Linking N2O emission from biochar-amended composting process to the abundance of denitrify (nirK and nosZ) bacteria community

Anderson CR, Hamonts K, Clough TJ, Condron LM. Biochar does not affect soil N-transformations or microbial community structure under ruminant urine patches but does alter relative proportions of nitrogen cycling bacteria. Agric Ecosyst Environ. 2014;191:63–72.

Angnes G, Nicoloso RS, da Silva ML, de Oliveira PA, Higarashi MM, Mezzari MP, Miller PR. Correlating denitrifying catabolic genes with N2O and N2 emissions from swine slurry composting. Bioresour Technol. 2013;140:368–75.

Bai SH, Reverchon F, Xu CY, Xu Z, Blumfield TJ, Zhao H, Van Zwieten L, Wallace HM. Wood biochar increases nitrogen retention in field settings mainly through abiotic processes. Soil Biol Biochem. 2015;90:232–40.

Bernal MP, Alburquerque JA, Moral R. Composting of animal manures and chemical criteria for compost maturity assessment. Rev Bioresour Technol. 2009;100:5444–53.

Bothe H, Jost G, Schloter M, Ward BB, Witzel K. Molecular analysis of ammonia oxidation and denitrification in natural environments. FEMS Microbiol Rev. 2000;24:673–90.

Castaldi P, Garau G, Melis P. Maturity assessment of compost from municipal solid waste through the study of enzyme activities and water-soluble fractions. Waste Manag. 2008;28:534–40.

Chadwick D, Sommer S, Thorman R, Fangueiro D, Cardenas L, Amon B, Misselbrook T. Manure management: implications for greenhouse gas emissions. Anim Feed Sci Tech. 2011;166–167:514–31.

Chen R, Wang Y, Wei S, Wang W, Lin X. Windrow composting mitigated CH4 emissions: characterization of methanogenic and methanotrophic communities in manure management. FEMS Microbiol Ecol. 2014;90:575–86.

Clough TJ, Condron LM. Biochar and the nitrogen cycle: introduction. J Environ Qual. 2010;39:1218–23.

Czepiel P, Douglas E, Harriss R, Crill P. Measurements of N2O from composted organic wastes. Environ Sci Technol. 1996;30:2519–25.

Dias BO, Silva CA, Higashikawa FS, Roig A, Sánchez-Monedero MA. Use of biochar as bulking agent for the composting of poultry manure: effect on organic matter degradation and humification. Bioresour Technol. 2010;101:1239–46.

Henry S, Baudoin E, López-Gutiérrez JC, Martin-Laurent F, Brauman A, Philippot L. Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR. J Microbiol Methods. 2004;59:327–35.

Hou FS, Milke MW, Leung DW, Macpherson DJ. Variations in phytoremediation performance with diesel-contaminated soil. Environ Technol. 2001;22:215–22.

Hu HW, Chen D, He JZ. Microbial regulation of terrestrial nitrous oxide formation: understanding the biological pathways for prediction of emission rates. FEMS Microbiol Rev. 2015;39:729–49.

IPCC climate change. The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. 2013.

Kammann C, Ratering S, Eckhard C, Muller C. Biochar and hydrochar effects on greenhouse gas (carbon dioxide, nitrous oxide, and methane) fluxes from soils. J Environ Qual. 2012;41:1052–66.

Larney FJ, Hao X. A review of composting as a management alternative for beef cattle feedlot manure in southern Alberta, Canada. Bioresour Technol. 2007;98:3221–7.

Liu S, Ling Z, Liu Q, Zou J. Fe(III) fertilization mitigating net global warming potential and greenhouse gas intensity in paddy rice-wheat rotation systems in China. Environ Pollut. 2012;164:73–80.

Maeda K, Hanajima D, Toyoda S, Yoshida N, Morioka R, Osada T. Microbiology of nitrogen cycle in animal manure compost. Microb Biotechnol. 2011;4:700–9.

