Intensification of contaminants, hydrology, and pollution of hyporheic zone: the liver of river ecology—a review

Ahmed F, Srinivasa Rao K (2015) Prioritization of sub-watersheds based on morphometric analysis using remote sensing and geographic information system techniques. Int J Remote Sens GIS 4(2):51–65 Akhtar N, Syakir MI, Ahmad MI, Anees MT, Bin Abu Bakar AF, Mizan SA, Alsaadi SF, Khan MMA, Yusuff MSM (2022) Upscaling of surface water and groundwater interactions in hyporheic zone from local to regional scale. Water 14(4):647 Albergamo V, Schollée JE, Schymanski EL, Helmus R, Timmer H, Hollender J, De Voogt P (2019) Nontarget screening reveals time trends of polar micropollutants in a riverbank filtration system. Environ Sci Technol 53(13):7584–7594 Arnon S, Marx LP, Searcy KE, Packman AI (2010) Effects of overlying velocity, particle size, and biofilm growth on stream–subsurface exchange of particles. Hydrol Process: Int J 24(1):108–114 Arora NK, Mishra I (2022) Sustainable development goal 6: global water security. Environ Sustain 5:271–275. https://doi.org/10.1007/s42398-022-00246-5 Baker RG (2000) Holocene environments reconstructed from plant macrofossils in stream deposits from southeastern Nebraska, USA. Holocene 10(3):357–365 Banks VJ, Palumbo-Roe B, Russell CE (2019) The hyporheic zone. Hydrology-the science of water. IntechOpen, London Baranov V, Jourdan J, Pilotto F, Wagner R, Haase P (2020) Complex and nonlinear climate-driven changes in freshwater insect communities over 42 years. Conserv Biol 34(5):1241–1251 Bardini L, Boano F, Cardenas MB, Revelli R, Ridolfi L (2012) Nutrient cycling in bedform induced hyporheic zones. Geochim Cosmochim Acta 84:47–61 Battin TJ, Kaplan LA, Newbold D, Hansen CME (2003) Contributions of microbial biofilms to ecosystem processes in stream mesocosms. Nature 426(6965):439–442 Bencala KE, Gooseff MN, Kimball BA (2011) Rethinking hyporheic flow and transient storage to advance understanding of stream-catchment connections. Water Resour Res. https://doi.org/10.1029/2010WR010066 Biehler A, Chaillou G, Buffin-Bélanger T, Baudron P (2020) Hydrological connectivity in the aquifer–river continuum: impact of river stages on the geochemistry of groundwater floodplains. J Hydrol 590:125379 Boano F, Packman AI, Cortis A, Revelli R, Ridolfi L (2007) A continuous time random walk approach to the stream transport of solutes. Water Resour Res 43:W10425. https://doi.org/10.1029/2007WR006062 Boano F, Revelli R, Ridolfi L (2009) Quantifying the impact of groundwater discharge on the surface–subsurface exchange. Hydrol Process: Int J 23(15):2108–2116 Boulton AJ (2000) River ecosystem health down under: assessing ecological condition in riverine groundwater zones in Australia. Ecosyst Health 6(2):108–118 Boulton AJ (2007) Hyporheic rehabilitation in rivers: restoring vertical connectivity. Freshw Biol 52(4):632–650 Boulton AJ, Findlay S, Marmonier P, Stanley EH, Valett HM (1998) The functional significance of the hyporheic zone in streams and rivers. Ann Rev Ecol Syst 29(1):59–81 Boulton AJ, Datry T, Kasahara T, Mutz M, Stanford JA (2010) Ecology and management of the hyporheic zone: stream–groundwater interactions of running waters and their floodplains. J North Am Benthol Soc 29(1):26–40 Bruno MC, Maiolini B, Carolli M, Silveri L (2009) Impact of hydropeaking on hyporheic invertebrates in an Alpine stream (Trentino, Italy). Ann De Limnol Int J Limnol 45(3):157–170 Bruno MC, Doretto A, Boano F, Ridolfi L, Fenoglio S (2020) Role of the hyporheic zone in increasing the resilience of mountain streams facing intermittency. Water 12(7):2034 Buffington JM, Tonina D (2009) Hyporheic exchange in mountain rivers II: