Minimum information about a microarray experiment (MIAME)—toward standards for microarray data

Nature Genetics - Tập 29 Số 4 - Trang 365-371 - 2001
Alvis Brāzma1, Pascal Hingamp2, John Quackenbush3, Gavin Sherlock4, Paul T. Spellman5, C. J. Stoeckert6, John Aach7, Wilhelm Ansorge8, Catherine A. Ball4, Helen C. Causton9, Terry Gaasterland10, Patrick Glenisson11, Frank C. P. Holstege12, Irene F. Kim4, Victor Markowitz13, John C. Matese4, Helen Parkinson1, Alan J. Robinson1, Uğis Sarkans1, Steffen Schulze-Kremer14, Jason Stewart15, Ronald C. Taylor16, Jaak Vilo1, Martin Vingron17
1European Bioinformatics Institute, EMBL outstation, Wellcome Trust Genome Campus, Hinxton, UK
2Centre d'Immunologie de Marseille Luminy (CIML TAGC) & Université de la Méditerranée, Marseille, France
3The Institute for Genomic Research (TIGR), Rockville, USA
4Stanford University Palo Alto, USA
5University of California Berkeley, Berkeley, USA
6University of Pennsylvania, Philadelphia, USA
7Department of Genetics, Harvard Medical School, Cambridge, USA
8European Molecular Biology Laboratory (EMBL), Heidelberg, Germany
9CSC/Imperial College School of Medicine Microarray Centre, London, UK
10Rockefeller Univ., New York, USA
11Katholieke Universiteit Leuven, Leuven, Belgium
12University Medical Center, Utrecht, The Netherlands
13GeneLogic Inc, Gaithersburg, USA
14RZDP German Genome Resource Center, Berlin, Germany
15Open Informatics, Albuquerque, USA
16Center for Computational Pharmacology, University of Colorado School of Medicine, Denver, USA
17Max Plank Institute for Molecular Genetics, Berlin, Germany

Tóm tắt

Từ khóa


Tài liệu tham khảo

The Chipping Forecast. Nature Genet. 21, 1–60 (1999).

Brown, P.O. & Botstein, D. Exploring the new world of the genome with DNA microarrays. Nature Genet. 21, 33–37 (1999).

Young, R. Biomedical discovery with DNA arrays. Cell 102, 9–16 (2000).

Lockhart, D. & Winzeler, E. Genomics, gene expression and DNA arrays. Nature 405, 827–836 (2000).

Aach, J., Rindone, W. & Church, G.M. Systematic management and analysis of yeast gene expression data. Genome Res. 10, 431–445 (2000).

Quackenbush, J. Computational analysis of microarray data, Nature Rev. Genet. 2, 418–427 (2001).

Sherlock, G. et al. The Stanford Microarray Database. Nucleic Acids Res. 29, 152–155 (2001).

Brazma, A., Robinson, A., Cameron, G. & Ashburner M., One-stop shop for microarray data. Nature 403, 699–700 (2000).

Editorial. Free and public expression. Nature 410, 851 (2001).

Bassett, D.E., Eisen, M.B. & Boguski, M.B. Gene expression informatics—it's all in your mine. Nature Genet. 21, 51–55 (1999).

Kerr, M.K. & Churchill G.A., Experimental design for gene expression microarrays. Biostatistics 2, 183–201 (2001).

The Governing Council of the Organization for Human Brain Mapping (OHBM). Neuoroimaging databases. Science 292, 1673–1676 (2001).