Interpretation of the vibrational spectra of matrix‐isolated uracil from scaled ab initio quantum mechanical force fields

International Journal of Quantum Chemistry - Tập 29 Số 4 - Trang 799-815 - 1986
L Harsányi1, Pál Császár2, Attila G. Császár2, James E. Boggs3
1Hungarian Academy of Sciences, Laboratory for Inorganic Chemistry, Department of Structural Studies, P.O. Box 117, H-1431, Budapest, Hungary
2Laboratory of Theoretical Chemistry, Eötvös L. University, Múzeum krt. 6‒8, H-1088 Budapest, Hungary
3Department of Chemistry, The University of Texas, Austin, Texas 78712

Tóm tắt

AbstractThe vibrational spectrum of uracil trapped in an argon matrix has been interpreted based on ab initio Hartree–Fock SCF calculations with a split‐valence 4‒21 basis set. The directly computed theoretical general valence force field was scaled with empirical scale factors in order to correct for the systematic errors originating in the limitation of the theoretical model. Scale factors transferred from related molecules provided a priori prediction of fundamental frequencies and intensities, permitting several corrections to be proposed for earlier assignments. Using the observed spectrum with the few altered assignments, a new set of scale factors was optimized to give the best force field available from combined consideration of the experimental and the theoretical data. For unknown reasons, the out‐of‐plane force field predicted a spectrum agreeing slightly less well with experiment than did the in‐plane force field. However, the overall agreement between theory and experiment provided additional support for the assumptions involved in the method. The computed force fields were compared with others available from previous work. The comparison demonstrated the importance of expanding the energy surface around the true energy minimum and of using a proper scaling procedure. Previous scaled CNDO/2 calculations were found to be surprisingly good despite the large corrections required and the fact that they were made at an incorrect geometry.

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Tài liệu tham khảo

Harsányi L., 1983, Acta Chim. Hung., 113, 257

Tsuboi M., 1973, Physicochemical Properties of Nucleic Acids, 91

10.1016/0584-8539(84)80073-2

10.1021/ja00357a002

10.1021/ja00324a006

Gy.Ferenczy B.Rozsondai L.Harsányi andI.Hargittai J. Mol. Struct. submitted for publication.

Stewart R. F., Chem. Commun., 1968, 1019

10.1107/S0567740869003505

10.1107/S0365110X67004360

10.1063/1.1673767

Nowak M. J., 1978, Z. Naturforsch., 33, 876, 10.1515/znc-1978-11-1213

S.Nunziante‐Cesaro private communication.

10.1016/0040-6031(80)87229-7

10.1002/qua.560260850

10.1016/0022-2860(84)80183-0

Radchenko E. D., 1983, Biofizika, 28, 923

Geller M., Biochim. Biophys. Acta, 1973, 331

10.1016/0584-8539(71)80208-8

10.1016/0584-8539(72)80015-1

10.1021/ja00504a009

10.1021/ja00396a009

10.1063/1.440094

10.1002/qua.560180146

Espinoza‐Müller A. W., 1982, J. Mol. Struct., 90, 187

10.1016/0584-8539(83)80009-9

10.1021/ja00362a005

10.1007/BF00551337

P.Császár A.Császár L.Harsányi andJ. E.Boggs J. Mol. Struct. Theochem in press.

10.1016/0022-2860(84)87044-1

10.1021/ja00322a006

L.Harsányi A.Császár andP.Császár J. Mol. Struct. Theochem in press.

10.1016/0166-1280(81)85088-9

P.Császár A.Császár A.Somogyi Z.Dinya S.Holly M.Gál andJ. E.Boggs Spectrochim. Acta A in press.

G.Pongor G.Fogarasi J. E.Boggs andP.Pulay J. Mol. Spectrosc. in press.