Jasmonate and Phytochrome A Signaling inArabidopsisWound and Shade Responses Are Integrated through JAZ1 Stability
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Abramoff, 2004, Image Processing with ImageJ, Biophotonics International, 11, 36
Ahmad, 1993, HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor, Nature, 366, 162, 10.1038/366162a0
Balbi, 2008, JA signalling network in Arabidopsis thaliana: Crucial regulatory nodes and new physiological scenarios, New Phytol., 177, 301, 10.1111/j.1469-8137.2007.02292.x
Ballaré, 2009, Illuminated behavior. Phytochrome as a key regulator of light foraging and plant anti-herbivore defense, Plant Cell Environ., 32, 713, 10.1111/j.1365-3040.2009.01958.x
Ballaré, 1990, Far-red radiation reflected from adjacent leaves: An early signal of competition in plant canopies, Science, 247, 329, 10.1126/science.247.4940.329
Barnes, 1996, Far-red light blocks greening of Arabidopsis seedlings via a phytochrome A-mediated change in plastid development, Plant Cell, 8, 601
Benedetti, 1995, COI1-dependent expression of an Arabidopsis vegetative storage protein in flowers and siliques and in response to coronatine or methyl JA, Plant Physiol., 109, 567, 10.1104/pp.109.2.567
Berger, 2002, Local and differential control of vegetative storage protein expression in response to herbivore damage in Arabidopsis thaliana, Physiol. Plant., 114, 85, 10.1046/j.0031-9317.2001.1140112.x
Berger, 1995, Arabidopsis thaliana Atvsp is homologous to soybean VspA and VspB, genes encoding vegetative storage protein acid phosphatases, and is regulated similarly by methyl JA, wounding, sugars, light and phosphate, Plant Mol. Biol., 27, 933, 10.1007/BF00037021
Boter, 2004, Conserved MYC transcription factors play a key role in JA signaling both in tomato and Arabidopsis, Genes Dev., 18, 1577, 10.1101/gad.297704
Bruggemann, 1996, Analysis of fast neutron-generated mutants at the Arabidopsis thaliana HY4 locus, Plant J., 10, 755, 10.1046/j.1365-313X.1996.10040755.x
Brüx, 2008, Reduced V-ATPase activity in the trans-Golgi network causes oxylipin-dependent hypocotyl growth inhibition in Arabidopsis, Plant Cell, 20, 1088, 10.1105/tpc.108.058362
Chen, 2007, Glutathione S-transferase interacting with far-red insensitive 219 is involved in phytochrome A-mediated signaling in Arabidopsis, Plant Physiol., 143, 1189, 10.1104/pp.106.094185
Chen, 2004, Light signal transduction in higher plants, Annu. Rev. Genet., 38, 87, 10.1146/annurev.genet.38.072902.092259
Chini, 2009, The ZIM domain mediates homo- and heteromeric interactions between Arabidopsis JAZ proteins, Plant J., 59, 77, 10.1111/j.1365-313X.2009.03852.x
Chini, 2007, The JAZ family of repressors is the missing link in JA signalling, Nature, 448, 666, 10.1038/nature06006
Cho, 2007, Survey of differentially expressed proteins and genes in jasmonic acid treated rice seedling shoot and root at the proteomics and transcriptomics levels, J. Proteome Res., 6, 3581, 10.1021/pr070358v
Chory, 1996, From seed germination to flowering, light controls plant development via the pigment phytochrome, Proc. Natl. Acad. Sci. USA, 93, 12066, 10.1073/pnas.93.22.12066
Chung, 2009, A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis, Plant Cell, 21, 131, 10.1105/tpc.108.064097
Chung, 2008, Regulation and function of Arabidopsis JA ZIM-domain genes in response to wounding and herbivory, Plant Physiol., 146, 952, 10.1104/pp.107.115691
