Investigation of the fine structure around the copper site in copper/zinc superoxide dismutase by XANES combined with ab initio calculations
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Hjalmarsson, 1987, Isolation and sequence of complementary DNA encoding human extracellular superoxide dismutase, Proc. Natl. Acad. Sci. USA, 84, 6340, 10.1073/pnas.84.18.6340
Doucette, 2004, Dissociation of human copper-zinc superoxide dismutase dimers using chaotrope and reductant. Insights into the molecular basis for dimer stability, J. Biol. Chem., 279, 54558, 10.1074/jbc.M409744200
Sheng, 2014, Superoxide dismutases and superoxide reductases, Chem. Rev., 114, 3854, 10.1021/cr4005296
Rosen, 1993, Mutations in Cu/Zn superoxide-dismutase gene are associated with familial amyotrophic-lateral-sclerosis, Nature, 362, 59, 10.1038/362059a0
Deng, 1993, Amyotrophic-lateral-sclerosis and structural defects in Cu,Zn superoxide-dismutase, Science, 261, 1047, 10.1126/science.8351519
Tainer, 1982, Determination and analysis of the 2 A-structure of copper, zinc superoxide dismutase, J. Mol. Biol., 160, 181, 10.1016/0022-2836(82)90174-7
Djinović, 1991, Structure solution and molecular dynamics refinement of the yeast Cu,Zn enzyme superoxide dismutase, Acta Crystallogr. B, 47, 918, 10.1107/S0108768191004949
Benfatto, 2003, The MXAN procedure: a new method for analysing the XANES spectra of metalloproteins to obtain structural quantitative information, J. Synchrotron. Radiat., 10, 51, 10.1107/S0909049502018137
Conradson, 1994, Selenol binds to iron in nitrogenase iron-molybdenum cofactor: an extended x-ray absorption fine structure study, Proc. Natl. Acad. Sci., 91, 1290, 10.1073/pnas.91.4.1290
Hayakawa, 2004, Full Quantitative Multiple-Scattering Analysis of X-ray Absorption Spectra: Application to Potassium Hexacyanoferrat(II) and -(III) Complexes, J. Am. Chem. Soc., 126, 15618, 10.1021/ja045561v
Wu, 2005, XANES quantitative structural determination of the sandwich bis(naphthalocyaninato) cerium complex, J. Synchrotron Radiat., 12, 98, 10.1107/S0909049504028833
Zhang, 2010, Arsenic trioxide controls the fate of the PML-RARa oncoprotein by directly binding PML, Science, 328, 240, 10.1126/science.1183424
Nordlander, 1993, Heterometal cuboidal clusters MFe4S6(PEt3)4Cl (M=vanadium, molybdenum): synthesis, structural analysis by crystallography and EXAFS, and relevance to the core structure of the iron-molybdenum cofactor of nitrogenase, J. Am. Chem. Soc., 115, 5549, 10.1021/ja00066a024
Newville, 2001, IFEFFIT: interactive XAFS analysis and FEFF fitting, J. Synchrotron Radiat., 8, 322, 10.1107/S0909049500016964
Ravel, 2005, ATHENA, ARTEMIS, HEPHAESTUS: data analysis for X-ray absorption spectroscopy using IFEFFIT, J. Synchrotron Radiat., 12, 537, 10.1107/S0909049505012719
Ankudinov, 1998, Real-space multiple-scattering calculation and interpretation of x-ray-absorption near-edge structure, Phys. Rev. B, 58, 7565, 10.1103/PhysRevB.58.7565
Longa, 2001, Quantitative analysis of X-ray absorption near edge structure data by a full multiple scattering procedure: the Fe–CO geometry in photolyzed carbonmonoxy-myoglobin single crystal, Phys. Rev. Lett., 87, 155501, 10.1103/PhysRevLett.87.155501
Cardelli, 2003, A crystal-chemical investigation of Cr substitution in muscovite by XANES spectroscopy, Phys. Chem. Miner., 30, 54, 10.1007/s00269-002-0289-8
Natoli, 1986, A unifying scheme of interpretation of X-ray absorption spectra based on the multiple scattering theory, J. Phys. (Paris) Colloq., 47, 11, 10.1051/jphyscol:1986802
Wu, 1996, Sulfur K-edge X-ray-absorption study of the charge transfer upon lithium intercalation into titanium disulfide, Phys. Rev. Lett., 77, 2101, 10.1103/PhysRevLett.77.2101
Norman, 1976, Non-empirical versus experimental choices for overlapping sphere radii ratios in SCF-Xa-SW calculations on ClO4- and SO2, Mol. Phys., 81, 1191, 10.1080/00268977600100921
Joly, 2001, X-ray absorption near-edge structure calculations beyond the muffin-tin approximation, Phys. Rev. B, 63, 125120, 10.1103/PhysRevB.63.125120
Wu, 2001, Symmetry dependence of x-ray absorption near-edge structure at the metal K edge of 3d transition metal compounds, Appl. Phys. Lett., 79, 1918, 10.1063/1.1405149
Kau, 1987, X-ray absorption edge determination of the oxidation state and coordination number of copper: application to the type 3 site in rhus vernicifera laccase and its reaction with oxygen, J. Am. Chem. Soc., 109, 6433, 10.1021/ja00255a032
Longa, 2009, Direct deconvolution of two-state pump-probe X-ray absorption spectra and the structural changes in a 100 ps transient of Ni(II)-tetramesitylporphyrin, Inorg. Chem., 48, 3934, 10.1021/ic8008943