Molecular and morphological differences between two geographic populations of Salanx ariakensis (Salangidae) from Korea and Japan
Tóm tắt
Geographic variations of a salangid, Salanx ariakensis, from Korea and Japan, based on partial mtDNA cyt b gene sequences and morphometric data, are presented and compared with Salanx cuvieri from China. Analyses of molecular variance (AMOVA) suggested that the two populations of S. ariakensis differed significantly from each other in pairwise fixation index (F
ST = 0.43), although their reciprocal monophyly was not constructed in the phylogenetic analysis. The phylogenetic analysis, however, supported the reciprocal monophyly of S. ariakensis (Korean population + Japanese population) and S. cuvieri. Differences in genetic structure between the two populations of S. ariakensis were suggested by diversity indices, mismatch distribution shape, and minimum spanning network. In particular, diversity indices indicated that the Korean population was historically larger and more stable than the Japanese population. In addition, both the principal component analysis (PCA) and canonical discriminant analysis (CDA) for morphometric characters, and the Kruskal–Wallis test for some meristic characters, showed that the two populations of S. ariakensis differed from each other, although morphological differences between the two populations of S. ariakensis were smaller than those between S. ariakensis and S. cuvieri. Such morphological differences were consistent with the differences in mtDNA.
Tài liệu tham khảo
JC Avise (2000) Phylogeography: the history and formation of species Harvard University Press London 135–211
KC Choi SR Jeon IS Kim YM Son (2002) Coloured illustrations of the freshwater fishes of Korea (in Korean) Hyang-mun Seoul 147–148
MN Dawson KD Louie M Barlow DK Jacobs CC Swift (2002) ArticleTitleComparative phylogeography of sympatric sister species, Clevelandia ios and Eucyclogobius newberryi (Teleostei, Gobiidae), across the California Transition Zone Mol Ecol 11 1065–1075 Occurrence Handle12030983 Occurrence Handle1:CAS:528:DC%2BD38Xls1arsrk%3D Occurrence Handle10.1046/j.1365-294X.2002.01503.x
S Dou D Chen (1994) ArticleTitleTaxonomy, biology and abundance of icefishes, or noodlefishes (Salangidae) in the Yellow River estuary of the Bohai Sea, China J Fish Biol 45 737–748 Occurrence Handle10.1111/j.1095-8649.1994.tb00940.x
WS Grant BW Bowen (1998) ArticleTitleShallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation J Hered 89 415–426 Occurrence Handle10.1093/jhered/89.5.415
M Hibino I Kinoshita T Ohta M Tanaka (2002) ArticleTitleMorphology of Ariake icefish Salanx ariakensis larvae in the Chikugo estuary Jpn J Ichthyol 49 103–108
H Hosaya (2002) Salangidae T Nakabo (Eds) Fishes of Japan with pictorial keys to the species, English edn Tokai University Press Tokyo 298
DS Jordan JO Snyder (1902) ArticleTitleA review of the salmonoid fishes of Japan Proc U S Natl Mus 24 567–593
H Kawanabe N Mizuno K Hosoya (Eds) (2001) Freshwater fishes of Japan (in Japanese) Yama-kei Tokyo 84–85
IS Kim (1997) Illustrated encyclopedia of fauna and flora of Korea (in Korean), vol 37. Freshwater fishes Ministry of Education Seoul
IS Kim JY Park (2002) Freshwater fishes of Korea (in Korean) Kyo-Hak Seoul
JK Kim JI Choi DS Chang JT Na YU Kim (2003) ArticleTitleDistribution of fish eggs, larvae and juveniles around the Youngsan River estuary J Kor Fish Soc 36 486–494
M Kimura (1980) ArticleTitleA simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences J Mol Evol 16 116–120 Occurrence Handle10.1007/BF01731581
K Kishinouye (1901) ArticleTitleNew species of Salanx found in Ariake Bay Zool Mag (Tokyo) 13 359–360
A Kitamura (2004) ArticleTitleQuaternary climatic changes and species diversity: responses of marine organisms to glacial-interglacial cycles Fossils 75 54–59
