Modelling mangrove forest structure and species composition over tidal inundation gradients: The feedback between plant water use and porewater salinity in an arid mangrove ecosystem

Ball, 1992, Proposed experimental tests of a theory of fine microstructure and the two-well problem, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 338, 389 Ball, 1988, Ecophysiology of mangroves, Trees - Structure and Function, 129 Bathmann, J., Peters, R., Berger, U., Walther, M., Vollhüter, J., Wudel, C., 2020a. pyMANGA: Modelling mangrove forest structure and feedbacks with porewater salinity; 10.5281/zenodo.4032701. 10.5281/zenodo.4032701. Bathmann, 2020, The MANgrove groundwater feedback model (MANGA) ’describing belowground competition based on first principles, Ecol Modell, 420, 108973, 10.1016/j.ecolmodel.2020.108973 Berger, 2000, A new approach to spatially explicit modelling of forest dynamics: spacing, ageing and neighbourhood competition of mangrove trees, Ecol Modell, 132, 287, 10.1016/S0304-3800(00)00298-2 Brunskill, 2001, Geochemistry and particle size of surface sediments of exmouth gulf, northwest shelf, australia, Cont Shelf Res, 21, 157, 10.1016/S0278-4343(00)00076-5 Cintron, 1983, Mangrove Forests: Ecology and response to natural and man induced stressors Cintron, 1978, Mangroves of arid environments in puerto rico and adjacent islands, Biotropica, 10, 110, 10.2307/2388013 Clarke, 1993, The intertidal distribution of the grey mangrove (avicennia marina) in southeastern australia: the effects of physical conditions, interspecific competition, and predation on propagule establishment and survival, Austral Ecol, 18, 307, 10.1111/j.1442-9993.1993.tb00458.x Cottam, 1956, The use of distance measures in phytosociological sampling, Ecology, 37, 451, 10.2307/1930167 Dahdouh-Guebas, 2006, Empirical estimate of the reliability of the use of the point-Centred quarter method (PCQM): solutions to ambiguous field situations and description of the PCQM+ protocol, For. Ecol. Manage., 228, 1, 10.1016/j.foreco.2005.10.076 Davies, 2018, Living on the edge: microbes and carbon cycling in mangrove soils along the west coast of Australia Dobbertin, 2005, Tree growth as indicator of tree vitality and of tree reaction to environmental stress: a review, Eur J For Res, 124, 319, 10.1007/s10342-005-0085-3 Ebeling, 2019, Potential of mixed hydraulic barriers to remediate seawater intrusion, Sci. Total Environ., 693, 133478, 10.1016/j.scitotenv.2019.07.284 Edwards, 1999, A methodology for benchmarking real time kinematic GPS, Survey Review, 35, 163, 10.1179/sre.1999.35.273.163 Feller, 2010, Biocomplexity in mangrove ecosystems, Ann Rev Mar Sci, 2, 395, 10.1146/annurev.marine.010908.163809 Feller, 2003, Nitrogen vs. phosphorus limitation across an ecotonal gradient in a mangrove forest, Biogeochemistry, 62, 145, 10.1023/A:1021166010892 Gates, 1978, Zone of influence models for competition in plantations, Adv Appl Probab, 10, 299, 10.2307/1426632 Grimm, 2020, The ODD protocol for describing agent-Based and other simulation models: A Second update to improve clarity, replication, and structural realism, Journal of Artificial Societies and Social Simulation, 7 Herbert, E. R., Boon, P., Burgin, A. J., Neubauer, S. C., Franklin, R. B., Ardon, M., Hopfensperger, K. N., Lamers, L. P., Gell, P., Langley, J. A., 2015. A global perspective on wetland salinization: Ecological consequences of a growing threat to freshwater wetlands. 10.1890/ES14-00534.1. Howard, 2014, Coastal blue carbon: methods for assessing carbon stocks and emissions factors in mangroves, tidal salt marshes, and seagrasses Islam, 2008, Mangrove wetland ecosystems in ganges-Brahmaputra delta in bangladesh, Front. Earth Sci. China, 2, 439, 10.1007/s11707-008-0049-2 Koch, E. W., Barbier, E. B., Silliman, B. R., Reed, D. J., Perillo, G. M., Hacker, S. D., Granek, E. F., Primavera, J. H., Muthiga, N., Polasky, S., Halpern, B. S., Kennedy, C. J., Kappel, C. V., Wolanski, E., 2009. Non-linearity in ecosystem services: Temporal and spatial variability in coastal protection. 10.1890/080126. Krauss, 2007, Sap flow characteristics of neotropical mangroves in flooded and drained soils, Tree Physiol., 27, 775, 10.1093/treephys/27.5.775 Lin, 2014, The role of belowground competition and plastic biomass allocation in altering plant mass-density relationships, Oikos, 123, 248, 10.1111/j.1600-0706.2013.00921.x Loneragan, 2013, Impact of cyclones and aquatic macrophytes on recruitment and landings of tiger prawns penaeus esculentus in exmouth gulf, western australia, Estuar Coast Shelf Sci, 127, 46, 10.1016/j.ecss.2013.03.024 Lovelock, 2009, Nutrient enrichment increases mortality of mangroves, PLoS ONE, 4, e5600, 10.1371/journal.pone.0005600 Lovelock, 2011, Intense storms and the delivery of materials that relieve nutrient limitations in mangroves of an arid zone estuary, Functional Plant Biology, 38, 514, 10.1071/FP11027 Lovelock, 2017, Isotopic