 228, 10.1186/1756-0500-2-228 Rocha, 2009, Transcription regulation of the Pbgp43 gene by nitrogen in the human pathogen Paracoccidioides brasiliensis, Fungal Genetics and Biology, 46, 85, 10.1016/j.fgb.2008.10.009 Rocha, 2009, Polymorphism in the flanking regions of the PbGP43 gene from the human pathogen Paracoccidioides brasiliensis: search for protein binding sequences and poly(A) cleavage sites, BMC Microbiology, 9, 277, 10.1186/1471-2180-9-277 Ruiz-Díez, 2002, Strategies for the transformation of filamentous fungi, Journal of Applied Microbiology, 92, 189, 10.1046/j.1365-2672.2002.01516.x Sano, 1999, Comparison between human and armadillo Paracoccidioides brasiliensis isolates by random amplified polymorphic DNA analysis, Mycopathologia, 143, 165, 10.1023/A:1006949113529 Silva, 2009, Resistance of melanized yeast cells of Paracoccidioides brasiliensis to antimicrobial oxidants and inhibition of phagocytosis using carbohydrates and monoclonal antibody to CD18, Memorias do Instituto Oswaldo Cruz, 104, 644, 10.1590/S0074-02762009000400019 Snoek, 2009, Construction of an hdfA Penicillium chrysogenum strain impaired in non-homologous end-joining and analysis of its potential for functional analysis studies, Fungal Genetics and Biology, 46, 418, 10.1016/j.fgb.2009.02.008 Soares, 2010, Extracellular Paracoccidioides brasiliensis phospholipase B involvement in alveolar macrophage interaction, BMC Microbiology, 10, 241, 10.1186/1471-2180-10-241 Soares, 2005, Hygromycin B-resistance phenotype acquired in Paracoccidioides brasiliensis via plasmid DNA integration, Medical Mycology, 43, 719, 10.1080/13693780500159118 Sullivan, 2002, Agrobacterium tumefaciens integrates transfer DNA into single chromosomal sites of dimorphic fungi and yields homokaryotic progeny from multinucleate yeast, Eukaryotic Cell, 1, 895, 10.1128/EC.1.6.895-905.2002 Teixeira, 2009, Phylogenetic analysis reveals a high level of speciation in the Paracoccidioides genus, Molecular Phylogenetics and Evolution, 52, 273, 10.1016/j.ympev.2009.04.005 Torres, 2010, Presence and expression of the mating type locus in Paracoccidioides brasiliensis isolates, Fungal Genetics and Biology, 47, 373, 10.1016/j.fgb.2009.11.005 Travassos, 2008, Attempts at a peptide vaccine against paracoccidioidomycosis, adjuvant to chemotherapy, Mycopathologia, 165, 341, 10.1007/s11046-007-9056-1 Untereiner, 2004, The Ajellomycetaceae, a new family of vertebrate-associated Onygenales, Mycologia, 96, 812, 10.2307/3762114 Vicentini, 1994, Binding of Paracoccidioides brasiliensis to laminin through surface glycoprotein gp43 leads to enhancement of fungal pathogenesis, Infection and Immunity, 62, 1465, 10.1128/IAI.62.4.1465-1469.1994 Wang, 2009, CDKs and the yeast-hyphal decision, Current Opinion in Microbiology, 12, 644, 10.1016/j.mib.2009.09.002 Woods, 1992, In vivo generation of linear plasmids with addition of telomeric sequences by Histoplasma capsulatum, Molecular Microbiology, 6, 3603, 10.1111/j.1365-2958.1992.tb01796.x Woods, 1998, Rare homologous gene targeting in Histoplasma capsulatum: disruption of the URA5Hc gene by allelic replacement, Journal of Bacteriology, 180, 5135, 10.1128/JB.180.19.5135-5143.1998 Worsham, 1990, Development of a genetic transformation system for Histoplasma capsulatum: complementation of uracil auxotrophy, Molecular and General Genetics, 221, 358, 10.1007/BF00259400