Integrative analysis of the cuticular lipidome and transcriptome of Sorghum bicolor reveals cultivar differences in drought tolerance

Plant Physiology and Biochemistry - Tập 163 - Trang 285-295 - 2021
Xuefeng Zhang1,2, Yu Ni2, Daixiang Xu2, Luke Busta3, Yu Xiao2, Reinhard Jetter4,5, Yanjun Guo1
1College of Animal Science and Technology, Southwest University, Chongqing, 400716, China
2College of Agronomy and Biotechnology, Southwest University, Chongqing 400716, China
3Department of Biochemistry and Center for Plant Science Innovation, University of Nebraska Lincoln, Lincoln, NE, 68588, USA
4Department of Botany, University of British Columbia, 6270 University Boulevard, Vancouver BC, V6T 1Z4, Canada
5Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1, Canada

Tài liệu tham khảo

Abramoff, 2004, Image processing with ImageJ, Biophot. Int., 36 Bach, 2008, The very-long-chain hydroxy fatty acyl-CoA dehydratase PASTICCINO2 is essential and limiting for plant development, Proc. Natl. Acad. Sci. U. S. A., 105, 14727, 10.1073/pnas.0805089105 Bakan, 2017, Assembly of the cutin polyester: from cells to extracellular cell walls, Plants-Basel, 6, 12 Bates, 1973, Rapid determination of free proline for water-stress studies, Plant Soil, 39, 205, 10.1007/BF00018060 Beattie, 2010, Effect of alterations in cuticular wax biosynthesis on the physicochemical properties and topography of maize leaf surfaces, Plant Cell Environ., 25, 1, 10.1046/j.0016-8025.2001.00804.x Bi, 2017, The impact of drought on wheat leaf cuticle properties, BMC Plant Biol., 17, 13, 10.1186/s12870-017-1033-3 Burkhardt, 2014, Particulate pollutants are capable to 'degrade' epicuticular waxes and to decrease the drought tolerance of Scots pine (Pinus sylvestris L.), Environ. Pollut., 184, 659, 10.1016/j.envpol.2013.04.041 Cameron, 2006, Increased accumulation of cuticular wax and expression of lipid transfer protein in response to periodic drying events in leaves of tree tobacco, Plant Physiol., 140, 176, 10.1104/pp.105.069724 Chen, 2011, A functional cutin matrix is required for plant protection against water loss, Plant Signal. Behav., 6, 1297, 10.4161/psb.6.9.17507 Domínguez, 2015, Plant cutin genesis: unanswered questions, Trends Plant Sci., 551, 10.1016/j.tplants.2015.05.009 Eftekhari, 2017, Differences in the drought stress response of DREB2 and CAT1 genes and evaluation of related physiological parameters in some bread wheat cultivars, Biotechnol. Biotechnol. Equip., 31, 709 Flexas, 2004, Diffusive and metabolic limitations to photosynthesis under drought and salinity in C-3 plants, Plant Biol., 6, 269, 10.1055/s-2004-820867 Franke, 2005, Apoplastic polyesters in Arabidopsis surface tissues--a typical suberin and a particular cutin, Phytochemistry, 66, 2643, 10.1016/j.phytochem.2005.09.027 González, 2010, Effect of terminal water stress on leaf epicuticular wax load, residual transpiration and grain yield in barley, Euphytica, 172, 341, 10.1007/s10681-009-0027-0 Greer, 2007, The cytochrome P450 enzyme CYP96A15 is the midchain alkane hydroxylase responsible for formation of secondary alcohols and ketones in stem cuticular wax of arabidopsis, Plant Physiol., 145, 653, 10.1104/pp.107.107300 Hamann, 2021, Review: plant eco-evolutionary responses to climate change: emerging directions, Plant Sci. Int. J. Exp. Plant Biol., 304, 110737 Heath, 1968, Photoperoxidation in isolated chloroplasts .I. Kinetics and stoichiometry of fatty acid peroxidation, Arch. Biochem. Biophys., 125, 189, 10.1016/0003-9861(68)90654-1 Heredia, 2003, Biophysical and biochemical characteristics of cutin, a plant barrier biopolymer, BBA Gen. Subj., 1620, 1, 10.1016/S0304-4165(02)00510-X Hu, 2010, Significance of a beta-ketoacyl-CoA synthase gene expression for wheat tolerance to adverse environments, Biol. Plantarum, 54, 575, 10.1007/s10535-010-0103-2 Huber, 2010 Javelle, 2011, Epidermis: the formation and functions of a fundamental plant tissue, New Phytol., 189, 17, 10.1111/j.1469-8137.2010.03514.x Jetter, 2006 Kim, 2007, Changes in leaf cuticular waxes of sesame (Sesamum indicum L.) plants exposed to water deficit, J. Plant Physiol., 164, 1134, 10.1016/j.jplph.2006.07.004 Kim, 2013, TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions, Genome Biol., 14, 13, 10.1186/gb-2013-14-4-r36 Kosma, 2016, Answering a four decade-old question on epicuticular wax biosynthesis, J. Exp. Bot., 2538, 10.1093/jxb/erw144 Kosma, 2009, The impact of water deficiency on leaf cuticle lipids of arabidopsis, Plant Physiol., 151, 1918, 10.1104/pp.109.141911 Lee, 2015, Advances in the understanding of cuticular waxes in Arabidopsis thaliana and crop species, Plant Cell Rep., 34, 557, 10.1007/s00299-015-1772-2 Liu, 2017, Experimental study of leaf wax n-alkane response in winter wheat cultivars to drought conditions, Org. Geochem., 