Metabolic engineering to enhance heterologous production of hyaluronic acid in Bacillus subtilis
Tài liệu tham khảo
Bitter, 1962, A modified uronic acid carbazole reaction, Anal. Biochem., 4, 330, 10.1016/0003-2697(62)90095-7
Chen, 2009, Hyaluronan molecular weight is controlled by UDP-N-acetylglucosamine concentration in Streptococcus zooepidemicus, J. Biol. Chem., 284, 18007, 10.1074/jbc.M109.011999
Cheng, 2017, Enhanced biosynthesis of hyaluronic acid using engineered Corynebacterium glutamicum via metabolic pathway regulation, Biotechnol. J., 12
Chien, 2007, Enhanced hyaluronic acid production in Bacillus subtilis by coexpressing bacterial hemoglobin, Biotechnol. Prog., 23, 1017
Chien, 2007, Hyaluronic acid production by recombinant Lactococcus lactis, Appl. Microbiol. Biotechnol., 77, 339, 10.1007/s00253-007-1153-z
Collins, 2007, Mechanism of mRNA destabilization by the glmS ribozyme, Genes Dev., 21, 3356, 10.1101/gad.1605307
Cowman, 2011, Improved agarose gel electrophoresis method and molecular mass calculation for high molecular mass hyaluronan, Anal. Biochem., 417, 50, 10.1016/j.ab.2011.05.023
Desai, 1999, Antisense RNA strategies for metabolic engineering of Clostridium acetobutylicum, Appl. Environ. Microbiol., 65, 936, 10.1128/AEM.65.3.936-945.1999
Fischer, 2005, Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism, Nat. Genet., 37, 636, 10.1038/ng1555
Gaugué, 2013, The use of amino sugars by Bacillus subtilis: presence of a unique operon for the catabolism of glucosamine, PLoS One, 8, e63025, 10.1371/journal.pone.0063025
Goa, 1994, Hyaluronic acid, Drugs, 47, 536, 10.2165/00003495-199447030-00009
Gombert, 2001, Network identification and flux quantification in the central metabolism of Saccharomyces cerevisiae under different conditions of glucose repression, J. Bacteriol., 183, 1441, 10.1128/JB.183.4.1441-1451.2001
Harwood, 1990
Huang, 2006, The role of dissolved oxygen and function of agitation in hyaluronic acid fermentation, Biochem. Eng. J., 32, 239, 10.1016/j.bej.2006.10.011
Inácio, 2003, Distinct molecular mechanisms involved in carbon catabolite repression of the arabinose regulon in Bacillus subtilis, Microbiology, 149, 2345, 10.1099/mic.0.26326-0
Jagannath, 2010, Influence of competing metabolic processes on the molecular weight of hyaluronic acid synthesized by Streptococcus zooepidemicus, Biochem. Eng. J., 48, 148, 10.1016/j.bej.2009.09.003
Jia, 2013, Metabolic engineering of Bacillus subtilis for the efficient biosynthesis of uniform hyaluronic acid with controlled molecular weights, Bioresour. Technol., 132, 427, 10.1016/j.biortech.2012.12.150
Jin, 2016, Production of specific-molecular-weight hyaluronan by metabolically engineered Bacillus subtilis 168, Metab. Eng., 35, 21, 10.1016/j.ymben.2016.01.008
Keasling, 2010, Manufacturing molecules through metabolic engineering, Science, 330, 1355, 10.1126/science.1193990
Kobayashi, 2003, Essential Bacillus subtilis genes, Proc. Natl. Acad. Sci. USA, 100, 4678, 10.1073/pnas.0730515100
Kogan, 2007, Hyaluronic acid: a natural biopolymer with a broad range of biomedical and industrial applications, Biotechnol. Lett., 29, 17, 10.1007/s10529-006-9219-z
Krispin, 1998, The Bacillus subtilis AraE protein displays a broad substrate specificity for several different sugars, J. Bacteriol., 180, 3250, 10.1128/JB.180.12.3250-3252.1998
Larson, 2013, CRISPR interference (CRISPRi) for sequence-specific control of gene expression, Nat. Protoc., 8, 2180, 10.1038/nprot.2013.132
Lee, 2012, Systems metabolic engineering of microorganisms for natural and non-natural chemicals, Nat. Chem. Biol., 8, 536, 10.1038/nchembio.970
Li, 2012, Rational improvement of the engineered isobutanol-producing Bacillus subtilis by elementary mode analysis, Microb. Cell Factor., 11, 101, 10.1186/1475-2859-11-101
