KDM6A Regulates Cell Plasticity and Pancreatic Cancer Progression by Noncanonical Activin Pathway

Zhujun Yi1,2, Shanqiao Wei3, Lin Jin1,2, Sivakumar Jeyarajan4, Jing Yang1, Yumei Gu1, Hong Sun Kim1, Shula Schechter1, Shuang Lu1,2, Michelle T. Paulsen5, Karan Bedi5, Ishwarya Venkata Narayanan5, Mats Ljungman5, Howard C. Crawford6, Marina Pasca di Magliano7,8, Kai Ge9, Yali Dou10, Jiaqi Shi1,8
1Department of Pathology & Clinical Labs, University of Michigan, Ann Arbor, Michigan
2Xiangya Hospital, Central South University, Changsha, Hunan, People’s Republic of China
3Proteios Technology, Seattle, Washington
4Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan
5Department of Radiation Oncology, Center for RNA Biomedicine, University of Michigan, Ann Arbor, Michigan
6Henry Ford Pancreatic Cancer Center, Detroit, Michigan
7Department of Surgery, University of Michigan, Ann Arbor, Michigan
8Rogel Cancer Center, University of Michigan, Ann Arbor, Michigan
9National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, Maryland
10Department of Medicine and Department of Biochemistry and Molecular Medicine, Keck School of Medicine, University of Southern California, Los Angeles, California