Morales SE, Cosart T, Holben WE. Bacterial gene abundances as indicators of greenhouse gas emission in soils. ISME J. 2010;4:799–808.

Mosier AR, Hutchinson GL. Nitrous oxide emissions from cropped fields. J Environ Qual. 1981;10:169–73.

Ogunwande GA, Osunade JA, Adekalu KO, Ogunjimi LAO. Nitrogen loss in chicken litter compost as affected by carbon to nitrogen ratio and turning frequency. Bioresour Technol. 2008;99:7495–503.

Ovideo J, Sanz JF. N2O Decomposition on TiO2 (110) from Dynamic First-Principles Calculations. J Phys Chem B. 2005;109:16223–6.

Owen JJ, Silver WL. Greenhouse gas emissions from dairy manure management: a review of field-based studies. Glob Chang Biol. 2015;21:550–65.

Pepe O, Ventorino V, Blaiotta G. Dynamic of functional microbial groups during mesophilic composting of agro-industrial wastes and free-living (N2)-fixing bacteria application. Waste Manag. 2013;33:1616–25.

Scala DJ, Kerkhof LJ. Nitrous oxide reductase (nosZ) gene-specific PCR primers for detection of denitrifiers and three nosZ genes from marine sediments. FEMS Microb Lett. 1998;162:61–8.

Sanchez-Monedero MA, Serramia N, Civantos CG, Fernandez-Hernandez A, Roig A. Greenhouse gas emissions during composting of two-phase olive mill wastes with different agroindustrial by-products. Chemosphere. 2010;81:18–25.

Spokas KA, Baker JM, Reicosky DC. Ethylene: potential key for biochar amendment impacts. Plant Soil. 2010;333:443–52.

Steiner C, Das KC, Melear N, Lakly D. Reducing nitrogen loss during poultry litter composting using biochar. J Environ Qual. 2010;39:1236–42.

Tsutsui H, Fujiwara T, Matsukawa K, Funamizu N. Nitrous oxide emission mechanisms during intermittently aerated composting of cattle manure. Bioresour Technol. 2013;141:205–11.

Wallenstein MD, Hall EK. A trait-based framework for predicting when and where microbial adaptation to climate change will affect ecosystem functioning. Biogeochemistry. 2011;109:35–47.

Wang C, Lu H, Dong D, Deng H, Strong PJ, Wang H, Wu W. Insight into the effects of biochar on manure composting: evidence supporting the relationship between N2O emission and denitrifying community. Environ Sci Technol. 2013;47:7341–9.

Yanai Y, Toyota K, Okazaki M. Effects of charcoal addition on N2O emissions from soil resulting from rewetting air-dried soil in short-term laboratory experiments. Soil Sci Plant Nutr. 2007;53:181–8.

Zhang A, Cui L, Pan G, Li L, Hussain Q, Zhang X, Zheng J, Crowley D. Effect of biochar amendment on yield and methane and nitrous oxide emissions from a rice paddy from Tai Lake plain, China. Agric Ecosyst Environ. 2010;139:469–75.

Zhang L, Zeng G, Zhang J, Chen Y, Yu M, Lu L, Li H, Zhu Y, Yuan Y, Huang A, He L. Response of denitrifying genes coding for nitrite (nirK or nirS) and nitrous oxide (nosZ) reductases to different physico-chemical parameters during agricultural waste composting. Appl Microbiol Biotechnol. 2015;99:4059–70.

Zhou J, Wu L, Deng Y, Zhi XY, Jiang YH, Tu QC, Xie JP, Norstrand JDV, He ZL, Yang YF. Reproducibility and quantitation of amplicon sequencing-based detection. ISME J. 2011;5:1303–13.

Zou J, Huang Y, Jiang J, Zheng X, Sass RL. A 3-year field measurement of methane and nitrous oxide emissions from rice paddies in China: Effects of water regime, crop residue, and fertilizer application. Global Biogeochem Cycle. 2005;19:GB2021.