Lipids in photosystem II: Multifunctional cofactors

Jan Kern1, Albert Guskov2
1Institut für Chemie/Max Volmer Laboratorium für Biophysikalische Chemie, Technische Universität Berlin, Strasse des 17. Juni 135, D-10623 Berlin, Germany
2Institut für Chemie und Biochemie/Kristallographie, Freie Universität Berlin, Takustr. 6, D-14195 Berlin, Germany

Tài liệu tham khảo

Guskov, 2009, Cyanobacterial photosystem II at 2.9-angstrom resolution and the role of quinones, lipids, channels and chloride, Nat. Struct. Mol. Biol., 16, 334, 10.1038/nsmb.1559 Wydrzynski, 2005, Photosystem II: the light-driven water:plastoquinone oxidoreductase Kern, 2007, Photosystem II: structure and mechanism of the water:plastoquinone oxidoreductase, Photosynth. Res., 94, 183, 10.1007/s11120-007-9201-1 Barber, 2006, Photosystem II: an enzyme of global significance, Biochem. Soc. Trans., 34, 619, 10.1042/BST0340619 Michel, 1986, Pigment–protein interactions in the photosynthetic reaction centre from Rhodopseudomonas viridis, EMBO J., 5, 2445, 10.1002/j.1460-2075.1986.tb04520.x Loll, 2005, The antenna system of photosystem II from Thermosynechococcus elongatus at 3.2 angstrom resolution, Photosynth. Res., 86, 175, 10.1007/s11120-005-4117-0 Müh, 2008, Crystal structure of cyanobacterial photosystem II at 3.0Å resolution: a closer look at the antenna system and the small membrane-intrinsic subunits, Plant Physiol. Biochem., 46, 238, 10.1016/j.plaphy.2008.01.003 Jordan, 2001, Three-dimensional structure of cyanobacterial photosystem I at 2.5Å resolution, Nature, 411, 909, 10.1038/35082000 Roose, 2007, The PsbQ protein defines cyanobacterial photosystem II complexes with highest activity and stability, Proc. Natl. Acad. Sci. USA, 104, 2548, 10.1073/pnas.0609337104 Michoux, 2010, Structure of CyanoP at 2.8 angstrom: implications for the evolution and function of the PsbP subunit of photosystem II, Biochemistry, 49, 7411, 10.1021/bi1011145 Jackson, 2010, Crystal structure of PsbQ from Synechocystis sp. PCC 6803 at 1.8Å: implications for binding and function in cyanobacterial photosystem II, Biochemistry, 49, 2765, 10.1021/bi100217h Nixon, 2010, Recent advances in understanding the assembly and repair of photosystem II, Ann. Bot., 106, 1, 10.1093/aob/mcq059 Wei, 2010, LPA19, a Psb27 homolog in Arabidopsis thaliana, facilitates D1 protein precursor processing during PSII biogenesis, J. Biol. Chem., 285, 21391, 10.1074/jbc.M110.105064 Mabbitt, 2009, Solution structure of Psb27 from cyanobacterial photosystem II, Biochemistry, 48, 8771, 10.1021/bi901309c Cormann, 2009, Structure of Psb27 in solution: implications for transient binding to photosystem II during biogenesis and repair, Biochemistry, 48, 8768, 10.1021/bi9012726 Renger, 2007, Oxidative photosynthetic water splitting: energetics, kinetics and mechanism, Photosynth. Res., 92, 407, 10.1007/s11120-007-9185-x Brudvig, 2008, Water oxidation chemistry of photosystem II, Philos. Trans. Roy. Soc. Lond. B Biol. Sci., 363, 1211, 10.1098/rstb.2007.2217 Loll, 2005, Towards complete cofactor arrangement in the 3.0Å resolution structure of photosystem II, Nature, 438, 1040, 10.1038/nature04224 Murray, 2008, X-ray crystallography identifies two chloride binding sites in the oxygen evolving centre of photosystem II, Energy Environ. Sci., 1, 161, 10.1039/b810067p Kawakami, 2009, Location of chloride and its possible functions in oxygen-evolving photosystem II revealed by X-ray crystallography, Proc. Natl. Acad. Sci. USA, 106, 8567, 10.1073/pnas.0812797106 Ishikita, 2005, Energetics of proton transfer pathways in reaction centers from Rhodobacter sphaeroides. The Glu-H173 activated mutants, J. Biol. Chem., 280, 12446, 10.1074/jbc.M413531200 Murray, 2007, Structural characteristics of channels and pathways in photosystem II including the identification of an oxygen channel, J. Struct. Biol., 159, 228, 10.1016/j.jsb.2007.01.016 Ho, 2008, Access channels and methanol binding site to the CaMn4 cluster in photosystem II based on solvent accessibility simulations, with implications for substrate water access, Biochim. Biophys. Acta, 1777, 140, 10.1016/j.bbabio.2007.08.009 Ho, 2008, Uncovering channels in photosystem II by computer modelling: current progress, future prospects, and lessons from