Inoculation of bacterial consortium increases rice yield (Oryza sativa L.) reducing applications of nitrogen fertilizer in San Martin region, Peru

Ahmed, 2017, Excessive use of nitrogenous fertilizers: an unawareness causing serious threats to environment and human health, Environ. Sci. Pollut. Res., 24, 26983, 10.1007/s11356-017-0589-7 Amoli, 2014, vol. 3, 1283 AOAC, 1970 Aon, 2015, Diazotrophic inoculation supplemented nitrogen demand of flooded rice under field conditions, Pakistan J. Agric. Sci., 52, 145 Araújo, 2013, Response of traditional upland rice varieties to inoculation with selected diazotrophic bacteria isolated from rice cropped at the northeast region of Brazil, Appl. Soil Ecol., 64, 49, 10.1016/j.apsoil.2012.10.004 Arruda, 2013, Screening of rhizobacteria isolated from maize (Zea mays L.) in Rio Grande do Sul State (South Brazil) and analysis of their potential to improve plant growth, Appl. Soil Ecol., 63, 15, 10.1016/j.apsoil.2012.09.001 Baldani, 2000, Inoculation of rice plants with the endophytic diazotrophs Herbaspirillum seropedicae and Burkholderia spp, Biol. Fertil. Soils, 30, 485, 10.1007/s003740050027 Baldocchi, 2016, The impact of expanding flooded land area on the annual evapotranspiration of rice, Agric. For. Meteorol., 223, 181, 10.1016/j.agrformet.2016.04.001 Banik, 2019, Application of rice (Oryza sativa L.) root endophytic diazotrophic Azotobacter sp. strain Avi2 (MCC 3432) can increase rice yield under green house and field condition, Microbiol. Res., 219, 56, 10.1016/j.micres.2018.11.004 Basak, 2017, Impact of long-term application of organics, biological, and inorganic fertilizers on microbial activities in rice-based cropping system, Commun. Soil Sci. Plant Anal., 48, 2390, 10.1080/00103624.2017.1411502 Basosi, 2014, Mineral nitrogen fertilizers: environmental impact of production and use, 3 Beneduzi, 2013, Diversity and plant growth promoting evaluation abilities of bacteria isolated from sugarcane cultivated in the south of Brazil, Appl. Soil Ecol., 63, 94, 10.1016/j.apsoil.2012.08.010 Bisht, 2020, Comparing the growth-promoting potential of Paenibacillus lentimorbus and Bacillus amyloliquefaciens in Oryza sativa L. var. Sarju-52 under suboptimal nutrient conditions, Plant Physiol. Biochem., 146, 187, 10.1016/j.plaphy.2019.11.023 Bordoloi, 2019, Impact of nitrogen fertilization and tillage practices on nitrous oxide emission from a summer rice ecosystem, Arch. Agron Soil Sci., 14, 340 Braga, 2018, Polyphasic characterization of bacteria obtained from upland rice cultivated in Cerrado soil, Braz. J. Microbiol., 49, 20, 10.1016/j.bjm.2017.04.004 Castellano-Hinojosa, 2015, Isolation of N2-fixing rhizobacteria from Lolium perenne and evaluating their plant growth promoting traits, J. Basic Microbiol., 55, 1 2019 Chandler, 2015, Role of cyclic lipopeptides produced by Bacillus subtilis in mounting induced immunity in rice (Oryza sativa L.), Physiol. Mol. Plant Pathol., 91, 20, 10.1016/j.pmpp.2015.05.010 Chauhan, 2015, Novel plant growth promoting rhizobacteria—prospects and potential, Appl. Soil Ecol., 95, 38, 10.1016/j.apsoil.2015.05.011 Choi, 2018, Isolation and characterization of a novel metagenomic enzyme capable of degrading bacterial phytotoxin toxoflavin, PloS One, 13 Cottyn, 2001, Bacterial populations associated with rice seed in the tropical environment, Phytopathology, 91, 282, 10.1094/PHYTO.2001.91.3.282 de Souza, 2013, The effect of plant growth-promoting rhizobacteria on the growth of rice (Oryza sativa L.) cropped in southern Brazilian fields, Plant