Iodoacetic acid exposure alters the transcriptome in mouse ovarian antral follicles

Journal of Environmental Sciences - Tập 117 - Trang 46-57 - 2022
Andressa Gonsioroski1, Mary Laws1, Vasiliki E. Mourikes1, Alison Neff1, Jenny Drnevich1,2, Michael J. Plewa1,3, Jodi A. Flaws1
1Department of Comparative Biosciences, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, USA
2Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, USA
3Department of Crop Sciences and the Safe Global Water Institute, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, USA

Tài liệu tham khảo

Adhikari, 2009, Molecular mechanisms underlying the activation of mammalian primordial follicles, Endocrine Rev., 30, 438, 10.1210/er.2008-0048 Andrews, S., 2010. ``FastQC: a quality control tool for high throughput sequence data.'' Retrieved 10/20/2021, from https://www.bioinformatics.babraham.ac.uk/projects/fastqc/. Attene-Ramos, 2010, Comparative human cell toxicogenomic analysis of monohaloacetic acid drinking water disinfection byproducts, Environ. Sci. Technol., 44, 7206, 10.1021/es1000193 Benjamini, 1995, Controlling the false discovery rate: a practical and powerful approach to multiple testing, J. R. Statist. Soc. Ser. B (Methodological), 57, 289 Bodensteiner, 2004, Chronic exposure to dibromoacetic acid, a water disinfection byproduct, diminishes primordial follicle populations in the rabbit, Toxicol. Sci., 80, 83, 10.1093/toxsci/kfh135 Bove, 2007, Case-control study of the effects of trihalomethanes on urinary bladder cancer risk, Arch. Environ. Occup. Health, 62, 39, 10.3200/AEOH.62.1.39-47 Calderon, 2000, The epidemiology of chemical contaminants of drinking water, Food Chem. Toxicol., 38, S13, 10.1016/S0278-6915(99)00133-7 Cemeli, 2006, Modulation of the cytotoxicity and genotoxicity of the drinking water disinfection byproduct lodoacetic acid by suppressors of oxidative stress, Environ. Sci. Technol., 40, 1878, 10.1021/es051602r Chen, 2016, From reads to genes to pathways: differential expression analysis of RNA-Seq experiments using Rsubread and the edgeR quasi-likelihood pipeline, F1000Res, 5, 1438 Dad, 2013, Pyruvate remediation of cell stress and genotoxicity induced by haloacetic acid drinking water disinfection by-products, Environ. Mol. Mutagen., 54, 629, 10.1002/em.21795 Diana, 2019, Disinfection byproducts potentially responsible for the association between chlorinated drinking water and bladder cancer: a review, Water Res., 162, 492, 10.1016/j.watres.2019.07.014 Dong, 2019, Formation of Iodinated Disinfection Byproducts (I-DBPs) in Drinking Water: Emerging Concerns and Current Issues, Acc. Chem. Res., 52, 896, 10.1021/acs.accounts.8b00641 Drewnowski, 2013, Water and beverage consumption among adults in the United States: cross-sectional study using data from NHANES 2005-2010, BMC Public Health, 13, 1068, 10.1186/1471-2458-13-1068 Dupont, 2016, Insulin signalling and glucose transport in the ovary and ovarian function during the ovarian cycle, Biochem. J., 473, 1483, 10.1042/BCJ20160124 Ersan, 2019, Chloramination of iodide-containing waters: Formation of iodinated disinfection byproducts and toxicity correlation with total organic halides of treated waters, Sci. Total Environ., 697, 10.1016/j.scitotenv.2019.134142 Ewels, 2016, MultiQC: summarize analysis results for multiple tools and samples in a single report, Bioinformatics, 32, 3047, 10.1093/bioinformatics/btw354 Fan, 2009, MAPK3/1 (ERK1/2) in ovarian granulosa cells are essential for female fertility, Science, 324, 938, 10.1126/science.1171396 Fortune, 2000, Ovarian oxytocin: periovulatory production and effects, 154 Fu, 2021, RNA-Binding motif protein 11 (RBM11) serves as a prognostic biomarker and promotes ovarian cancer progression, Disease Markers, 2021, 10.1155/2021/3037337 Geister, 2011, Natriuretic peptide signaling regulates female fertility at the level of the ovary, Biology of Reproduction, 85, 128, 10.1093/biolreprod/85.s1.128 Gonsioroski, 2019, Iodoacetic acid inhibits follicle growth and alters expression of genes that regulate apoptosis, the cell cycle, estrogen receptors, and ovarian steroidogenesis in mouse ovarian follicles, Reprod. Toxicol. Gonsioroski, 2021, Iodoacetic acid affects estrous cyclicity, ovarian gene expression, and