Effects of channel morphology on mechanics, scales, and rates of exchange. Geogr Compass 3(3):1038–1062 Cardenas MB (2008) Surface water-groundwater interface geomorphology leads to scaling of residence times. Geophys Res Lett. https://doi.org/10.1029/2008GL033753 Cardenas E, Tiedje JM (2008) New tools for discovering and characterizing microbial diversity. Curr Opin Biotechnol 19(6):544–549 Cardenas MB, Wilson JL, Zlotnik VA (2004) Impact of heterogeneity, bed forms, and stream curvature on subchannel hyporheic exchange. Water Resour Res. https://doi.org/10.1029/2004WR003008 Collier KJ, Wright-Stow AE, Smith BJ (2004) Trophic basis of production for a mayfly in a North Island, New Zealand, forest stream: contributions of benthic versus hyporheic habitats and implications for restoration. N Z J Mar Freshw Res 38(2):301–314 Conant B Jr (2004) Delineating and quantifying ground water discharge zones using streambed temperatures. Groundwater 42(2):243–257 Cooper WT, Chanton JC, D’Andrilli J, Hodgkins SB, Podgorski DC, Stenson AC, Tfaily MM, Wilson RM (2022) A history of molecular level analysis of natural organic matter by FTICR mass spectrometry and the paradigm shift in organic geochemistry. Mass Spectrom Rev 41(2):215–239 Costanzo SD, Murby J, Bates J (2005) Ecosystem response to antibiotics entering the aquatic environment. Mar Pollut Bull 51(1–4):218–223 Davy-Bowker J, Sweeting W, Wright N, Clarke RT, Arnott S (2006) The distribution of benthic and hyporheic macroinvertebrates from the heads and tails of riffles. Hydrobiologia 563(1):109–123 DelVecchia AG, Shanafield M, Zimmer MA, Busch MH, Krabbenhoft CA, Stubbington R, Kaiser KE, Burrows RM, Hosen J, Datry T (2022) Reconceptualizing the hyporheic zone for nonperennial rivers and streams. Freshw Sci 41(2):167–182 Descloux S, Datry T, Usseglio-Polatera P (2014) Trait-based structure of invertebrates along a gradient of sediment colmation: Benthos versus hyporheos responses. Sci Total Environ 466:265–276 Di Lorenzo T, Fiasca B, Di Cicco M, Cifoni M, Galassi DMP (2021) Taxonomic and functional trait variation along a gradient of ammonium contamination in the hyporheic zone of a Mediterranean stream. Ecol Ind 132:108268 Dichgans F, Boos JP, Ahmadi P, Frei S, Fleckenstein JH (2023) Integrated numerical modeling to quantify transport and fate of microplastics in the hyporheic zone. Water Res 243:120349 Dole-Olivier M-J, Des Châtelliers MC, Galassi DMP, Lafont M, Mermillod-Blondin F, Paran F, Graillot D, Gaur S, Marmonier P (2022) Drivers of functional diversity in the hyporheic zone of a large river. Sci Total Environ 843:156985 Dudley-Southern M, Binley A (2015) Temporal responses of groundwater‐surface water exchange to successive storm events. Water Resour Res 51(2):1112–1126 Dwivedi D (2019) Geochemical exports to river from the intrameander hyporheic zone under transient hydrologic conditions. Water Resour Res. https://doi.org/10.1029/2018WR023377 Fang Y, Chen X, Gomez Velez J, Zhang X, Duan Z, Hammond GE, Goldman AE, Garayburu-Caruso VA, Graham EB (2020) A multirate mass transfer model to represent the interaction of multicomponent biogeochemical processes between surface water and hyporheic zones (SWAT-MRMT-R 1.0). Geosci Model Dev 13(8):3553–3569 Feng R, Duan L, Shen S, Cheng Y, Wang Y, Wang W, Yang S (2023) Temporal dynamic of antibiotic resistance genes in the Zaohe-Weihe hyporheic zone: driven by oxygen and bacterial community. Ecotoxicology 32(1):57–72 Franken RJ, Storey RG, Dudley Williams D (2001) Biological, chemical and physical characteristics of downwelling and upwelling zones in the hyporheic zone of a north-temperate stream. Hydrobiologia 444:183–195 Frei S, Piehl S, Gilfedder