Clarke, 2009, JAs act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana, New Phytol., 182, 175, 10.1111/j.1469-8137.2008.02735.x
Devlin, 1999, Phytochrome D acts in the shade-avoidance syndrome in Arabidopsis by controlling elongation growth and flowering time, Plant Physiol., 119, 909, 10.1104/pp.119.3.909
Devlin, 2003, A genomic analysis of the shade avoidance response in Arabidopsis, Plant Physiol., 133, 1617, 10.1104/pp.103.034397
Devoto, 2005, Expression profiling reveals COI1 to be a key regulator of genes involved in wound- and methyl JA-induced secondary metabolism, defence, and hormone interactions, Plant Mol. Biol., 58, 497, 10.1007/s11103-005-7306-5
Devoto, 2002, COI1 links JA signalling and fertility to the SCF ubiquitin-ligase complex in Arabidopsis, Plant J., 32, 457, 10.1046/j.1365-313X.2002.01432.x
Devoto, 2003, Regulation of JA-mediated plant responses in Arabidopsis, Ann. Bot. (Lond.), 92, 329, 10.1093/aob/mcg151
Dombrecht, 2007, MYC2 differentially modulates diverse JA-dependent functions in Arabidopsis, Plant Cell, 19, 2225, 10.1105/tpc.106.048017
Ellis, 2002, A conditionally fertile coi1 allele indicates cross-talk between plant hormone signalling pathways in Arabidopsis thaliana seeds and young seedlings, Planta, 215, 549, 10.1007/s00425-002-0787-4
Fairchild, 2000, HFR1 encodes an atypical bHLH protein that acts in phytochrome A signal transduction, Genes Dev., 14, 2377
Feys, 1994, Arabidopsis mutants selected for resistance to the phytotoxin coronatine are male-sterile, insensitive to methyl JA, and resistant to a bacterial pathogen, Plant Cell, 6, 751, 10.2307/3869877
Fonseca, 2009, (+)-7-Iso-jasmonoyl-L-isoleucine is the endogenous bioactive jasmonate, Nat. Chem. Biol., 5, 344, 10.1038/nchembio.161
Franklin, 2003, Phytochromes B, D, and E act redundantly to control multiple physiological responses in Arabidopsis, Plant Physiol., 131, 1340, 10.1104/pp.102.015487
Frenkel, 2009, Improper excess light energy dissipation in Arabidopsis results in a metabolic reprogramming, BMC Plant Biol., 9, 12, 10.1186/1471-2229-9-12
Genoud, 2002, Phytochrome signalling modulates the SA-perceptive pathway in Arabidopsis, Plant J., 31, 87, 10.1046/j.1365-313X.2002.01338.x
Glazebrook, 2005, Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens, Annu. Rev. Phytopathol., 43, 205, 10.1146/annurev.phyto.43.040204.135923
Goto, 1991, Flowering responses to light-breaks in photomorphogenic mutants of Arabidopsis thaliana, a long-day plant, Physiol. Plant., 83, 209, 10.1111/j.1399-3054.1991.tb02144.x
Griebel, 2008, Light regulation and daytime dependency of inducible plant defenses in Arabidopsis: Phytochrome signaling controls systemic acquired resistance rather than local defense, Plant Physiol., 147, 790, 10.1104/pp.108.119503
Grunewald, 2009, Expression of the Arabidopsis jasmonate signalling repressor JAZ1/TIFY10A is stimulated by auxin, EMBO Rep., 10, 923, 10.1038/embor.2009.103
Guranowski, 2007, Substrate specificity and products of side-reactions catalyzed by JA:amino acid synthetase (JAR1), FEBS Lett., 581, 815, 10.1016/j.febslet.2007.01.049
Haga, 2004, Phytochrome-mediated transcriptional up-regulation of ALLENE OXIDE SYNTHASE in rice seedlings, Plant Cell Physiol., 45, 119, 10.1093/pcp/pch025
He, 2002, Evidence supporting a role of jasmonic acid in Arabidopsis leaf senescence, Plant Physiol., 128, 876, 10.1104/pp.010843
