Isolation and Characterization of the Cold-Induced Phyllostachys edulis AP2/ERF Family Transcription Factor, peDREB1

Agarwal PK, Agarwal P, Reddy MK, Sopory SK (2006) Role of DREB transcription factors in abiotic and biotic stress tolerance in plants. Plant Cell Rep 25:1263–1274 Allen MD, Yamasaki K, Ohme-Takagi M, Tateno M, Suzuki M (1998) A novel mode of DNA recognition by a β-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA. EMBO J 17:5484–5496 Ashraf M (2010) Inducing drought tolerance in plants: recent advances. Biotechnol Adv 28:169–183 Cao ZF, Li J, Chen F, Li YQ, Zhou HM, Liu Q (2001) Effect of two conserved amino-acid residues on DREB1A function. Biochemistry 66:623–627 Chen M, Wang QY, Cheng XG, Xu ZS, Li LC, Ye XG, Xia LQ, Ma YZ (2007) GmDREB2, a soybean DRE-binding transcription factor, conferred drought and high-salt tolerance in transgenic plants. Biochem Biophys Res Commun 353:299–305 Chiu W, Niwa Y, Zeng W, Hirano T, Kobayashi H, Sheen J (1996) Engineered GFP as a vital reporter in plants. Curr Biol 6:325–330 Choi DW, Rodriguez EM, Close TJ (2002) Barley Cbf3 gene identification, expression pattern, and map location. Plant Physiol 129:1781–1787 Dubouzet JG, Sakuma Y, Ito Y, Kasuga M, Dubouzet EG, Miura S, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2003) OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression. Plant J 33:751–763 Fujita Y, Fujita M, Shinozaki K, Yamaguchi-Shinozaki K (2011) ABA-mediated transcriptional regulation in response to osmotic stress in plants. J Plant Res 124:509–525 Gao MJ, Allard G, Byass L, Flanagan AM, Singh J (2002) Regulation and characterization of four CBF transcription factors from Brassica napus. Plant Mol Biol 49:459–471 Huang B, Jin LG, Liu JY (2008) Identification and characterization of the novel gene GhDBP2 encoding a DRE-binding protein from cotton (Gossypium hirsutum). J Plant Physiol 165:214–223 Hussain SS, Kayani MA, Amjad M (2011) Transcription factors as tools to engineer enhanced drought stress tolerance in plants. Biotechnol Prog 27:297–306 Jiang FL, Wang F, Wu Z, Li Y, Shi GJ, Hu JD, Hou XL (2011) Components of the Arabidopsis CBF cold-response pathway are conserved in non-heading Chinese cabbage. Plant Mol Biol Rep 29:525–532 Latini A, Rasi C, Sperandei M, Cantale C, Iannetta M, Dettori M, Ammar K, Galeffi P (2007) Identification of a DREB-related gene in Triticum durum and its expression under water stress conditions. Ann Appl Biol 15:187–195 Lee SJ, Cho DI, Kang JY, Kim SY (2009) An ARIA-interacting AP2 domain protein is a novel component of ABA signaling. Mol Cells 27:409–416 Li LB, Zhao H, Liu L, He CF, Bai R, Zhang L, Hu T (2011) Isolation and characterization of a cold-induced DREB gene from Cymbidium insigne. J Hort Sci Biol 86:43–49 Liese W (1987) Research on bamboo. Wood Sci Technol 21:189–209 Liu Q, Kasuga M, Sakuma Y, Abe H, Miura S, Yamaguchi-Shinozaki K, Shinozaki K (1998) Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10:1391–1406 Liu L, Zhao H, He CF, Bai R, Yao N, Li LB (2011) Isolation and characterisation of a gene for a DREB transcription factor from Phyllostachys edulis. J Hort Sci Biol 86:166–174 Lucas S, Durmaz E, Akpınar BA, Budak H (2011) The drought response displayed by a DRE-binding protein from Triticum dicoccoides. Plant Physiol Biochem 49:346–351 Mizuno S, Hirasawa Y, Sonoda M, Nakagawa H, Sato T (2006) Isolation and characterization of three DREB/ERF-type transcription factors from melon (Cucumis melo). Plant Sci 170:1156–1163 Murashige T, Skoog F (1962) A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol Plant 15(3):473–497 Riechmann JL, Heard J, Martin G, Reuber L, Jiang C, Keddie J, Adam L, Pineda O, Ratcliffe OJ, Samaha RR, Creelman R, Pilgrim M, Broun P, Zhang JZ, Ghandehari D, Sherman