BS, Löder MGJ, Krutzke J, Wilhelm L, Laforsch C (2019) Occurrence of microplastics in the hyporheic zone of rivers. Sci Rep 9(1):15256 Fritz BG, Mackley RD, Arntzen EV, Mendoza DP, Patton GW (2008) Methods for assessing the relative amounts of groundwater discharge into the Columbia river and measurement of Columbia river gradients at the Hanford Site’s 300 area. Pacific Northwest National Lab (PNNL). Richland, WA (United States) Fudyma JD, Chu RK, Grachet G, Stegen N, Tfaily MM (2021) Coupled biotic–abiotic processes control biogeochemical cycling of dissolved organic matter in the Columbia river hyporheic zone. Front Water 2:574692 Gan C, Luo Z, Su C, Tong L, Liu H (2023) Mechanism of reactive co-transport of Fe2+ and antibiotics in hyporheic zone simulated by quartz sand column. J Hydrol 621:129641 Gantzer CJ, Rittmann BE, Herricks EE (1988) Mass transport to streambed biofilms. Water Res 22(6):709–722 Garcia-Becerra FY, Ortiz I (2018) Biodegradation of emerging organic micropollutants in nonconventional biological wastewater treatment: a critical review. Environ Eng Sci 35(10):1012–1036 Gasith A, Resh VH (1999) Streams in Mediterranean climate regions: abiotic influences and biotic responses to predictable seasonal events. Annu Rev Ecol Syst 30:51–81 Gomes PIA, Wai OWH (2019) Ecohydrologic structure and function of stream networks with earthen upstream and concrete-lined downstream. Ecohydrology 12(4):e2088 Gomez-Velez JD, Harvey JW (2014) A hydrogeomorphic river network model predicts where and why hyporheic exchange is important in large basins. Geophys Res Lett 41(18):6403–6412 Gomez-Velez JD, Wilson JL, Cardenas MB, Harvey JW (2017) Flow and residence times of dynamic river bank storage and sinuosity‐driven hyporheic exchange. Water Resour Res 53(10):8572–8595 Graham ZA, Stubbs MB, Loughman ZJ (2022) Digging ability and digging performance in a hyporheic gravel-dwelling crayfish, the hairy crayfish Cambarus friaufi (Hobbs 1953)(Decapoda Astacidae: Cambaridae). J Crustacean Biol 42(1):ruac002 Guo F, Jiang G (2020) Hydro-ecological processes of hyporheic zone in a karst spring-fed pool: Effects of groundwater decline and river backflow. J Hydrol 587:124987 Hannah DM, Malcolm IA, Bradley C (2009) Seasonal hyporheic temperature dynamics over riffle bedforms. Hydrol Processes: Int J 23(15):2178–2194 Harvey J, Gooseff M (2015) River corridor science: hydrologic exchange and ecological consequences from bedforms to basins. Water Resour Res 51(9):6893–6922 Hirsch R, Ternes T, Haberer K, Kratz K-L (1999) Occurrence of antibiotics in the aquatic environment. Sci Total Environ 225(1–2):109–118 Höhne A, Müller BM, Schulz H, Dara R, Posselt M, Lewandowski J, McCallum JL (2022) Fate of trace organic compounds in the hyporheic zone: influence of microbial metabolism. Water Res 224:119056 Hölker F, Wurzbacher C, Weißenborn C, Monaghan MT, Holzhauer SIJ, Premke K (2015) Microbial diversity and community respiration in freshwater sediments influenced by artificial light at night. Philos Trans Royal Soc B: Biol Sci 370(1667):20140130 Huang S, Yang JQ (2022) Impacts of emergent vegetation on hyporheic exchange. Geophys Res Lett 49(13):e2022GL099095 Hübner D, Gerke M, Fricke R, Schneider J, Winkelmann C (2020) Cypriniform fish in running waters reduce hyporheic oxygen depletion in a eutrophic river. Freshw Biol 65(9):1518–1528 Iepure S, Gomez-Ortiz D, Lillo J, Rasines-Ladero R, Di Lorenzo T (2022) Applying electrical resistivity tomography and biological methods to assess the hyporheic zone water exchanges in two Mediterranean stream reaches. Water 14(21):3396 Kaiser KE (2022) Reconceptualizing the hyporheic zone for nonperennial rivers and streams. Freshw