Howe, 2008, Plant immunity to insect herbivores, Annu. Rev. Plant Biol., 59, 41, 10.1146/annurev.arplant.59.032607.092825
Hsieh, 2000, FIN219, an auxin-regulated gene, defines a link between phytochrome A and the downstream regulator COP1 in light control of Arabidopsis development, Genes Dev., 14, 1958
Izaguirre, 2006, Remote sensing of future competitors: Impacts on plant defenses, Proc. Natl. Acad. Sci. USA, 103, 7170, 10.1073/pnas.0509805103
Johnson, 1994, Photoresponses of light-grown phyA mutants of Arabidopsis (phytochrome A is required for the perception of daylength extensions), Plant Physiol., 105, 141, 10.1104/pp.105.1.141
Jung, 2007, Microarray-based screening of JA-responsive genes in Arabidopsis thaliana, Plant Cell Rep., 26, 1053, 10.1007/s00299-007-0311-1
Karlin-Neumann, 1988, Expression of light-harvesting chlorophyll a/b-protein genes is phytochrome-regulated in etiolated Arabidopsis thaliana seedlings, Plant Physiol., 88, 1323, 10.1104/pp.88.4.1323
Katsir, 2008, COI1 is a critical component of a receptor for JA and the bacterial virulence factor coronatine, Proc. Natl. Acad. Sci. USA, 105, 7100, 10.1073/pnas.0802332105
Keiller, 1989, Control of carbon partitioning by light quality mediated by phytochrome, Plant Sci., 63, 25, 10.1016/0168-9452(89)90097-6
Kloek, 2001, Resistance to Pseudomonas syringae conferred by an Arabidopsis thaliana coronatine-insensitive (coi1) mutation occurs through two distinct mechanisms, Plant J., 26, 509, 10.1046/j.1365-313x.2001.01050.x
Liu, 2005, Arabidopsis vegetative storage protein is an anti-insect acid phosphatase, Plant Physiol., 139, 1545, 10.1104/pp.105.066837
Lorenzo, 2004, JA-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different JA-regulated defense responses in Arabidopsis, Plant Cell, 16, 1938, 10.1105/tpc.022319
McCormac, 1993, Photoresponses of transgenic Arabidopsis seedlings expressing introduced phytochrome B-encoding cDNAs: Evidence that phytochrome A and phytochrome B have distinct photoregulatory functions, Plant J., 4, 19, 10.1046/j.1365-313X.1993.04010019.x
Melotto, 2008, A critical role of two positively charged amino acids in the Jas motif of Arabidopsis JAZ proteins in mediating coronatine- and jasmonoyl isoleucine-dependent interactions with the COI1 F-box protein, Plant J., 55, 979, 10.1111/j.1365-313X.2008.03566.x
Miersch, 2008, Hydroxylated JAs are commonly occurring metabolites of jasmonic acid and contribute to a partial switch-off in JA signaling, New Phytol., 177, 114, 10.1111/j.1469-8137.2007.02252.x
Moreno, 2009, Ecological modulation of plant defense via phytochrome control of JA sensitivity, Proc. Natl. Acad. Sci. USA, 106, 4935, 10.1073/pnas.0900701106
Mueller, 1993, Signaling in the elicitation process is mediated through the octadecanoid pathway leading to jasmonic acid, Proc. Natl. Acad. Sci. USA, 90, 7490, 10.1073/pnas.90.16.7490
Nagatani, 1991, Phytochrome B is not detectable in the hy3 mutant of Arabidopsis, which is deficient in responding to end-of-day far-red light treatments, Plant Cell Physiol., 32, 1119, 10.1093/oxfordjournals.pcp.a078177
Neff, 1998, Genetic interactions between phytochrome A, phytochrome B, and cryptochrome 1 during Arabidopsis development, Plant Physiol., 118, 27, 10.1104/pp.118.1.27