hormone levels in mice†, Biol. Reprod., 105, 1030, 10.1093/biolre/ioab108 Gonzalez, 2021, Iodoacetic acid, a water disinfection byproduct, disrupts hypothalamic and pituitary reproductive regulatory factors and induces toxicity in the female pituitary, Toxicol. Sci., 84, 46, 10.1093/toxsci/kfab106 Gupta, 2010, Di-(2-ethylhexyl) phthalate and mono-(2-ethylhexyl) phthalate inhibit growth and reduce estradiol levels of antral follicles in vitro, Toxicol. Appl. Pharmacol., 242, 224, 10.1016/j.taap.2009.10.011 Hannon, 2015, Di(2-ethylhexyl) phthalate inhibits antral follicle growth, induces atresia, and inhibits steroid hormone production in cultured mouse antral follicles, Toxicol. Appl. Pharmacol., 284, 42, 10.1016/j.taap.2015.02.010 Hannon, 2018, Folliculogenesis, 72 Huang da, 2009, Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists, Nucleic. Acids. Res., 37, 1, 10.1093/nar/gkn923 Huang da, 2009, Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources, Nat. Protoc., 4, 44, 10.1038/nprot.2008.211 Hwang, 2008, Water disinfection by-products and the risk of specific birth defects: a population-based cross-sectional study in Taiwan, Environ. Health, 7, 23, 10.1186/1476-069X-7-23 Jeong, 2016, Monohaloacetic acid drinking water disinfection by-products inhibit follicle growth and steroidogenesis in mouse ovarian antral follicles in vitro, Reprod. Toxicol., 62, 71, 10.1016/j.reprotox.2016.04.028 Jeong, 2017, The impact of iodinated X-ray contrast agents on formation and toxicity of disinfection by-products in drinking water, J. Environ. Sci., 58, 173, 10.1016/j.jes.2017.03.032 Jiao, 2021, Iodoacetic acid disrupts mouse oocyte maturation by inducing oxidative stress and spindle abnormalities, Environ. Pollut., 268 Jones, 2019, Ingested nitrate, disinfection by-products, and risk of colon and rectal cancers in the Iowa Women’s Health Study cohort, Environ. Int., 126, 242, 10.1016/j.envint.2019.02.010 Kumari, 2018, Chapter 1 - Glycolysis, 1 Li, 2017, Role of the PI3K-Akt signaling pathway in the pathogenesis of polycystic ovary syndrome, Reprod Sci, 24, 646, 10.1177/1933719116667606 Li, 2021, Are disinfection Byproducts (DBPs) formed in My Cup of Tea? Regulated, priority, and unknown DBPs, Environ. Sci. Technol., 55, 12994 Li, 2021, The RNA-Binding motif protein family in cancer: friend or Foe?, Front. Oncol., 11 Li, 2021, Occurrence and distribution of disinfection byproducts in domestic wastewater effluent, tap water, and surface water during the SARS-CoV-2 pandemic in China, Environ. Sci. Technol., 55, 4103, 10.1021/acs.est.0c06856 Liu, 2019, Formation of iodinated trihalomethanes and noniodinated disinfection byproducts during chloramination of algal organic matter extracted from Microcystis aeruginosa, Water Res., 162, 115, 10.1016/j.watres.2019.06.053 Luderer, 2014, Ovarian toxicity from reactive oxygen species, Vitam. Horm., 94, 99, 10.1016/B978-0-12-800095-3.00004-3 Makker, 2014, PI3K/PTEN/Akt and TSC/mTOR signaling pathways, ovarian dysfunction, and infertility: an update, J. Mol. Endocrinol., 53, R103, 10.1530/JME-14-0220 McCarthy, 2012, Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation, Nucleic. Acids. Res., 40, 4288, 10.1093/nar/gks042 Melnick, 2007, Toxicity and carcinogenicity of the water disinfection byproduct, dibromoacetic acid, in rats and mice, Toxicology, 230, 126, 10.1016/j.tox.2006.11.006 Metascape. "Metascape a gene annotation analysis resource." 2021 Retrieved 10/20/2021, from https://metascape.org/gp/index.html#/main/step1. Narotsky, 2011, Pregnancy loss and eye malformations in offspring of F344 rats following gestational exposure to mixtures of regulated trihalomethanes and haloacetic acids, Reprod. Toxicol, 31, 59, 10.1016/j.reprotox.2010.08.002 Narotsky, 2013, Comprehensive assessment of a chlorinated drinking water concentrate in a rat multigenerational reproductive toxicity study, Environ. Sci. Technol., 47, 10653 Pals, 2013, Human cell toxicogenomic analysis linking reactive oxygen species to the toxicity of monohaloacetic acid drinking water disinfection byproducts, Environ. Sci. Technol., 47, 12514, 10.1021/es403171b Pals, 2011, Biological mechanism for the toxicity of haloacetic acid drinking water disinfection byproducts, Environ. Sci. Technol., 45, 