analogous systems, Photosynth. Res., 98, 503, 10.1007/s11120-008-9358-2 Gabdulkhakov, 2009, Probing the accessibility of the Mn4Ca cluster in photosystem II: channels calculation, noble gas derivatization, and cocrystallization with DMSO, Structure, 17, 1223, 10.1016/j.str.2009.07.010 Vassiliev, 2010, Tracking the flow of water through photosystem II using molecular dynamics and streamline tracing, Biochemistry, 49, 1873, 10.1021/bi901900s Stroebel, 2003, An atypical haem in the cytochrome b6f complex, Nature, 426, 413, 10.1038/nature02155 Yamashita, 2007, Structure of the cytochrome b6f complex: quinone analogue inhibitors as ligands of heme cn, J. Mol. Biol., 370, 39, 10.1016/j.jmb.2007.04.011 Liu, 2004, Crystal structure of spinach major light-harvesting complex at 2.72Å resolution, Nature, 428, 287, 10.1038/nature02373 Standfuss, 2005, Mechanisms of photoprotection and nonphotochemical quenching in pea light-harvesting complex at 2.5Å resolution, EMBO J., 24, 919, 10.1038/sj.emboj.7600585 Kern, 2009, Lipids in the structure of photosystem I, photosystem II and the cytochrome b6f complex, 203 Loll, 2007, Lipids in photosystem II: interactions with protein and cofactors, Biochim. Biophys. Acta, 1767, 509, 10.1016/j.bbabio.2006.12.009 Sakurai, 2006, Lipids in oxygen-evolving photosystem II complexes of cyanobacteria and higher plants, J. Biochem. (Tokyo), 140, 201, 10.1093/jb/mvj141 Jones, 2007, Lipids in photosynthetic reaction centres: structural roles and functional holes, Prog. Lipid Res., 46, 56, 10.1016/j.plipres.2006.06.001 Kern, 2005, Purification, characterisation and crystallisation of photosystem II from Thermosynechococcus elongatus cultivated in a new type of photobioreactor, Biochim. Biophys. Acta, 1706, 147, 10.1016/j.bbabio.2004.10.007 Ohno, 1986, Chemical composition of purified oxygen-evolving complexes from the thermophilic cyanobacterium Synechococcus sp, Biochim. Biophys. Acta, 852, 1, 10.1016/0005-2728(86)90049-6 Leng, 2008, Effects of phospholipase and lipase treatments on photosystem II core dimer from a thermophilic cyanobacterium, Photosynth. Res., 98, 469, 10.1007/s11120-008-9335-9 Sato, 2009, Lipid biosynthesis and its regulation in cyanobacteria, 157 Allakhverdiev, 2001, Unsaturated fatty acids in membrane lipids protect the photosynthetic machinery against salt-induced damage in Synechococcus, Plant Physiol., 125, 1842, 10.1104/pp.125.4.1842 Allakhverdiev, 1999, Genetic engineering of the unsaturation of fatty acids in membrane lipids alters the tolerance of Synechocystis to salt stress, Proc. Natl. Acad. Sci. USA, 96, 5862, 10.1073/pnas.96.10.5862 Allakhverdiev, 2009, Regulatory roles of unsaturated fatty acids in membrane lipids, 373 Broser, 2010, Crystal structure of monomeric photosystem II from Thermosynechococcus elongatus at 3.6-angstrom resolution, J. Biol. Chem., 285, 26255, 10.1074/jbc.M110.127589 Gurezka, 1999, A heptad motif of leucine residues found in membrane proteins can drive self-assembly of artificial transmembrane segments, J. Biol. Chem., 274, 9265, 10.1074/jbc.274.14.9265 Vass, 2008, Photoinhibition of photosynthetic electron transport, 393 Rokka, 2005, Synthesis and assembly of thylakoid protein complexes. Multiple assembly steps of photosystem II, Biochem. J., 388, 159, 10.1042/BJ20042098 Baena-Gonzalez, 2002, Biogenesis, assembly and turnover of photosystem II units, Philos. Trans. Roy. Soc. Lond. B Biol. Sci., 357, 1451, 10.1098/rstb.2002.1141 Krieger-Liszkay, 2005, Singlet oxygen production in photosynthesis, J. Exp. Bot., 56, 337, 10.1093/jxb/erh237 Barbato, 1992, Structural-changes and lateral redistribution of photosystem-II during donor side photoinhibition of thylakoids, J. Cell Biol., 119, 325, 10.1083/jcb.119.2.325 Kruse, 2000, Phosphatidylglycerol is involved in the dimerization of photosystem II, J. Biol. Chem., 275, 6509, 10.1074/jbc.275.9.6509 Gombos, 2002, Phosphatidylglycerol requirement for the function of electron acceptor plastoquinone Q(B) in the photosystem II reaction center, Biochemistry, 41, 3796, 10.1021/bi011884h Laczkó-Dobos, 2008, Role of phosphatidylglycerol in the function and assembly of photosystem II reaction center, studied in a cdsA-inactivated PAL mutant strain of Synechocystis sp. PCC6803 that lacks