Interleukin-1β (IL-1β) -31C/T and -511T/C promoter single nucleotide polymorphism in colorectal cancer in ethnic Kashmiri population - a case control study

Meta Gene - Tập 12 - Trang 94-103 - 2017
Mujeeb Zafar Banday1, Ashaq Hussain Mir1, Aga Syed Sameer2, Nissar A Chowdri3, Ehtishamul Haq1
1Department of Biotechnology, University of Kashmir, Hazratbal, Srinagar, Kashmir, India
2Department of Basic Medical Sciences, College of Medicine, King Saud Bin Abdulaziz University for Health Sciences, Jeddah, Kingdom of Saudi Arabia
3Department of Surgery, Sher-I-Kashmir Institute of Medical Sciences, Soura, Srinagar, Kashmir, India

Tài liệu tham khảo

Alexander, 2012, A weight-of-evidence review of colorectal cancer in pesticide applicators: the agricultural health study and other epidemiologic studies, Int. Arch. Occup. Environ. Health, 85, 715, 10.1007/s00420-011-0723-7 Andersen, 2013, Interactions between diet, lifestyle and IL10, IL1B, and PTGS2/COX-2 gene polymorphisms in relation to risk of colorectal cancer in a prospective Danish case-cohort study, PLoS One, 8, 10.1371/journal.pone.0078366 Apte, 2006, Effects of micro-environment- and malignant cell-derived interleukin-1 in carcinogenesis, tumour invasiveness and tumour-host interactions, Eur. J. Cancer, 42, 751, 10.1016/j.ejca.2006.01.010 Ayub, 2011, Epidemiological distribution and incidence of different cancers in Kashmir valley—2002–2006, Asian Pac. J. Cancer Prev., 12, 1867 Bardou, 2013, Obesity and colorectal cancer, Gut, 62, 933, 10.1136/gutjnl-2013-304701 Bonin, 2004, How to track and assess genotyping errors in population genetics studies, Mol. Ecol., 13, 3261, 10.1111/j.1365-294X.2004.02346.x Botteri, 2008, Smoking and colorectal cancer: a meta-analysis, JAMA, 300, 2765, 10.1001/jama.2008.839 Boutron, 1995, Family history of colorectal tumours and implications for the adenoma-carcinoma sequence: a case control study, Gut, 37, 830, 10.1136/gut.37.6.830 Brown, 2006, Associations of classic Kaposi sarcoma with common variants in genes that modulate host immunity, Cancer Epidemiol. Biomark. Prev., 15, 926, 10.1158/1055-9965.EPI-05-0791 Camargo, 2004, Interleukin-1beta polymorphisms in Colombian patients with autoimmune rheumatic diseases, Genes Immun., 5, 609, 10.1038/sj.gene.6364133 Chen, 2006, Single nucleotide polymorphisms in the human interleukin-1B gene affect transcription according to haplotype context, Hum. Mol. Genet., 15, 519, 10.1093/hmg/ddi469 Cigrovski Berkovic, 2012, Interleukin 1beta gene single-nucleotide polymorphisms and susceptibility to pancreatic neuroendocrine tumors, DNA Cell Biol., 31, 531, 10.1089/dna.2011.1317 Dinarello, 1996, Biologic basis for interleukin-1 in disease, Blood, 87, 2095, 10.1182/blood.V87.6.2095.bloodjournal8762095 Dinarello, 2009, Immunological and inflammatory functions of the interleukin-1 family, Annu. Rev. Immunol., 27, 519, 10.1146/annurev.immunol.021908.132612 Dinarello, 2011, A clinical perspective of IL-1beta as the gatekeeper of inflammation, Eur. J. Immunol., 41, 1203, 10.1002/eji.201141550 Dranoff, 2004, Cytokines in cancer pathogenesis and cancer therapy, Nat. Rev. Cancer, 4, 11, 10.1038/nrc1252 El-Omar, 2000, Interleukin-1 polymorphisms associated with increased risk of gastric cancer, Nature, 404, 398, 10.1038/35006081 El-Omar, 2001, The role of interleukin-1 polymorphisms in the pathogenesis of gastric cancer, Nature, 412, 99, 10.1038/35083631 Ennas, 2008, Interleukin-1B (IL1B) and interleukin-6 (IL6) gene polymorphisms are associated with risk of chronic lymphocytic leukaemia, Hematol. Oncol., 26, 98, 10.1002/hon.843 Fareed, 2014, Estimating the inbreeding depression on cognitive behavior: a population based study of child cohort, PLoS One, 9, 10.1371/journal.pone.0109585 Gunter, 2006, Inflammation-related gene polymorphisms and colorectal adenoma, Cancer Epidemiol. Biomark. Prev., 15, 1126, 10.1158/1055-9965.EPI-06-0042 Hall, 2004, Correlation of polymorphic variation in the promoter region of the interleukin-1 beta gene with secretion of interleukin-1 beta protein, Arthritis Rheum., 50, 