5791, 10.1021/es2008159 Patro, 2017, Salmon provides fast and bias-aware quantification of transcript expression, Nat. Methods, 14, 417, 10.1038/nmeth.4197 Peixoto, 2015, How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasets, Nucleic. Acids. Res., 43, 7664, 10.1093/nar/gkv736 Plewa, 2010, Mammalian cell cytotoxicity and genotoxicity of the haloacetic acids, a major class of drinking water disinfection by-products, Environ. Mol. Mutagen., 51, 871, 10.1002/em.20585 Plewa, 2004, Chemical and biological characterization of newly discovered iodoacid drinking water disinfection byproducts, Environ. Sci. Technol., 38, 4713, 10.1021/es049971v Qin, 2021, RBM14 modulates tubulin acetylation and regulates spindle morphology during meiotic maturation in mouse Oocytes, Front. Cell Dev. Biol.y, 9 NIEHS, N. I. o. E. H. S., 2021. "Endocrine disruptors." Retrieved 12/2/2021, from https://www.niehs.nih.gov/health/topics/agents/endocrine/index.cfm. Richardson, 2011, Drinking water disinfection by-products, 20 Richardson, 2008, Occurrence and mammalian cell toxicity of iodinated disinfection byproducts in drinking water, Environ. Sci. Technol., 42, 8330, 10.1021/es801169k Richardson, 2007, Occurrence, genotoxicity, and carcinogenicity of regulated and emerging disinfection by-products in drinking water: a review and roadmap for research, Mutat. Res., 636, 178, 10.1016/j.mrrev.2007.09.001 Rivera-Nunez, 2018, Exposure to disinfectant by-products and the risk of stillbirth in Massachusetts, Occup. Environ. Med., 75, 742, 10.1136/oemed-2017-104861 Robinson, 2010, A scaling normalization method for differential expression analysis of RNA-seq data, Genome Biol., 11, R25, 10.1186/gb-2010-11-3-r25 Srivastav, 2020, Disinfection by-products in drinking water: occurrence, toxicity and abatement, Environ. Pollut., 267, 10.1016/j.envpol.2020.115474 Summerhayes, 2021, Meta-analysis of small for gestational age births and disinfection byproduct exposures, Environ. Res., 196, 10.1016/j.envres.2020.110280 Sun, 2018, Ki-67: more than a proliferation marker, Chromosoma, 127, 175, 10.1007/s00412-018-0659-8 Team, 2018 Teuschler, 2004, A feasibility study of cumulative risk assessment methods for drinking water disinfection by-product mixtures, J. Toxicol. Environ. Health A, 67, 755, 10.1080/15287390490428224 USEPA, 2006, National primary drinking water regulations: stage 2 disinfectants and disinfection byproducts rule, F. Register., 71, 387 USEPA, 2010 Vandenberg, 2014, Low-dose effects of hormones and endocrine disruptors, Vitam. Horm., 94, 129, 10.1016/B978-0-12-800095-3.00005-5 Vandenberg, 2012, Hormones and endocrine-disrupting chemicals: low-dose effects and nonmonotonic dose responses, Endocrine Rev., 33, 378, 10.1210/er.2011-1050 Villanueva, 2004, Disinfection byproducts and bladder cancer: a pooled analysis, Epidemiology, 15, 357, 10.1097/01.ede.0000121380.02594.fc Wagner, 2017, CHO cell cytotoxicity and genotoxicity analyses of disinfection by-products: an updated review, J. Environ. Sci., 58, 64, 10.1016/j.jes.2017.04.021 Wagner, 2015, 3 Wang, 2018, Drinking water disinfection byproduct iodoacetic acid interacts with catalase and induces cytotoxicity in mouse primary hepatocytes, Chemosphere, 210, 824, 10.1016/j.chemosphere.2018.07.061 Wei, 2013, Drinking water disinfection byproduct iodoacetic acid induces tumorigenic transformation of NIH3T3 cells, Environ. Sci. Technol., 47, 5913, 10.1021/es304786b Wilson, 2017, Oxidative phosphorylation: regulation and role in cellular and tissue metabolism, J. Physiol., 595, 7023, 10.1113/JP273839 Wright, 2017, Disinfection by-product exposures and the risk of specific cardiac birth defects, Environ. Health Perspect., 125, 269, 10.1289/EHP103 Xia, 2018, Iodoacetic acid disrupting the thyroid endocrine system in vitro and in vivo, Environ. Sci. Technol., 52, 7545, 10.1021/acs.est.8b01802 Xie, 2017, The role of Notch signalling in ovarian angiogenesis, J. Ovarian Res., 10, 13, 10.1186/s13048-017-0308-5 Zhou, 2017, Effects of an environmentally relevant phthalate mixture on cultured mouse antral follicles, Toxicol. Sci., 156, 217 Zhou, 2019, Metascape provides a biologist-oriented resource for the analysis of systems-level datasets, Nat. Commun., 10, 1523, 10.1038/s41467-019-09234-6