phycobilisomes, Biochim. Biophys. Acta, 1777, 1184, 10.1016/j.bbabio.2008.06.003 Bogos, 2010, Phosphatidylglycerol depletion affects photosystem II activity in Synechococcus sp PCC 7942 cells, Photosynth. Res., 103, 19, 10.1007/s11120-009-9497-0 Kruse, 1995, The role of phosphatidylglycerol as a functional effector and membrane anchor of the D1-core peptide from photosystem II-particles of the cyanobacterium Oscillatoria chalybea, Z. Naturforsch., 50c, 380, 10.1515/znc-1995-5-608 Pineau, 2004, A single mutation that causes phosphatidylglycerol deficiency impairs synthesis of photosystem II cores in Chlamydomonas reinhardtii, Eur. J. Biochem., 271, 329, 10.1046/j.1432-1033.2003.03931.x Loll, 2007, Lipids in photosystem II: interactions with protein and cofactors, Biochim. Biophys. Acta, 1767, 509, 10.1016/j.bbabio.2006.12.009 Reifarth, 1997, Modification of the water oxidizing complex in leaves of the dgd1 mutant of Arabidopsis thaliana deficient in the galactolipid digalactosyldiacylglycerol, Biochemistry, 36, 11769, 10.1021/bi9709654 Steffen, 2005, Investigations on the reaction pattern of photosystem II in leaves from Arabidopsis thaliana wild type plants and mutants with genetically modified lipid content, Biochemistry, 44, 3134, 10.1021/bi048465f Sakurai, 2007, Digalactosyldiacylglycerol is required for stabilization of the oxygen-evolving complex in photosystem II, Plant Physiol., 145, 1361, 10.1104/pp.107.106781 Doermann, 2009, The role of glycolipids in photosynthesis, 265 Wada, 2007, The essential role of phosphatidylglycerol in photosynthesis, Photosynth. Res., 92, 205, 10.1007/s11120-007-9203-z Wada, 2009, The role of phosphatidylglycerol in photosynthesis, 243 Domonkos, 2008, Lipid-assisted protein–protein interactions that support photosynthetic and other cellular activities, Prog. Lipid Res., 47, 422, 10.1016/j.plipres.2008.05.003 Minoda, 2003, Decrease in the efficiency of the electron donation to tyrosine Z of photosystem II in an SQDG-deficient mutant of Chlamydomonas, FEBS Lett., 553, 109, 10.1016/S0014-5793(03)00981-5 Krivanek, 2007, Spare quinones in the QB cavity of crystallized photosystem II from Thermosynechococcus elongatus, Biochim. Biophys. Acta, 1767, 520, 10.1016/j.bbabio.2007.02.013 Hauss, 2005, Localization of coenzyme Q10 in the center of a deuterated lipid membrane by neutron diffraction, Biochim. Biophys. Acta, 1710, 57, 10.1016/j.bbabio.2005.08.007 Di Bernardo, 1998, A high diffusion coefficient for coenzyme Q(10) might be related to a folded structure, FEBS Lett., 426, 77, 10.1016/S0014-5793(98)00313-5 Kaminskaya, 2007, Evidence for a novel quinone-binding site in the photosystem II (PS II) complex that regulates the redox potential of cytochrome b559, Biochemistry, 46, 1091, 10.1021/bi0613022 Bondarava, 2003, Evidence that cytochrome b559 mediates the oxidation of reduced plastoquinone in the dark, J. Biol. Chem., 278, 13554, 10.1074/jbc.M212842200 Kruk, 2008, Plastoquinol as a singlet oxygen scavenger in photosystem II, Biochim. Biophys. Acta, 1777, 154, 10.1016/j.bbabio.2007.10.008 Ligeza, 1998, Oxygen permeability of thylakoid membranes: electron paramagnetic resonance spin labeling study, Biochim. Biophys. Acta, 1365, 453, 10.1016/S0005-2728(98)00098-X Subczynski, 2000, Physical properties of lipid bilayer membranes: relevance to membrane biological functions, Acta Biochim. Pol., 47, 613, 10.18388/abp.2000_3983 Marsh, 2006, Lipid conformation in crystalline bilayers and in crystals of transmembrane proteins, Chem. Phys. Lipids, 141, 48, 10.1016/j.chemphyslip.2006.02.005 Prange, 1998, Exploring hydrophobic sites in proteins with xenon or krypton, Proteins, 30, 61, 10.1002/(SICI)1097-0134(19980101)30:1<61::AID-PROT6>3.0.CO;2-N Svensson-Ek, 2002, The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides, J. Mol. Biol., 321, 329, 10.1016/S0022-2836(02)00619-8 Luna, 2008, Crystallographic studies of Xe and Kr binding within the large internal cavity of cytochrome ba3 from Thermus thermophilus: structural analysis and role of oxygen transport channels in the heme-Cu oxidases, Biochemistry, 47, 4657, 10.1021/bi800045y Murray, 2008, Analysis of xenon binding to photosystem II by X-ray crystallography, Photosynth. Res., 98, 523, 10.1007/s11120-008-9366-2