Soil, 366, 585, 10.1007/s11104-012-1430-1 Di Rienzo, 2012 Eberl Etesami, 2016, Co-inoculation with endophytic and rhizosphere bacteria allows reduced application rates of N-fertilizer for rice plant, Rhizosphere, 2, 5, 10.1016/j.rhisph.2016.09.003 Etesami, 2017, Evaluation of Gram-positive rhizosphere and endophytic bacteria for biological control of fungal rice (Oryza sativa L.) pathogens, Eur. J. Plant Pathol., 147, 7, 10.1007/s10658-016-0981-z Etesami, 2018, Use of plant growth promoting rhizobacteria (PGPRs) with multiple plant growth promoting traits in stress agriculture: action mechanisms and future prospects, Ecotoxicol. Environ. Saf., 156, 225, 10.1016/j.ecoenv.2018.03.013 Fahad, 2019, Major constraints for global rice production, 1 Ferreira, 2010, Seleção de bactérias diazotróficas em duas variedades de arroz, Acta Sci. Agron., 32, 179, 10.4025/actasciagron.v32i1.732 Ghaffari, 2018, Plant Growth Promoting Rhizobacteria (PGPR) application with different nitrogen fertilizer levels in rice (Oryza sativa L.), Pertanika J. Trop. Agric. Sci., 41, 715 Govindarajan, 2008, Effects of the inoculation of Burkholderia vietnamiensis and related endophytic diazotrophic bacteria on grain yield of rice, Microb. Ecol., 55, 21, 10.1007/s00248-007-9247-9 Gravel, 2007, Growth stimulation and fruit yield improvement of greenhouse tomato plants by inoculation with Pseudomonas putida or Trichoderma atroviride: possible role of indole acetic acid (IAA), Soil Biol. Biochem., 39, 1968, 10.1016/j.soilbio.2007.02.015 Guimarães, 2013, Produção de arroz inoculado com bactérias diazotróficas marcadas com resistência induzida ao antibiótico estreptomicina, Rev. Ciencias Agrar., 56, 125 Hahn, 2016, Rhizobial inoculation, alone or coinoculated with Azospirillum brasilense, promotes growth of wetland rice, Rev. Bras. Ciênc. Solo, 40, 10.1590/18069657rbcs20160006 Hakeem, 2016, Nitrate and nitrogen oxides: sources, health effects and their remediation, ume 242, 183 Hong-Xing, 2018, The characteristics of methane flux from an irrigated rice farm in East China measured using the eddy covariance method., Agric. For. Meteorol., 249, 228, 10.1016/j.agrformet.2017.11.010 Hongrittipun, 2014, Screening of nitrogen fixing endophytic bacteria in Oryza sativa L, J. Agric. Sci., 6, 66 Hou, 2019, Nitrogen rate and plant density interaction enhances radiation interception, yield and nitrogen use efficiency of mechanically transplanted rice, Agric. Ecosyst. Environ., 269, 183, 10.1016/j.agee.2018.10.001 Hussain, 2015, Rice management interventions to mitigate greenhouse gas emissions: a review, Environ. Sci. Pollut. Res., 22, 3342, 10.1007/s11356-014-3760-4 INIA IRRI Islam, 2012, Improvement of yield potential of rice through combined application of biofertilizer and chemical nitrogen, Afr. J. Microbiol. Res., 6, 745 Jetiyanon, 2017, “Rhizoproduct”, a biofertilizer containing spores of Bacillus cereus strain RS87 for early rice seedling enhancement and with potential for partial fertilizer substitution Songklanakarin, J. Sci. Technol., 39, 109 Jha, 2020, Alterations in the endophyte-enriched root-associated microbiome of rice receiving growth-promoting treatments of urea fertilizer and Rhizobium biofertilizer, Microb. Ecol., 79, 367, 10.1007/s00248-019-01406-7 Kennedy, 2004, Non-symbiotic bacterial diazotrophs in crop-farming systems: can their potential for plant growth promotion be better exploited?, Soil Biol. Biochem., 36, 1229, 10.1016/j.soilbio.2004.04.006 Keswani, 2016, Synthesis of policy support, quality control, and regulatory management