Inverse complementary homologues of short cysteine signatures

Daniel J. Goldstein1, Florence Muri2,3, Patricia Saragueta4, Bernard Prum2
1Departamento de Ciencias Biológicas, Facultad de Ciencia Exactas y Naturales, Universidad de Buenos Aires, Argentina
2Laboratoire de statistique, Upresa CNRS 8071, La Génopole, université d’Évry, France
3Département STID, IUT de Paris, France
4Departamento de Química Biológica, Facultad de Ciencia Exactas y Naturales, Universidad de Buenos Aires, Argentina

Tài liệu tham khảo

Ohno, 1970 Ohno, 1985, The notion of primordial building blocks in construction genes and transcriptional and processing errors due to random occurrence of oligonucleotide signal sequences, Adv. Exp. Med. Biol., 51, 627, 10.1007/978-1-4684-7853-2_34 Bize, 1999, Searching gene transfers on Bacillus subitilis using hidden Markov models, 43 Muri, 1998, Modelling bacterial genomes using hidden Markov models, 89 Churchill, 1989, Stochastic models for heterogeneous DNA sequences, Bull. Math. Biol., 16, 79, 10.1007/BF02458837 Churchill, 1992, Hidden Markov chains and the analysis of genome structure, Comput. Chem., 26, 107, 10.1016/0097-8485(92)80037-Z Durbin, 1998 Lukashin, 1998, GeneMark.hmm: a new solution for gene finding, Nucleic Acids Res., 3, 1107, 10.1093/nar/26.4.1107 Mamitsuka, 1996, A learning method of Hidden Markov Models for sequences discrimination, J. Comput. Biol., 13, 361, 10.1089/cmb.1996.3.361 Fickett, 1991, Base compositional structure of genomes, Genomics, 23, 1056 Borodovski, 1995, Detection of new genes in bacterial genome using Markov models for three gene classes, Nucleic Acids Res., 15, 3554, 10.1093/nar/23.17.3554 Gulati, 1995 Fanning, 1987, The LINE-1 DNA sequences in four mammalian orders predict proteins that conserve homologies to retrovirus proteins, Nucleic Acids Res., 36, 2251, 10.1093/nar/15.5.2251 Westenberg, 1997, Regulation of bacterial gene expression by metals, Adv. Genet., 22, 187, 10.1016/S0065-2660(08)60310-7 Cairns-Smith, 1992, Mineral theories on the origin of life and an iron sulfide example, Orig. Life Evol. Biosph., 28, 5 Lovley, 1997, 187 Walter, 1985, Iron and sulfur in the pre-biologic ocean, Precambr. Res., 94, 205 Gould, 1997, The exaptive excellence of spandrels as a term and prototype, Proc. Natl. Acad. Sci. USA, 205, 10750, 10.1073/pnas.94.20.10750 Gould, 1979, The spandrels of San Marcos and the Panglossian paradigm: a critique of the Adaptationist program, Proc. R. Soc. London B, 581, 10.1098/rspb.1979.0086