1976, 10.1002/art.20310 Hanahan, 2011, Hallmarks of cancer: the next generation, Cell, 144, 646, 10.1016/j.cell.2011.02.013 Hannan, 2009, The association between cigarette smoking and risk of colorectal cancer in a large prospective cohort from the United States, Cancer Epidemiol. Biomark. Prev., 18, 3362, 10.1158/1055-9965.EPI-09-0661 He, 2011, Interleukin 1 beta (IL1B) promoter polymorphism and cancer risk: evidence from 47 published studies, Mutagenesis, 26, 637, 10.1093/mutage/ger025 Hirankarn, 2006, Interleukin-1beta gene polymorphism associated with hepatocellular carcinoma in hepatitis B virus infection, World J. Gastroenterol., 12, 776, 10.3748/wjg.v12.i5.776 Hoeft, 2008, Joint effect between regular use of non-steroidal anti-inflammatory drugs, variants in inflammatory genes and risk of lymphoma, Cancer Causes Control, 19, 163, 10.1007/s10552-007-9082-9 Honma, 2002, The influence of inflammatory cytokines on estrogen production and cell proliferation in human breast cancer cells, Endocr. J., 49, 371, 10.1507/endocrj.49.371 Hosking, 2004, Detection of genotyping errors by Hardy-Weinberg equilibrium testing, Eur. J. Hum. Genet., 12, 395, 10.1038/sj.ejhg.5201164 Ito, 2007, Interleukin-1beta gene in esophageal, gastric and colorectal carcinomas, Oncol. Rep., 18, 473 Izcue, 2009, Regulatory lymphocytes and intestinal inflammation, Annu. Rev. Immunol., 27, 313, 10.1146/annurev.immunol.021908.132657 Jemal, 2011, Global cancer statistics, CA Cancer J. Clin., 61, 69, 10.3322/caac.20107 Kidd, 2009, IL1beta- and LPS-induced serotonin secretion is increased in EC cells derived from Crohn's disease, Neurogastroenterol. Motil., 21, 439, 10.1111/j.1365-2982.2008.01210.x Kominato, 1995, Monocyte expression of the human prointerleukin 1 beta gene (IL1B) is dependent on promoter sequences which bind the hematopoietic transcription factor Spi-1/PU.1, Mol. Cell. Biol., 15, 58, 10.1128/MCB.15.1.59 Kurtzman, 1999, Cytokines in human breast cancer: IL-1alpha and IL-1beta expression, Oncol. Rep., 6, 65 Landvik, 2009, A specific interleukin-1B haplotype correlates with high levels of IL1B mRNA in the lung and increased risk of non-small cell lung cancer, Carcinogenesis, 30, 1186, 10.1093/carcin/bgp122 Landvik, 2012, Molecular characterization of a cancer-related single nucleotide polymorphism in the pro-inflammatory interleukin-1B gene, Mol. Carcinog., 51, E168, 10.1002/mc.21910 Leal, 2005, Detection of genotyping errors and pseudo-SNPs via deviations from Hardy-Weinberg equilibrium, Genet. Epidemiol., 29, 204, 10.1002/gepi.20086 Lind, 2005, Interleukin 1 receptor antagonist gene polymorphism and risk of lung cancer: a possible interaction with polymorphisms in the interleukin 1 beta gene, Lung Cancer, 50, 285, 10.1016/j.lungcan.2005.07.003 Lind, 2007, Differential binding of proteins to the IL1B-31 T/C polymorphism in lung epithelial cells, Cytokine, 38, 43, 10.1016/j.cyto.2007.05.001 Listman, 2005, Conserved ETS domain arginines mediate DNA binding, nuclear localization, and a novel mode of bZIP interaction, J. Biol. Chem., 280, 41421, 10.1074/jbc.M509143200 Liu, 2006, Functional variants in the promoter of interleukin-1beta are associated with an increased risk of breast cancer: a case-control analysis in a Chinese population, Int. J. Cancer, 118, 2554, 10.1002/ijc.21652 Lo, 2010, Lifestyle, occupational, and reproductive factors and risk of colorectal cancer, Dis. Colon Rectum, 53, 830, 10.1007/DCR.0b013e3181d320b1 Mantovani, 2009, Cancer: Inflaming metastasis, Nature, 457, 36, 10.1038/457036b Mantovani, 2008, Cancer-related inflammation, Nature, 454, 436, 10.1038/nature07205 Otani, 2003, Alcohol consumption, smoking, and subsequent risk of colorectal cancer in middle-aged and elderly Japanese men and women: Japan Public Health Center-based prospective study, Cancer Epidemiol. Biomark. Prev., 12, 1492 Persson, 2009, Interleukin 1-beta gene polymorphisms and risk of gastric cancer in Sweden, Scand. J. Gastroenterol., 44, 339, 10.1080/00365520802556015 Qian, 2010, Macrophage diversity enhances tumor progression and