Molecular Cloning, Expression, Purification, and Characterization of Fructose-1,6-bisphosphate Aldolase from Thermus aquaticus
Tài liệu tham khảo
Brock, 1969, Thermus aquaticus gen. n., and sp. n., a non-sporulating extreme thermophile, J. Bacteriol., 98, 289, 10.1128/JB.98.1.289-297.1969
Brock, 1986, Introduction: An overview of the thermophiles, 1
Haney, 1999, Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species, Proc. Natl. Acad. Sci. USA, 96, 3578, 10.1073/pnas.96.7.3578
Rutter, 1964, Evolution of aldolase, Fed. Proc., 23, 1248
Plaumann, 1997, Multiple recruitment of class-I aldolase to chloroplasts and eubacterial origin of eukaryotic class-II aldolases revealed by cDNAs from Euglena gracilis, Curr. Genet., 31, 430, 10.1007/s002940050226
Freeze, 1970, Thermostable aldolase from Thermus aquaticus, J. Bacteriol., 101, 541, 10.1128/JB.101.2.541-550.1970
De Montigny, 1996, Functional characterization of an extreme thermophilic class II fructose-1,6-bisphosphate aldolase, Eur. J. Biochem., 241, 243, 10.1111/j.1432-1033.1996.0243t.x
Willard, 1968, Purification and characterization of the fructose diphosphate aldolases from Anacystis nidulans and Saprospira thermalis, Biochim. Biophys. Acta, 151, 438, 10.1016/0005-2744(68)90112-5
Blom, 1996, Novel active site in Escherichia coli fructose 1,6-bisphosphate aldolase, Nat. Struct. Biol., 3, 856, 10.1038/nsb1096-856
Qamar, 1996, Identification of arginine 331 as an important active site residue in the class II fructose-1,6-bisphosphate aldolase of Escherichia coli, Protein Sci., 5, 154, 10.1002/pro.5560050119
Plater, 1999, Conserved residues in the mechanism of the E. coli class II FBP-aldolase, J. Mol. Biol., 285, 843, 10.1006/jmbi.1998.2376
Hall, 1999, The crystal structure of Escherichia coli class II fructose-1,6-bisphosphate aldolase in complex with phosphoglycolohydroxamate reveals details of mechanism and specificity, J. Mol. Biol., 287, 383, 10.1006/jmbi.1999.2609
Ausubel, 1987
Myers, 1988, Mechanism of stimulation of T7 DNA polymerase by Escherichia coli single-stranded DNA binding protein (SSB), J. Biol. Chem., 263, 17006, 10.1016/S0021-9258(18)37490-8
Sambrook, 1989
Racker, 1947, Spectrophotometric measurement of hexokinase and phosphohexokinase activity, J. Biol. Chem., 167, 843, 10.1016/S0021-9258(17)30970-5
Good, 1966, Hydrogen ion buffers for biological research, Biochemistry, 5, 467, 10.1021/bi00866a011
Laemmli, 1970, Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, 227, 680, 10.1038/227680a0
Meijer, 1985, The histochemical demonstration of fructose diphosphate aldolase activity using a semipermeable membrane technique, Histochem. J., 17, 1271, 10.1007/BF01002508
Oshima, 1986, The genes and genetics apparatus of extreme thermophiles, 137
http://www.dna.affrc.go.jp/nakamura/codon.html.
Danson, 1998, Structure, function and stability of enzymes from the Archea, Trends microbiol., 6, 307, 10.1016/S0966-842X(98)01316-X
Branden, 1991
Argos, 1979, Thermal stability and protein structure, Biochemistry, 18, 5698, 10.1021/bi00592a028
Menendez-Arias, 1989, Engineering protein thermal stability: Sequence statistics point to residue substitutions in α-helices, J. Mol. Biol., 206, 397, 10.1016/0022-2836(89)90488-9
Wilquet, 1999, The role of the first letter in the relationship between genomic GC content and protein amino acid composition, Res. Microbiol., 150, 21, 10.1016/S0923-2508(99)80043-6
Mrabet, 1992, Arginine residues as stabilizing elements in proteins, Biochemistry, 31, 2239, 10.1021/bi00123a005
Merkler, 1981, Protein thermostability, Int. J. Peptide Protein Res., 18, 430, 10.1111/j.1399-3011.1981.tb03004.x
Flechner, 1999, Chloroplast class I and class II aldolases are bifunctional for fructose-1,6-biphosphate and sedoheptulose-1,7-biphosphate cleavage in the Calvin cycle, FEBS Lett., 447, 200, 10.1016/S0014-5793(99)00285-9
http://www.cmpharm.ucsf.edu/∼nomi/nnpredict.html.
Roger, 1999, Primary structure and phylogenetic relationship of a malate dehydrogenase gene from Giardia lamblia, J. Mol. Evol., 48, 750, 10.1007/PL00006519
Steelwagen, 1978, Relationship of protein thermostability to accessible surface area, Nature, 275, 342, 10.1038/275342a0
Lewin, 1965, Isolation and some physiological features of Saprospira thermalis, Can. J. Microbiol., 11, 77, 10.1139/m65-010
Baldwin, 1978, Purification and characterization of the class-II D-fructose 1,6-bisphosphate aldolase from Escherichia coli (Crookes' strain), Biochem. J., 169, 633, 10.1042/bj1690633
Jack, 1971, The primary structure of yeast aldolase, Biochem. J., 124, 68P, 10.1042/bj1240068Pb
Sugimoto, 1971, Thermal properties of fructose-1,6-diphosphate aldolase from thermophilic bacteria, Biochim. Biophys. Acta, 235, 210, 10.1016/0005-2744(71)90049-0
Thompson, 1994, CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673