Sci Kalekar P, Kamble P, Chakraborti S et al (2022) Heavy metal contamination in surface sediments of the Upper Bhima Basin, Maharashtra, India. Environ Sustain 5:507–531 Kasahara T, Li Y, Tanaka A (2022) Effects of dams and reservoirs on organic matter decomposition in the hyporheic zone in forest mountain streams. Hydrobiologia 849(13):2949–2965 Krause S, Heathwaite L, Binley A, Keenan P (2009) Nitrate concentration changes at the groundwater-surface water interface of a small Cumbrian river. Hydrol Processes: Int J 23(15):2195–2211 Krause S, Lewandowski J, Grimm NB, Hannah DM, Pinay G, McDonald K, Martí E, Argerich A, Pfister L, Klaus J (2017) Ecohydrological interfaces as hot spots of ecosystem processes. Water Resour Res 53(8):6359–6376 Krause S, Abbott BW, Baranov V, Bernal S, Blaen P, Datry T, Drummond J, Fleckenstein JH, Velez JG, Hannah DM, Knapp JL (2022) Organizational principles of hyporheic exchange flow and biogeochemical cycling in river networks across scales. Water Res Res 58(3):e2021WR029771 Langenhoff A, Inderfurth N, Veuskens T, Schraa G, Blokland M, Kujawa-Roeleveld K, Rijnaarts H (2013) Microbial removal of the pharmaceutical compounds ibuprofen and diclofenac from wastewater. BioMed Res Int 2013:325806. https://doi.org/10.1155/2013/325806 Lapham L, Buser-Young J, Thurber A, Colwell F (2021) River and hyporheic zone water geochemical data from OsmoSamplers, East River Pumphouse, Colorado, Nov 2017-Sept 2018. Environmental system science data infrastructure for a virtual ecosystem (ESS-DIVE) (United States); Quantifying subsurface biogeochemical variability in a high altitude watershed during winter isolation Lewandowski J, Nützmann G (2010) Nutrient retention and release in a floodplain’s aquifer and in the hyporheic zone of a lowland river. Ecol Eng 36(9):1156–1166 Li Z, Sobek A, Radke M (2015) Flume experiments to investigate the environmental fate of pharmaceuticals and their transformation products in streams. Environ Sci Technol 49(10):6009–6017 Li S-L, Xu S, Wang T-J, Yue F-J, Peng T, Zhong J, Wang L-C, Chen J-A, Wang S-J, Chen X (2020) Effects of agricultural activities coupled with karst structures on riverine biogeochemical cycles and environmental quality in the karst region. Agric Ecosyst Environ 303:107120 Li S, Li B, Liu H, Qi W, Yang Y, Yu G, Qu J (2022) The biogeochemical responses of hyporheic groundwater to the long-run managed aquifer recharge: Linking microbial communities to hydrochemistry and micropollutants. J Hazard Mater 431:128587 Liang D, Song J, Xia J, Chang J, Kong F, Sun H, Cheng D, Zhang Y (2022) Effects of heavy metals and hyporheic exchange on microbial community structure and functions in hyporheic zone. J Environ Manage 303:114201 Luo Y, Zhang Z, Chhowalla M, Liu B (2022) Recent advances in design of electrocatalysts for high‐current‐density water splitting. Adv Mater 34(16):2108133 Maazouzi C, Galassi D, Claret C, Cellot B, Fiers F, Martin D, Marmonier P, Dole-Olivier M (2017) Do benthic invertebrates use hyporheic refuges during streambed drying? A manipulative field experiment in nested hyporheic flowpaths. Ecohydrology 10(6):e1865 Maier HS, Howard KWF (2011) Influence of oscillating flow on hyporheic zone development. Groundwater 49(6):830–844 Malzone JM, Anseeuw SK, Lowry CS, Allen-King R (2016) Temporal hyporheic zone response to water table fluctuations. Groundwater 54(2):274–285 Marchant R, Wells F, Newall P (2000) Assessment of an ecoregion approach for classifying macroinvertebrate assemblages from streams in Victoria, Australia. J North Am Benthol Soc 19(3):497–500 Marciniak M, Ziułkiewicz M, Górecki M (2022) Variability of water exchange in the hyporheic zone of a lowland