BK, Yu G (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290:2105–2110 Saibo NJ, Lourenco T, Oliveira MM (2009) Transcription factors and regulation of photosynthetic and related metabolism under environmental stresses. Ann Bot 103:609–623 Sakuma Y, Liu Q, Dubouzet JG, Abe H, Shinozaki K, Yamaguchi-Shinozaki K (2002) DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration and cold-inducible gene expression. Biochem Biophys Res Commun 290:998–1009 Sakuma Y, Maruyama K, Osakabe Y, Qin F, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2006) Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought responsive gene expression. Plant Cell 18:1292–1309 Shen YG, Zhang WK, He SJ, Zhang JS, Liu Q, Chen SY (2003) An EREBP/AP2-type protein in Triticum aestivum was a DRE-binding transcription factor induced by cold, dehydration and ABA stress. Theor Appl Genet 106:923–930 Stockinger EJ, Gilmour SJ, Thomashow MF (1997) Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit. Proc Natl Acad Sci USA 94:1035–1040 Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599 Tang MJ, Lu SY, Jing YX, Zhou XJ, Sun JW, Shen SH (2005) Isolation and identification of a cold-inducible gene encoding a putative DRE-binding transcription factor from Festuca arundinacea. Plant Physiol Biochem 43:233–239 Tang MJ, Liu XF, Deng HP, Shen SH (2011) Over-expression of JcDREB, a putative AP2/EREBP domain-containing transcription factor gene in woody biodiesel plant Jatropha curcas, enhances salt and freezing tolerance in transgenic Arabidopsis thaliana. Plant Sci 181:623–631 Thomashow MF (1998) Role of cold-responsive genes in plant freezing tolerance. Plant Physiol 118:1–7 Tsaftaris AS, Pasentsis K, Madesis P, Argiriou A (2011) Sequence characterization and expression analysis of three APETALA2-like genes from saffron crocus. Plant Mol Biol Rep. doi:10.1007/s11105-011-0355-9 Wang YM, He CF (2007) Isolation and characterization of a cold-induced DREB gene from Aloe vera L. Plant Mol Biol Rep 25:121–132 Wang JW, Yang FP, Chen XQ, Liang RQ, Zhang LQ, Geng DM, Zhang XD, Song YZ, Zhang GS (2006) Induced expression of DREB transcriptional factor and study on its physiological effects of drought tolerance in transgenic wheat. Acta Genefiea Sink 33:468–476 Wang CT, Yang Q, Wang CT (2011a) Isolation and functional characterization of ZmDBP2 encoding a dehydration-responsive element-binding protein in Zea mays. Plant Mol Biol Rep 29:60–68 Wang J, Wang J, Zhang HB, Yang YM, Davies KM (2011b) Isolation and partial characterization of an R2R3MYB transcription factor from the bamboo species Fargesia fungosa. Plant Mol Biol Rep. doi:10.1007/s11105-011-0319-0 Wang XM, Dong J, Liu Y, Gao HW (2011c) A novel dehydration-responsive Element-Binding protein from Caragana korshinskii is involved in the response to multiple abiotic stresses and enhances stress tolerance in transgenic tobacco. Plant Mol Biol Rep 28:664–675 Weising K, Nybom H, Wolff K, Meyer W (1995) DNA isolation and purification. In: DNA finger printing in plants and fungi. CRC, Boca Raton, pp 44–59 Xu ZS, Chen M, Li LC, Ma YZ (2011) Functions and application of the AP2/ERF transcription factor family in crop improvement. J Integr Plant Biol 53:570–585 Yamaguchi-Shinozaki K, Shinozaki K (2005) Organization of cis-acting regulatory elements in osmotic and cold-stress responsive promoters. Trends Plant Sci 10:88–94 Zhou MB, Yang P, Gao PJ, Tang DQ (2011) Identification of differentially expressed sequence tags in rapidly elongating Phyllostachys pubescens internodes by suppressive subtractive hybridization. Plant Mol Biol Rep 29:224–231 Zhuang J, Yao QH, Xiong AS, Zhang J (2011) Isolation, phylogeny and expression patterns of AP2-like genes in apple (Malus × domestica Borkh). Plant Mol Biol Rep 29:209–216