113, 210, 10.1016/j.orggeochem.2017.07.020 Lu, 2012, Arabidopsis ECERIFERUM9 involvement in cuticle formation and maintenance of plant water status, Plant Physiol., 159, 930, 10.1104/pp.112.198697 Miao, 2009, Composition of secondary alcohols, ketones, alkanediols, and ketols in Arabidopsis thaliana cuticular waxes, J. Exp. Bot., 60, 1811, 10.1093/jxb/erp061 Mullet, 2005, Sorghum and the genetic basis of drought tolerance, Comp. Biochem. Physiol. A Mol. Integr. Physiol., 141, S299 Ni, 2012, Leaf cuticular waxes and physiological parameters in alfalfa leaves as influenced by drought, Photosynthetica, 50, 458, 10.1007/s11099-012-0055-1 Ni, 2014, Changes of epicuticular wax induced by enhanced UV-B radiation impact on gas exchange in Brassica napus, Acta Physiol. Plant., 36, 2481, 10.1007/s11738-014-1621-x Premachandra, 1992, Leaf water relations, osmotic adjustment, cell-membrane stability, epicuticular wax load and growth as affected by increasing water deficits in sorghum, J. Exp. Bot., 43, 1569, 10.1093/jxb/43.12.1569 Pruitt, 2000, FIDDLEHEAD, a gene required to suppress epidermal cell interactions in Arabidopsis, encodes a putative lipid biosynthetic enzyme, Proc. Natl. Acad. Sci. U. S. A., 97, 1311, 10.1073/pnas.97.3.1311 Ray, 2018, Effects of drought on crop production and cropping areas in Texas, Agric. Env. Lett., 3, 5, 10.2134/ael2017.11.0037 Razeq, 2014, Extracellular lipids of Camelina sativa: characterization of chloroform-extractable waxes from aerial and subterranean surfaces, Phytochemistry, 106, 188, 10.1016/j.phytochem.2014.06.018 Riederer, 2006 San-Miguel, 2014, Biomimetic polymers of plant cutin: an approach from molecular modeling, J. Mol. Model., 20, 2329, 10.1007/s00894-014-2329-y Saneoka, 1987, Relationship between water use efficiency and cuticular wax deposition in warm season forage crops grown under water deficit conditions, Soil Sci. Plant Nutr., 33, 439, 10.1080/00380768.1987.10557590 Sanjari, 2021, Molecular, chemical, and physiological analyses of sorghum leaf wax under post-flowering drought stress, Plant Physiol. Biochem., 159, 383, 10.1016/j.plaphy.2021.01.001 Schmittgen, 2008, Analyzing real-time pcr data by the comparative c(t) method, Nat. Protoc., 3, 1101, 10.1038/nprot.2008.73 Shao, 2005, Changes of anti-oxidative enzymes and MDA content under soil water deficits among 10 wheat (Triticum aestivum L.) genotypes at maturation stage, Colloids Surf. B Biointerfaces, 45, 7, 10.1016/j.colsurfb.2005.06.016 Shepherd, 2010, The effects of stress on plant cuticular waxes, New Phytol., 171, 469, 10.1111/j.1469-8137.2006.01826.x Shiru, 2018, Trend analysis of droughts during crop growing seasons of Nigeria, Sustainability, 10, 871, 10.3390/su10030871 Tomasi, 2017, Characterization of leaf cuticular waxes and cutin monomers of Camelina sativa and closely-related Camelina species, Ind. Crop. Prod., 98, 130, 10.1016/j.indcrop.2017.01.030 Trapnell, 2012, Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks, Nat. Protoc., 7, 562, 10.1038/nprot.2012.016 Wang, 2016, Drought-responsive mechanisms in plant leaves revealed by proteomics, Int. J. Mol. Sci., 17, 30, 10.3390/ijms17101706 Wu, 2012, Response of growth and antioxidant enzymes to osmotic stress in two different wheat (Triticum aestivum L.) cultivars seedlings, Plant Soil Environ., 58, 534, 10.17221/373/2012-PSE Wu, 2019, Expression analysis and functional characterization of CER1 family genes involved in very-long-chain alkanes biosynthesis in Brachypodium distachyon, Front. Plant Sci., 10, 13, 10.3389/fpls.2019.01389 Xiao, 2004, Arabidopsis CYP86A2 represses Pseudomonas syringae type III genes and is required for cuticle development, EMBO J., 23, 2903, 10.1038/sj.emboj.7600290 Xiao, 2020, Chemical profiles of cuticular waxes on various organs of Sorghum bicolor and their antifungal activities, Plant Physiol. Biochem., 155, 596, 10.1016/j.plaphy.2020.08.026 Xu, 2016, Cuticle lipids on heteromorphic leaves of Populus euphratica Oliv. growing in riparian habitats differing in available soil moisture, Physiol. Plantarum, 158, 318, 10.1111/ppl.12471 Yang, 2011, Induced accumulation of cuticular waxes enhances drought tolerance in Arabidopsis by changes in development of stomata, Plant Physiol. Biochem., 49, 1448, 10.1016/j.plaphy.2011.09.006 Yeats, 2013, The formation and function of plant cuticles, Plant Physiol., 163, 5, 10.1104/pp.113.222737 Yeats, 2012, The identification of cutin synthase: formation of the plant polyester cutin, Nat. Chem. Biol., 8, 609, 10.1038/nchembio.960 Zhang, 2005, Overexpression of WXP1, a putative Medicago truncatula AP2 domain-containing transcription factor gene, increases cuticular wax accumulation and enhances drought tolerance in transgenic alfalfa (Medicago sativa), Plant J., 42, 689, 10.1111/j.1365-313X.2005.02405.x