metastasis, Cell, 141, 39, 10.1016/j.cell.2010.03.014 Rizzato, 2011, Interaction between functional polymorphic variants in cytokine genes, established risk factors and susceptibility to basal cell carcinoma of skin, Carcinogenesis, 32, 1849, 10.1093/carcin/bgr197 Saijo, 2002, Proinflammatory cytokine IL-1 beta promotes tumor growth of Lewis lung carcinoma by induction of angiogenic factors: in vivo analysis of tumor-stromal interaction, J. Immunol., 169, 469, 10.4049/jimmunol.169.1.469 Sameer, 2013, Colorectal cancer: molecular mutations and polymorphisms, Front. Oncol., 3, 114, 10.3389/fonc.2013.00114 Shi, 1997, Everything you have ever wanted to know about Yin Yang 1, Biochim. Biophys. Acta, 1332, F49 Singh, 2008, Genetic variants of interleukin-1RN and interleukin-1beta genes and risk of cervical cancer, BJOG, 115, 633, 10.1111/j.1471-0528.2007.01655.x Torre, 2016, Global cancer incidence and mortality rates and trends—an update, Cancer Epidemiol. Biomark. Prev., 25, 16, 10.1158/1055-9965.EPI-15-0578 Tsai, 2005, Interleukin-4 gene, but not the interleukin-1 beta gene polymorphism, is associated with oral cancer, J. Clin. Lab. Anal., 19, 93, 10.1002/jcla.20060 Tsai, 2005, Interleukin-4 gene intron-3 polymorphism is associated with transitional cell carcinoma of the urinary bladder, BJU Int., 95, 432, 10.1111/j.1464-410X.2005.05315.x Vangsted, 2012, A functional polymorphism in the promoter region of the IL1B gene is associated with risk of multiple myeloma, Br. J. Haematol., 158, 515, 10.1111/j.1365-2141.2012.09141.x Vishnoi, 2008, IL-1 gene polymorphisms and genetic susceptibility of gallbladder cancer in a north Indian population, Cancer Genet. Cytogenet., 186, 63, 10.1016/j.cancergencyto.2008.05.004 Vogel, 2007, Prospective study of interaction between alcohol, NSAID use and polymorphisms in genes involved in the inflammatory response in relation to risk of colorectal cancer, Mutat. Res., 624, 88, 10.1016/j.mrfmmm.2007.04.006 Wang, 1998, Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome, Science, 280, 1077, 10.1126/science.280.5366.1077 Wani, 2014, Cancer trends in Kashmir; common types, site incidence and demographic profiles: National Cancer Registry 2000–2012, Indian J. Cancer, 51, 133, 10.4103/0019-509X.138188 Wen, 2006, Effects of haplotypes in the interleukin 1beta promoter on lipopolysaccharide-induced interleukin 1beta expression, Shock, 26, 25, 10.1097/01.shk.0000223125.56888.c7 Whiteman, 2010, Association of Helicobacter pylori infection with reduced risk for esophageal cancer is independent of environmental and genetic modifiers, Gastroenterology, 139, 73, 10.1053/j.gastro.2010.04.009 Wigginton, 2005, A note on exact tests of Hardy-Weinberg equilibrium, Am. J. Hum. Genet., 76, 887, 10.1086/429864 WMA, 2013, World medical association declaration of Helsinki: ethical principles for medical research involving human subjects, JAMA, 310, 2191, 10.1001/jama.2013.281053 Wogan, 2012, Infection, inflammation and colon carcinogenesis, Oncotarget, 3, 737, 10.18632/oncotarget.624 Wu, 2010, Influence of interleukin-1 beta genetic polymorphism, smoking and alcohol drinking on the risk of non-small cell lung cancer, Clin. Chim. Acta, 411, 1441, 10.1016/j.cca.2010.05.035 Xu, 2013, Systematic review and meta-analysis on the association between IL-1B polymorphisms and cancer risk, PLoS One, 8, 10.1371/journal.pone.0063654 Xue, 2010, Interleukin-1B and interleukin-1 RN polymorphisms and gastric carcinoma risk: a meta-analysis, J. Gastroenterol. Hepatol., 25, 1604, 10.1111/j.1440-1746.2010.06428.x Zabaleta, 2008, Interactions of cytokine gene polymorphisms in prostate cancer risk, Carcinogenesis, 29, 573, 10.1093/carcin/bgm277 Zhu, 2008, Association of IL-1B gene polymorphisms with nasopharyngeal carcinoma in a Chinese population, Clin. Oncol. (R. Coll. Radiol.), 20, 207, 10.1016/j.clon.2008.01.003 Zumkeller, 2007, Helicobacter pylori infection, interleukin-1 gene polymorphisms and the risk of colorectal cancer: evidence from a case-control study in Germany, Eur. J. Cancer, 43, 1283, 10.1016/j.ejca.2007.03.005