signatures of stem water reveal differences in water sources accessed by mangrove tree species, Hydrobiologia, 803, 133, 10.1007/s10750-017-3149-8 Lovelock, 2010, Mangrove forest and soil development on a rapidly accreting shore in new zealand, Ecosystems, 13, 437, 10.1007/s10021-010-9329-2 Lugo, 1980, Mangrove ecosystems: successional or steady state?, Biotropica, 12, 65, 10.2307/2388158 Macnae, 1969, A general account of the fauna and flora of mangrove swamps and forests in the indo-West-Pacific region, Adv. Mar. Biol., 10.1016/S0065-2881(08)60438-1 McKee, 1993, Determinants of mangrove species distribution in neotropical forests: biotic and abiotic factors affecting seedling survival and growth., LSU Historical Dissertations and Theses Melcher, 2001, Water relations of coastal and estuarine rhizophora mangle: xylem pressure potential and dynamics of embolism formation and repair, Springer Paling, 2008, Assessing the extent of mangrove change caused by cyclone vance in the eastern exmouth gulf, northwestern australia, Estuar Coast Shelf Sci, 77, 603, 10.1016/j.ecss.2007.10.019 Passioura, 1992, Mangroves may salinize the soil and in so doing limit their transpiration rate, Funct Ecol, 6, 476, 10.2307/2389286 Penn, 1986, Spawning stock-recruitment relationships and environmental influences on the tiger prawn (penaeus esculentus) fishery in exmouth gulf, western australia, Mar. Freshwater Res., 37, 491, 10.1071/MF9860491 Perri, 2018, Plant osmoregulation as an emergent water-Saving adaptation, Water Resour Res, 54, 2781, 10.1002/2017WR022319 Perri, 2019, Xylem’Phloem hydraulic coupling explains multiple osmoregulatory responses to salt stress, New Phytol., 224, 644, 10.1111/nph.16072 Perri, 2018, Vegetation controls on dryland salinity, Geophys Res Lett, 45, 11,669, 10.1029/2018GL079766 Perri, 2017, Salinity and periodic inundation controls on the soil-plant-atmosphere continuum of gray mangroves, Hydrol Process, 31, 1271, 10.1002/hyp.11095 Peters, 2014, Changes in allometric relations of mangrove trees due to resource availability ’ a new mechanistic modelling approach, Ecol Modell, 283, 53, 10.1016/j.ecolmodel.2014.04.001 Peters, 2020, Partial canopy loss of mangrove trees: mitigating water scarcity by physical adaptation and feedback on porewater salinity, Estuar Coast Shelf Sci, 106797 Peters, 2018, A new mechanistic theory of self-thinning: adaptive behaviour of plants explains the shape and slope of self-thinning trajectories, Ecol Modell, 390, 1, 10.1016/j.ecolmodel.2018.10.005 Preen, 1997, Distribution and abundance of dugongs, turtles, dolphins and other megafauna in shark bay, ningaloo reef and exmouth gulf, western australia, Wildlife Research, 24, 185, 10.1071/WR95078 Sam, 1998, Spatial variations of groundwater salinity in a mangrove-salt flat system, cocoa creek, australia, Mangroves and Salt Marshes, 2, 121, 10.1023/A:1009919411508 Santini, 2015, The use of fresh and saline water sources by the mangrove avicennia marina, Hydrobiologia, 745, 59, 10.1007/s10750-014-2091-2 Schulz, 2017, Improving large-scale groundwater models by considering fossil gradients, Adv Water Resour, 103, 32, 10.1016/j.advwatres.2017.02.010 Schwendenmann, 2006, Solute dynamics in a north brazilian mangrove : the influence of sediment permeability and freshwater input, Wetlands Ecol. Manage., 463, 10.1007/s11273-006-0008-1 Semeniuk, 1983, Mangrove distribution in northwestern australia in relationship to regional and local freshwater seepage, Vegetatio, 53, 10.1007/BF00039767 Semeniuk, 1993, The mangrove systems of western australia: 1993 presidential address, J R Soc West Aust Shaltout, 2020, Evaluation of the carbon sequestration capacity of arid mangroves along nutrient availability and salinity gradients along the red sea coastline of saudi arabia, Oceanologia, 62, 56, 10.1016/j.oceano.2019.08.002 Sherman, 2003, Spatial patterns of biomass and aboveground net primary productivity in a mangrove ecosystem in the dominican republic, JSTOR, 6, 384 Simard, 2019, Mangrove canopy height globally related to precipitation, temperature and cyclone frequency, Nat Geosci, 12, 40, 10.1038/s41561-018-0279-1 Tomlinson, 1986 Vovides, 2018, Change in drivers of mangrove crown displacement along a salinity stress gradient, Funct Ecol, 32, 2753, 10.1111/1365-2435.13218 Walther, 2014, Assessing the saltwater remediation potential of a three-dimensional, heterogeneous, coastal aquifer system, Environ Earth Sci, 72, 3827, 10.1007/s12665-014-3253-2 Walther, 2012, Saltwater intrusion modeling: verification and application to an agricultural coastal arid region in oman, J Comput Appl Math, 236, 4798, 10.1016/j.cam.2012.02.008 Watson, 1928, Mangrove forests of the malay peninsula, Malayan Forest Records, 6 Wendelberger, 2017, Halophytes can salinize soil when competing with glycophytes, intensifying effects of sea level rise in coastal communities, Oecologia, 184, 729, 10.1007/s00442-017-3896-2