Park, 2002, A knock-out mutation in allene oxide synthase results in male sterility and defective wound signal transduction in Arabidopsis due to a block in jasmonic acid biosynthesis, Plant J., 31, 1, 10.1046/j.1365-313X.2002.01328.x
Pauwels, 2008, Mapping methyl JA-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells, Proc. Natl. Acad. Sci. USA, 105, 1380, 10.1073/pnas.0711203105
Porra, 1989, Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: Verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim. Biophys. Acta, 975, 384
Rao, 2000, Jasmonic acid signaling modulates ozone-induced hypersensitive cell death, Plant Cell, 12, 1633, 10.1105/tpc.12.9.1633
Reed, 1994, Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development, Plant Physiol., 104, 1139, 10.1104/pp.104.4.1139
Reinbothe, 1993, Methyl JA-regulated translation of nuclear-encoded chloroplast proteins in barley (Hordeum vulgare L. cv. salome), J. Biol. Chem., 268, 10606, 10.1016/S0021-9258(18)82241-4
Reinbothe, 2009, Plant oxylipins: Role of jasmonic acid during programmed cell death, defence and leaf senescence, FEBS J., 276, 4666, 10.1111/j.1742-4658.2009.07193.x
Riemann, 2009, Phytochrome A requires JA for photodestruction, Planta, 229, 1035, 10.1007/s00425-009-0891-9
Riemann, 2003, Impaired induction of the JA pathway in the rice mutant hebiba, Plant Physiol., 133, 1820, 10.1104/pp.103.027490
Riemann, 2008, Rice JA RESISTANT 1 is involved in phytochrome and JA signalling, Plant Cell Environ., 31, 783, 10.1111/j.1365-3040.2008.01790.x
Runge, 1996, Distinct roles for light-dependent NADPH:protochlorophyllide oxidoreductases (POR) A and B during greening in higher plants, Plant J., 9, 513, 10.1046/j.1365-313X.1996.09040513.x
Salter, 2003, Gating of the rapid shade-avoidance response by the circadian clock in plants, Nature, 426, 680, 10.1038/nature02174
Sasaki, 2001, Monitoring of methyl JA-responsive genes in Arabidopsis by cDNA macroarray: Self-activation of jasmonic acid biosynthesis and crosstalk with other phytohormone signaling pathways, DNA Res., 8, 153, 10.1093/dnares/8.4.153
Sessa, 2005, A dynamic balance between gene activation and repression regulates the shade avoidance response in Arabidopsis, Genes Dev., 19, 2811, 10.1101/gad.364005
Shikata, 2004, Characterization of Arabidopsis ZIM, a member of a novel plant-specific GATA factor gene family, J. Exp. Bot., 55, 631, 10.1093/jxb/erh078
Shinomura, 2000, Elementary processes of photoperception by phytochrome A for high-irradiance response of hypocotyl elongation in Arabidopsis, Plant Physiol., 122, 147, 10.1104/pp.122.1.147
Sineshchekov, 2004, The JA-free rice mutant hebiba is affected in the response of phyA'/phyA'' pools and protochlorophyllide biosynthesis to far-red light, Photochem. Photobiol. Sci., 3, 1058, 10.1039/B406795A
Smith, 1997, Antagonistic but complementary actions of phytochromes A and B allow optimum seedling de-etiolation, Plant Physiol., 114, 637, 10.1104/pp.114.2.637
Somers, 1991, The hy3 long hypocotyl mutant of Arabidopsis is deficient in phytochrome B, Plant Cell, 3, 1263, 10.2307/3869307
Staswick, 1992, Methyl JA inhibition of root growth and induction of a leaf protein are decreased in an Arabidopsis thaliana mutant, Proc. Natl. Acad. Sci. USA, 89, 6837, 10.1073/pnas.89.15.6837
Staswick, 2004, The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis, Plant Cell, 16, 2117, 10.1105/tpc.104.023549