river in Poland based on gradientometric studies. Quaest Geogr. https://doi.org/10.2478/quageo-2022-0030 Maridet L, Philippe M (1995) Influence of substrate characteristics on the vertical distribution of stream macroinvertebrates in the hyporheic zone. Folia Fac Sci Nat Univ Masarykianae Brunensis 91:101–105 McCallum JL, Shanafield M (2016) Residence times of stream-groundwater exchanges due to transient stream stage fluctuations. Water Resour Res 52(3):2059–2073 Mendoza-Lera C, Ribot M, Foulquier A, Martí E, Bonnineau C, Breil P, Datry T (2019) Exploring the role of hydraulic conductivity on the contribution of the hyporheic zone to in-stream nitrogen uptake. Ecohydrology 12(7):e2139 Mermillod-Blondin F (2011) The functional significance of bioturbation and biodeposition on biogeochemical processes at the water–sediment interface in freshwater and marine ecosystems. J North Amer Benthol Soc 30(3):770–778 Mermillod-Blondin F, Foulquier A, Maazouzi C, Navel S, Negrutiu Y, Vienney A, Simon L, Marmonier P (2013) Ecological assessment of groundwater trophic status by using artificial substrates to monitor biofilm growth and activity. Ecol Ind 25:230–238 Michaelis T, Wunderlich A, Coskun ÖK, Orsi W, Baumann T, Einsiedl F (2022) High-resolution vertical biogeochemical profiles in the hyporheic zone reveal insights into microbial methane cycling. Biogeosciences 19(18):4551–4569 Milner VS, Jones JI, Maddock IP, Bunting GC (2022) The hyporheic zone as an invertebrate refuge during a fine sediment disturbance event. Ecohydrology 15(6):e2450 Nelson AR, Sawyer AH, Gabor RS, Saup CM, Bryant SR, Harris KD, Briggs MA, Williams KH, Wilkins MJ (2019) Heterogeneity in hyporheic flow, pore water chemistry, and microbial community composition in an alpine streambed. J Geophys Rese: Biogeosci 124(11):3465–3478 Nogaro G, Mermillod-Blondin F, Valett MH, François-Carcaillet F, Gaudet J-P, Lafont M, Gibert J (2009) Ecosystem engineering at the sediment–water interface: bioturbation and consumer-substrate interaction. Oecologia 161(1):125–138 Olsen DA, Townsend CR (2003) Hyporheic community composition in a gravel-bed stream: influence of vertical hydrological exchange, sediment structure and physicochemistry. Freshw Biol 48(8):1363–1378 Pacioglu O, Robertson A (2017) The invertebrate community of the chalk stream hyporheic zone: spatio-temporal distribution patterns. Knowl Manage Aquat Ecosyst 418:10 Packman AI, Salehin M, Zaramella M (2004) Hyporheic exchange with gravel beds: Basic hydrodynamic interactions and bedform-induced advective flows. J Hydraul Eng 130(7):647–656 Peralta-Maraver I, Reiss J, Robertson AL (2018) Interplay of hydrology, community ecology and pollutant attenuation in the hyporheic zone. Sci Total Environ 610:267–275 Peter KT, Herzog S, Tian Z, Wu C, McCray JE, Lynch K, Kolodziej EP (2019) Evaluating emerging organic contaminant removal in an engineered hyporheic zone using high resolution mass spectrometry. Water Res 150:140–152 Poole GC, O’daniel SJ, Jones KL, Woessner WW, Bernhardt ES, Helton AM, Stanford JA, Boer BR, Beechie TJ (2008) Hydrologic spiralling: the role of multiple interactive flow paths in stream ecosystems. River Res Appl 24(7):1018–1031 Poole GC, Fogg SK, O’Daniel SJ, Amerson BE, Reinhold AM, Carlson SP, Mohr EJ, Oakland HC (2022) Hyporheic hydraulic geometry: conceptualizing relationships among hyporheic exchange, storage, and water age. PLoS ONE 17(1):e0262080 Posselt M, Jaeger A, Schaper JL, Radke M, Benskin JP (2018) Determination of polar organic micropollutants in surface and pore water by high-resolution sampling-direct injection-ultra high performance liquid chromatography-tandem mass spectrometry. Environ Sci: Process Impacts 20(12):1716–1727 Radke M, Lauwigi C, Heinkele G, Mürdter TE, Letzel M (2009) Fate of the antibiotic sulfamethoxazole and its two major human metabolites in a water sediment test. Environ Sci Technol 43(9):3135–3141 Reidy CA, Clinton SM (2004) Down under: hyporheic zones and their function. University of Washington Water Center Ren J, Hu H, Lu X, Yu R (2023) Water and heat exchange responses to flooding and local storm events in the hyporheic zone driven by a meandering bend. Sci Total Environ 883:163732 Reynolds SK Jr, Benke AC (2012) Chironomid production along a hyporheic gradient in contrasting stream types. Freshw Sci 31(1):167–181 Robertson AL, Wood PJ (2010) Ecology of the hyporheic zone: origins, current knowledge and future directions. Fundam Appl Limnol 176(4):279–289 Roose-Amsaleg C, Laverman AM (2016) Do antibiotics have environmental side-effects? Impact of synthetic antibiotics on biogeochemical processes. Environ Sci Pollut Res 23(5):4000–4012 Runkel RL (2007) Toward a transport-based analysis of nutrient spiraling and uptake in streams. Limnol Oceanogr: Methods 5(1):50–62 Rutere C, Posselt M, Horn MA (2020) Fate of trace organic compounds in hyporheic zone sediments of contrasting organic carbon content and impact on the microbiome. Water 12(12):3518 Sackett JD, Shope CL, Bruckner JC, Wallace J, Cooper CA, Moser DP (2019) Microbial community structure and metabolic potential of the hyporheic zone of a large mid-stream channel bar. Geomicrobiol J 36(9):765–776 Schaper JL, Seher W, Nützmann G, Putschew A, Jekel M, Lewandowski J (2018) The fate of polar trace organic compounds in the hyporheic zone. Water Res 140:158–166 Schmadel NM, Ward AS, Kurz MJ, Fleckenstein JH, Zarnetske JP, Hannah DM, Blume T, Vieweg M, Blaen PJ, Schmidt C (2016) Stream solute tracer timescales changing with discharge and reach length confound process interpretation. Water Resour Res 52(4):3227–3245 Schmid-Araya JM (1994) Spatial and temporal distribution of micro-meiofaunal groups in an alpine gravel stream. Int Ver Theor Angew Limnol: Verh 25(3):1649–1655 Schulz R, Sherwood PR (2008) Physical and mental health effects of family caregiving. J Soc Work Educ 44:105–113 Singer G, Besemer K, Hödl I, Chlup A, Hochedlinger G, Stadler P, Battin TJ (2006) Microcosm design and evaluation to study stream microbial biofilms. Limnol Oceanogr: Methods 4(11):436–447 Singer MB, Stella JC, Dufour S, Piégay H, Wilson RJ, Johnstone L (2013) Contrasting water‐uptake and growth responses to drought in co‐occurring riparian tree species. Ecohydrology 6(3):402–412 Singh T, Gomez-Velez JD, Wu L, Wörman A, Hannah DM, Krause S (2020) Effects of successive peak flow events on hyporheic exchange and residence times. Water Resour Res 56(8):e2020WR027113 Smock LA, Gladden JE, Riekenberg JL, Smith LC, Black CR (1992) Lotic macroinvertebrate production in three dimensions: channel surface, hyporheic, and floodplain environments. Ecology 73(3):876–886 Sobczak WV, Findlay S (2002) Variation in bioavailability of dissolved organic carbon among stream hyporheic flowpaths. Ecology 83(11):3194–3209 Son K, Fang Y, GomezVelez JD, Byun K, Chen X (2022) Combined effects of stream hydrology and land use on basin-scale hyporheic zone denitrification in the Columbia River Basin. Water Resour Res. https://doi.org/10.1029/2021WR031131 Sophocleous M (2002) Interactions between groundwater and surface water: the state of the science. Hydrogeol J 10(1):52–67 Stanley EH, Boulton AJ (1993) Hydrology and the distribution of hyporheos: perspectives from a mesic river and a desert stream. J North Amer Benthol Soc 12(1):79–83 Storey RG, Howard KWF, Williams DD (2003) Factors controlling