Liu, 2011, Microbial production of hyaluronic acid: current state, challenges, and perspectives, Microb. Cell Factor., 10, 99, 10.1186/1475-2859-10-99
Mao, 2007, Recombinant synthesis of hyaluronan by Agrobacterium sp, Biotechnol. Prog., 23, 1038
Mao, 2009, A recombinant E. coli bioprocess for hyaluronan synthesis, Appl. Microbiol. Biotechnol., 84, 63, 10.1007/s00253-009-1963-2
Nguyen, 2007, Expression vectors for the rapid purification of recombinant proteins in Bacillus subtilis, Curr. Microbiol., 55, 89, 10.1007/s00284-006-0419-5
Phan, 2012, Development of a strong intracellular expression system for Bacillus subtilis by optimizing promoter elements, J. Biotechnol., 157, 167, 10.1016/j.jbiotec.2011.10.006
Prasad, 2010, Hyaluronic acid production is enhanced by the additional co-expression of UDP-glucose pyrophosphorylase in Lactococcus lactis, Appl. Microbiol. Biotechnol., 86, 273, 10.1007/s00253-009-2293-0
Qi, 2013, Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression, Cell, 152, 1173, 10.1016/j.cell.2013.02.022
Renna, 1993, Regulation of the Bacillus subtilis alsS, alsD, and alsR genes involved in post-exponential-phase production of acetoin, J. Bacteriol., 175, 3863, 10.1128/JB.175.12.3863-3875.1993
Ruijter, 2009, Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data, Nucleic Acids Res., 37, e45, 10.1093/nar/gkp045
Sá-Nogueira, 1997, Cloning, functional analysis, and transcriptional regulation of the Bacillus subtilis araE gene involved in L-arabinose utilization, J. Bacteriol., 179, 7705, 10.1128/JB.179.24.7705-7711.1997
Sambrook, 2001
Schallmey, 2004, Developments in the use of Bacillus species for industrial production, Can. J. Microbiol., 50, 1, 10.1139/w03-076
Schneider, 2012, NIH Image to ImageJ: 25 years of image analysis, Nat. Methods, 9, 671, 10.1038/nmeth.2089
Tlapak-Simmons, 1999, Kinetic characterization of the recombinant hyaluronan synthases from Streptococcus pyogenes and Streptococcus equisimilis, J. Biol. Chem., 274, 4246, 10.1074/jbc.274.7.4246
Weigel, 2012, Hyaluronan synthase polymerizing activity and control of product size are discrete enzyme functions that can be uncoupled by mutagenesis of conserved cysteines, Glycobiology, 22, 1302, 10.1093/glycob/cws102
Weigel, 1997, Hyaluronan synthases, J. Biol. Chem., 272, 13997, 10.1074/jbc.272.22.13997
Weissmann, 1954, The structure of hyalobiuronic acid and of hyaluronic acid from umbilical Cord1, 2, J. Am. Chem. Soc., 76, 1753, 10.1021/ja01636a010
Westbrook, 2016, Development of a CRISPR-Cas9 tool kit for comprehensive engineering of Bacillus subtilis, Appl. Environ. Microbiol., 82, 4876, 10.1128/AEM.01159-16
Westbrook, 2018, Engineering of cell membrane to enhance heterologous production of hyaluronic acid in Bacillus subtilis, Biotechnol. Bioeng., 115, 216, 10.1002/bit.26459
Westbrook, 2018, Application of hydrocarbon and perfluorocarbon oxygen vectors to enhance heterologous production of hyaluronic acid in engineered Bacillus subtilis, Biotechnol. Bioeng.
Widner, 2005, Hyaluronic acid production in Bacillus subtilis, Appl. Environ. Microbiol., 71, 3747, 10.1128/AEM.71.7.3747-3752.2005
Wittmann, 2005, Metabolic flux analysis in Corynebacterium glutamicum, 277
Wolf, 1995, Genes encoding xylan and β-glucan hydrolysing enzymes in Bacillus subtilis: characterization, mapping and construction of strains deficient in lichenase, cellulase and xylanase, Microbiology, 141, 281, 10.1099/13500872-141-2-281
Yoshimura, 2015, Heterologous production of hyaluronic acid in an ε-poly-L-lysine producer, Streptomyces albulus, Appl. Environ. Microbiol., 81, 3631, 10.1128/AEM.00269-15
Yu, 2008, Metabolic engineering of Escherichia coli for biosynthesis of hyaluronic acid, Metab. Eng., 10, 24, 10.1016/j.ymben.2007.09.001