Staswick, 2002, JA response locus JAR1 and several related Arabidopsis genes encode enzymes of the firefly luciferase superfamily that show activity on jasmonic, salicylic, and indole-3-acetic acids in an assay for adenylation, Plant Cell, 14, 1405, 10.1105/tpc.000885
Stintzi, 2000, The Arabidopsis male-sterile mutant, opr3, lacks the 12-oxophytodienoic acid reductase required for JA synthesis, Proc. Natl. Acad. Sci. USA, 97, 10625, 10.1073/pnas.190264497
Stintzi, 2001, Plant defense in the absence of jasmonic acid: The role of cyclopentenones, Proc. Natl. Acad. Sci. USA, 98, 12837, 10.1073/pnas.211311098
Tepperman, 2001, Multiple transcription-factor genes are early targets of phytochrome A signaling, Proc. Natl. Acad. Sci. USA, 98, 9437, 10.1073/pnas.161300998
Thaller, 1998, Conserved sequence motifs among bacterial, eukaryotic, and archaeal phosphatases that define a new phosphohydrolase superfamily, Protein Sci., 7, 1647, 10.1002/pro.5560070722
Thines, 2007, JAZ repressor proteins are targets of the SCFCOI1 complex during JA signalling, Nature, 448, 661, 10.1038/nature05960
Tsuchiya, 1999, Cloning of chlorophyllase, the key enzyme in chlorophyll degradation: Finding of a lipase motif and the induction by methyl jasmonate, Proc. Natl. Acad. Sci. USA, 96, 15362, 10.1073/pnas.96.26.15362
Ueda, 1980, Isolation and identification of a senescence-promoting substance from wormwood (Artemisia absinthium L.), Plant Physiol., 66, 246, 10.1104/pp.66.2.246
Wang, 2002, Analysis of far-red light-regulated genome expression profiles of phytochrome A pathway mutants in Arabidopsis, Plant J., 32, 723, 10.1046/j.1365-313X.2002.01462.x
Wang, 2008, Identification and characterization of COI1-dependent transcription factor genes involved in JA-mediated response to wounding in Arabidopsis plants, Plant Cell Rep., 27, 125, 10.1007/s00299-007-0410-z
Wasternack, 2007, JAs: An update on biosynthesis, signal transduction and action in plant stress response, growth and development, Ann. Bot. (Lond.), 100, 681, 10.1093/aob/mcm079
Whitelam, 1993, Phytochrome-a null mutants of Arabidopsis display a wild-type phenotype in white light, Plant Cell, 5, 757
Whitelam, 1982, Photomorphogenesis in Impatiens parviflora and other plant species under simulated natural canopy radiations, New Phytol., 90, 611, 10.1111/j.1469-8137.1982.tb03270.x
Xie, 1998, COI1: An Arabidopsis gene required for JA-regulated defense and fertility, Science, 280, 1091, 10.1126/science.280.5366.1091
Xu, 2002, The SCFCOl1 ubiquitin-ligase complexes are required for JA response in Arabidopsis, Plant Cell, 14, 1919, 10.1105/tpc.003368
Yadav, 2005, A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic Growth, Plant Cell, 17, 1953, 10.1105/tpc.105.032060
Yan, 2007, A downstream mediator in the growth repression limb of the JA pathway, Plant Cell, 19, 2470, 10.1105/tpc.107.050708
Yan, 2009, The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor, Plant Cell, 21, 2220, 10.1105/tpc.109.065730
Yanovsky, 1995, Phytochrome A, phytochrome B and HY4 are involved in hypocotyl growth responses to natural radiation in Arabidopsis: Weak de-etiolation of the phyA mutant under dense canopies, Plant Cell Environ., 18, 788, 10.1111/j.1365-3040.1995.tb00582.x
Zhai, 2007, Phytochrome chromophore deficiency leads to overproduction of jasmonic acid and elevated expression of JA-responsive genes in Arabidopsis, Plant Cell Physiol., 48, 1061, 10.1093/pcp/pcm076