riffle-scale hyporheic exchange flows and their seasonal changes in a gaining stream: a three‐dimensional groundwater flow model. Water Resour Res 39(2):1034. https://doi.org/10.1029/2002WR001367 Strayer DL, Beighley RE, Thompson LC, Brooks S, Nilsson C, Pinay G, Naiman RJ (2003) Effects of land cover on stream ecosystems: roles of empirical models and scaling issues. Ecosystems 6(5):407–423 Stubbington R (2012) The hyporheic zone as an invertebrate refuge: a review of variability in space, time, taxa and behaviour. Mar Freshw Res 63(4):293–311 Tewari A, Singh PK, Gaur S (2022) Engineered hyporheic zones: design and applications in stream health restoration–a review. Water Supply 22(2):2179–2193 Torgeson JM, Rosenfeld CE, Dunshee AJ, Duhn K, Schmitter R, O’Hara PA, Ng GHC, Santelli CM (2022) Hydrobiogechemical interactions in the hyporheic zone of a sulfate-impacted, freshwater stream and riparian wetland ecosystem. Environ Sci: Process Impacts 24(9):1360–1382 Trauth N, Fleckenstein JH (2017) Single discharge events increase reactive efficiency of the hyporheic zone. Water Resour Res 53(1):779–798 van Grinsven HJM, Bouwman L, Cassman KG, van Es HM, McCrackin ML, Beusen AHW (2015) Losses of ammonia and nitrate from agriculture and their effect on nitrogen recovery in the European Union and the United States between 1900 and 2050. J Environ Qual 44(2):356–367 Vaux WG (1968) Intragravel flow and interchange of water in a streambed. Fish Bull Fish Wildl Service 66(3):479–489 Vonk JE, Tank SE, Walvoord MA (2019) Integrating hydrology and biogeochemistry across frozen landscapes. Nat Commun 10(1):5377 Ward AS (2016) The evolution and state of interdisciplinary hyporheic research. Wiley Interdiscip Rev: Water 3(1):83–103 Ward AS, Schmadel NM, Wondzell SM (2018) Simulation of dynamic expansion, contraction, and connectivity in a mountain stream network. Adv Water Resour 114:64–82 Wohl E (2021) An integrative conceptualization of floodplain storage. Rev Geophys 59(2):e2020RG000724 Wright-Stow AE, Wilcock RJ (2017) Responses of stream macroinvertebrate communities and water quality of five dairy farming streams following adoption of mitigation practices. N Z J Mar Freshwat Res 51(1):127–145 Yan A, Guo X, Hu D, Chen X (2022) Reactive transport of NH4+ in the hyporheic zone from the ground water to the surface water. Water 14(8):1237 Yang S, Carlson K (2003) Evolution of antibiotic occurrence in a river through pristine, urban and agricultural landscapes. Water Res 37(19):4645–4656 Yang Y, Liu W, Zhang Z, Grossart H-P, Gadd GM (2020) Microplastics provide new microbial niches in aquatic environments. Appl Microbiol Biotechnol 104(15):6501–6511 Yu K, Duan Y, Liao P, Xie L, Li Q, Ning Z, Liu C (2020) Watershed-scale distributions of heavy metals in the hyporheic zones of a heavily polluted Maozhou River watershed, southern China. Chemosphere 239:124773 Yuan X, Liu T, Fox P, Bhattacharyya A, Dwivedi D, Williams KH, Davis JA, Waite TD, Nico PS (2022) Production of hydrogen peroxide in an intra-meander hyporheic zone at East River, Colorado. Sci Rep 12(1):1–10 Zhou T, Endreny TA (2013) Reshaping of the hyporheic zone beneath river restoration structures: Flume and hydrodynamic experiments. Water Resour Res 49(8):5009–5020 Zhou Z, Zhou Z (2023) Investigating the hydrodynamic and biogeochemical evolutions of the hyporheic zone due to large-scale reservoir impoundment. J Hydrol 620:129475 Zhu A, Yang Z, Liang Z, Gao L, Li R, Hou L, Li S, Xie Z, Wu Y, Chen J, Cao L (2020) Integrating hydrochemical and biological approaches to investigate the surface water and groundwater interactions in the hyporheic zone of the Liuxi River basin, southern China. J Hydrol 583:124622