Kumar S, Tamura K, Nei M (1993) Guidelines for choosing distance measures. In: MEGA: molecular evolutionary genetics analysis, version 1.01. Pennsylvania State University, University Park, pp 27–29
Leviton AE, Gibbs RH Jr, Heal E, Dawson CE (1985) Standards in herpetology and ichthyology: Part I. Standard symbolic codes for institutional resource collections in herpetology and ichthyology. Copeia 1985:802–832
MA McCartney J Acevedo C Heredia C Rico B Quenoville S Berminghams WO McMillan (2003) ArticleTitleGenetic mosaic in a marine species flock Mol Ecol 12 2963–2973 Occurrence Handle14629377 Occurrence Handle1:CAS:528:DC%2BD3sXpvVOjsL4%3D Occurrence Handle10.1046/j.1365-294X.2003.01946.x
T Minamoto I Shimizu (2002) ArticleTitlePhylogenetic relationships among osmerid and salangid fish inferred for mitochondrial cytochrome b gene sequences Mem Fac Sci Kyoto Univ (Ser Biol) 18 1–13 Occurrence Handle1:CAS:528:DC%2BD3sXkvVWqt78%3D
H Mizutani S Matsui N Takeshita (2000) ArticleTitleEmbryonic, larval and juvenile development of Salanx ariakensis (Pisces: Salangidae) Suisanzoshoku 48 497–502
T Mori K Uchida (1934) ArticleTitleA revised catalogue of the fishes of Korea J Soc Chosen Nat Hist 19 1–16
T Nakabo (2002) Introduction to ichthyology T Nakabo (Eds) Fishes of Japan with pictorial keys to the species, English edn Tokai University Press Tokyo xxi–xlii
M Oshima (1919) ArticleTitleContributions to the study of the fresh water fishes of the island of Formosa Ann Carnegie Mus 12 169–328
S Palumbi A Martin S Romano WO McMillan L Stice G Grabowski (1991) The simple fool's guide to PCR University of Hawaii Honolulu
JH Pan CY Zheng HL Wu JH Liu (1991) The freshwater fishes of Guangdong Province Guangdong Science & Technology Press Guangdong
TW Quinn (1992) ArticleTitleThe genetic legacy of mother goose: phylogeographic patterns of lesser snow goose Chen caerulescens caerulescens maternal lineages Mol Ecol 1 105–117 Occurrence Handle1344986 Occurrence Handle1:CAS:528:DyaK3sXitlSmu7k%3D
J Randall KKP Lim (2000) ArticleTitleA checklist of the fishes of the South China Sea Raffles Bull Zool Suppl 8 569–667
TR Roberts (1984) ArticleTitleSkeletal anatomy and classification of the neotenic Asian salmoniform superfamily Salangoidea (icefishes or noodlefishes) Proc Calif Acad Sci 43 179–220
AR Rogers H Harpending (1992) ArticleTitlePopulation growth makes waves in the distribution of pairwise genetic differences Mol Biol Evol 9 552–569 Occurrence Handle1316531 Occurrence Handle1:STN:280:By2B287jtFI%3D
RK Saiki DH Gelfand S Stoffel SJ Scharf R Higuchi GT Horn KB Mullis HA Erlich (1988) ArticleTitlePrimer-directed enzymatic amplification of DNA with a thermostable DNA polymerase Science 239 487–491 Occurrence Handle2448875 Occurrence Handle1:CAS:528:DyaL1cXht1Ogt7k%3D
N Saitou M Nei (1987) ArticleTitleThe neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406–425 Occurrence Handle3447015 Occurrence Handle1:STN:280:BieC1cbgtVY%3D
S Schneider D Roessli L Excofier (2000) Arlequin version 2.000. A software for population genetics data University of Geneva Geneva
JD Thompson DG Higgins TG Gibson (1994) ArticleTitleClustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673–4680 Occurrence Handle7984417 Occurrence Handle1:CAS:528:DyaK2MXitlSgu74%3D
Y Wakiya N Takahasi (1937) ArticleTitleStudy on fishes of the family Salangidae J Coll Agric Tokyo Univ 14 265–296
S Wang Z Wang G Li Y Cao (2001) The fauna of Hebei, China Hebei Science and Technology Hebei
JH Zar (1999) Biostatistical analysis EditionNumber4th edn Prentice Hall New Jersey
YL Zhang XG Qiao (1994) ArticleTitleStudy on phylogeny and zoogeography of fishes of the family Salangidae Acta Zool Taiwanica 5 95–113