Tài liệu tham khảo

Mizrahi, 2020, Pancreatic cancer, Lancet, 395, 2008, 10.1016/S0140-6736(20)30974-0 Lippi, 2020, The global burden of pancreatic cancer, Arch Med Sci, 16, 820, 10.5114/aoms.2020.94845 Vakoc, 2017, Untangling the genetics from the epigenetics in pancreatic cancer metastasis, Nat Genet, 49, 323, 10.1038/ng.3798 Makohon-Moore, 2017, Limited heterogeneity of known driver gene mutations among the metastases of individual patients with pancreatic cancer, Nat Genet, 49, 358, 10.1038/ng.3764 Yachida, 2010, Distant metastasis occurs late during the genetic evolution of pancreatic cancer, Nature, 467, 1114, 10.1038/nature09515 Roe, 2017, Enhancer reprogramming promotes pancreatic cancer metastasis, Cell, 170, 875, 10.1016/j.cell.2017.07.007 Waddell, 2015, Whole genomes redefine the mutational landscape of pancreatic cancer, Nature, 518, 495, 10.1038/nature14169 Bailey, 2016, Genomic analyses identify molecular subtypes of pancreatic cancer, Nature, 531, 47, 10.1038/nature16965 Schulz, 2019, The histone demethylase UTX/KDM6A in cancer: progress and puzzles, Int J Cancer, 145, 614, 10.1002/ijc.32116 Ler, 2017, Loss of tumor suppressor KDM6A amplifies PRC2-regulated transcriptional repression in bladder cancer and can be targeted through inhibition of EZH2, Sci Transl Med, 9, eaai8312, 10.1126/scitranslmed.aai8312 Stief, 2020, Loss of KDM6A confers drug resistance in acute myeloid leukemia, Leukemia, 34, 50, 10.1038/s41375-019-0497-6 Taube, 2017, The H3K27me3-demethylase KDM6A is suppressed in breast cancer stem-like cells, and enables the resolution of bivalency during the mesenchymal-epithelial transition, Oncotarget, 8, 65548, 10.18632/oncotarget.19214 Soto, 2017, KDM6A addiction of cervical carcinoma cell lines is triggered by E7 and mediated by p21CIP1 suppression of replication stress, PLoS Pathog, 13, 10.1371/journal.ppat.1006661 Yu, 2019, GATA3 recruits UTX for gene transcriptional activation to suppress metastasis of breast cancer, Cell Death Dis, 10, 832, 10.1038/s41419-019-2062-7 Andricovich, 2018, Loss of KDM6A activates super-enhancers to induce gender-specific squamous-like pancreatic cancer and confers sensitivity to BET inhibitors, Cancer Cell, 33, 512, 10.1016/j.ccell.2018.02.003 Watanabe, 2019, Loss of KDM6A characterizes a poor prognostic subtype of human pancreatic cancer and potentiates HDAC inhibitor lethality, Int J Cancer, 145, 192, 10.1002/ijc.32072 Paulsen, 2014, Use of Bru-Seq and BruChase-Seq for genome-wide assessment of the synthesis and stability of RNA, Methods, 67, 45, 10.1016/j.ymeth.2013.08.015 Loomans, 2014, Intertwining of activin A and TGFβ signaling: dual roles in cancer progression and cancer cell invasion, Cancers (Basel), 7, 70, 10.3390/cancers7010070 Togashi, 2015, Activin signal promotes cancer progression and is involved in cachexia in a subset of pancreatic cancer, Cancer Lett, 356, 819, 10.1016/j.canlet.2014.10.037 Namwanje, 2016, Activins and inhibins: roles in development, physiology, and disease, Cold Spring Harb Perspect Biol, 8, a021881, 10.1101/cshperspect.a021881 Kawaguchi, 2002, The role of the transcriptional regulator Ptf1a in converting intestinal to pancreatic progenitors, Nat Genet, 32, 128, 10.1038/ng959 Tuveson, 2004, Endogenous oncogenic K-ras(G12D) stimulates proliferation and widespread neoplastic and developmental defects, Cancer Cell, 5, 375, 10.1016/S1535-6108(04)00085-6 Hingorani, 2003, Preinvasive and invasive ductal pancreatic cancer and its early detection in the mouse, Cancer Cell, 4, 437, 10.1016/S1535-6108(03)00309-X Hingorani, 2005, Trp53R172H and KrasG12D cooperate to promote chromosomal instability and widely metastatic pancreatic ductal adenocarcinoma in mice, Cancer Cell, 7, 469, 10.1016/j.ccr.2005.04.023 Yadav, 2013, The epidemiology of pancreatitis and pancreatic cancer, Gastroenterology, 144, 1252, 10.1053/j.gastro.2013.01.068 Guerra, 2007, Chronic pancreatitis is essential for induction of pancreatic ductal adenocarcinoma by K-Ras oncogenes in adult mice, Cancer Cell, 11, 291, 10.1016/j.ccr.2007.01.012 Azizi, 2021, Loss of activating transcription factor 3 prevents KRAS-mediated pancreatic cancer, Oncogene, 40, 3118, 10.1038/s41388-021-01771-z Massagué, 2012, TGFβ signalling in context, Nat Rev Mol Cell Biol, 13, 616, 10.1038/nrm3434 Antsiferova, 2012, The bright and the dark sides of activin in wound healing and cancer, J Cell Sci, 125, 3929 Wiater, 2012, Roles of activin family in pancreatic development and homeostasis, Mol Cell Endocrinol, 359, 23, 10.1016/j.mce.2012.02.015 Zhao, 2020, Oncogene-induced senescence limits the progression of pancreatic neoplasia through production of activin A, Cancer Res, 80, 3359, 10.1158/0008-5472.CAN-19-3763 Qiu, 2016, Loss of activin receptor type 1B accelerates development of intraductal papillary mucinous neoplasms in mice with activated KRAS, Gastroenterology, 150, 218, 10.1053/j.gastro.2015.09.013 Ding, 2017, Activin A induces skeletal muscle catabolism via p38β mitogen-activated protein kinase, J Cachexia Sarcopenia Muscle, 8, 202, 10.1002/jcsm.12145 Paajanen, 2020, Elevated circulating activin A levels in patients with malignant pleural mesothelioma are related to cancer cachexia and reduced response to platinum-based chemotherapy, Clin Lung Cancer, 21, e142, 10.1016/j.cllc.2019.10.013 Nguyen, 2016, Tumor infiltrating lymphocytes and survival in patients with head and neck squamous cell carcinoma, Head Neck, 38, 1074, 10.1002/hed.24406 Paulsen, 2013, Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response, Proc Natl Acad Sci U S A, 110, 2240, 10.1073/pnas.1219192110 Bedi, 2020, Characterization of novel primary miRNA transcription units in human cells using Bru-seq nascent RNA sequencing, NAR Genom Bioinform, 2, lqz014, 10.1093/nargab/lqz014 Kirkconnell, 2017, Gene length as a biological timer to establish temporal transcriptional regulation, Cell Cycle, 16, 259, 10.1080/15384101.2016.1234550 Perusina Lanfranca, 2020, Interleukin 22 signaling regulates acinar cell plasticity to promote pancreatic tumor development in mice, Gastroenterology, 158, 1417, 10.1053/j.gastro.2019.12.010 Ettel, 2019, Expression and prognostic value of NSD1 and SETD2 in pancreatic ductal adenocarcinoma and its precursor lesions, Pathology, 51, 392, 10.1016/j.pathol.2019.02.005 Crowe, 2019, Semi-quantitative determination of protein expression using immunohistochemistry staining and analysis: an integrated protocol, Bio Protoc, 9, e3465, 10.21769/BioProtoc.3465 Young, 2019, The loss of ATRX increases susceptibility to pancreatic injury and oncogenic KRAS in female but not male mice, Cell Mol Gastroenterol Hepatol, 7, 93, 10.1016/j.jcmgh.2018.09.004 Wang, 2012, UTX regulates mesoderm differentiation of embryonic stem cells independent of H3K27 demethylase activity, Proc Natl Acad Sci U S A, 109, 15324, 10.1073/pnas.1204166109 Jackson, 2001, Analysis of lung tumor initiation and progression using conditional expression of oncogenic K-ras, Genes Dev, 15, 3243, 10.1101/gad.943001 Olive, 2004, Mutant p53 gain of function in two mouse models of Li-Fraumeni syndrome, Cell, 119, 847, 10.1016/j.cell.2004.11.004