of biopesticides in sustainable agriculture, 3 Khalil, 2009, Gaseous nitrogen losses from a Cambisol cropped to spring wheat with urea sizes and placement depths, Soil Sci. Soc. Am. J., 73, 1335, 10.2136/sssaj2008.0153 Khan, 2018, Appraisal of biofertilizers in rice: to supplement inorganic chemical fertilizer, Rice Sci., 25, 357, 10.1016/j.rsci.2018.10.006 Kimura, 1980, A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences, J. Mol. Evol., 16, 111, 10.1007/BF01731581 Kumar, 2016, MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets, Mol. Biol. Evol., 33, 1870, 10.1093/molbev/msw054 Lima, 2017, Characterization of actinobacteria from the semiarid region, and their antagonistic effect on strains of rhizobia, Afr. J. Biotechnol., 16, 499, 10.5897/AJB2016.15724 Martínez-Racines, 1989, 73 Mia, 2012, Effects of rhizobia and plant growth promoting bacteria inoculation on germination and seedling vigor of lowland rice, Afr. J. Biotechnol., 11, 3758 MINAGRI - SIEA, 2018 Mustafa, 2018, Perspectives of using L-tryptophan for improving productivity of agricultural crops: a review, Pedosphere, 28, 16, 10.1016/S1002-0160(18)60002-5 Nguyen, 2017, BioGro: a Plant Growth-Promoting Biofertilizer validated by 15 Years' research from laboratory selection to rice farmer's fields of the Mekong delta, 237 Olanrewaju, 2017, Mechanisms of action of plant growth promoting bacteria, World J. Microbiol. Biotechnol., 33, 197, 10.1007/s11274-017-2364-9 Oszvald, 2008, Characterization of rice storage proteins by SE-HPLC and micro z-arm mixer, J. Cereal. Sci., 48, 68, 10.1016/j.jcs.2007.08.002 Othman, 2014, Phosphate-Solubilizing Bacteria improves nutrient uptake in aerobic rice, 207 Park, 2005, Isolation and characterization of diazotrophic growth promoting bacteria from rhizosphere of agricultural crops of Korea, Microbiol. Res., 160, 127, 10.1016/j.micres.2004.10.003 Pérez-Miranda, 2007, O-CAS, a fast and universal method for siderophore detection, J. Microbiol. Methods, 70, 127, 10.1016/j.mimet.2007.03.023 Prasad, 2019, Plant growth promoting rhizobacteria (PGPR) for sustainable agriculture: perspectives and challenges, 129 Prasertsincharoen, 2015, Effect of root colonization of domestic rice (Oryza sativa L. cv Amaroo) by Burkholderia pseudomallei, Appl. Environ. Microbiol., 10.1128/AEM.00317-15 Price, 2017, Phylogeographic, genomic, and meropenem susceptibility analysis of Burkholderia ubonensis, PLoS Neglected Trop. Dis., 11, 1, 10.1371/journal.pntd.0005928 Punschke, 2011, Selección de cepas de Herbaspirillum spp. promotoras del crecimiento de arroz, Agroc. Urug., 15, 19, 10.31285/AGRO.15.607 Reis, 2004, Burkholderia tropica sp. nov., a novel nitrogen-fixing, plant associated bacterium, Int. J. Syst. Evol. Microbiol., 54, 2155, 10.1099/ijs.0.02879-0 Rodrigues, 2008, Azospirillum amazonense inoculation: effects on growth, yield and N2 fixation of rice (Oryza sativa L.), Plant Soil, 302, 249, 10.1007/s11104-007-9476-1 Sahu, 2018, Microbes: a sustainable approach for enhancing nutrient availability in agricultural soils, 47 Saitou, 1987, The neighbor-joining method: a new method for reconstructing phylogenetics trees, Mol. Biol. Evol., 4, 406 Sandanakirouchenane, 2017, Recent studies on N2 fixing Burkholderia isolates as a biofertilizer for the sustainable agriculture, Int. J. Curr. Microbiol. App. Sci., 6, 2780, 10.20546/ijcmas.2017.611.329 Sarathambal, 2015, Characterization and crop production efficiency of diazotrophic isolates from the rhizosphere of semi-arid tropical grasses of India, Appl. Soil Ecol., 87, 1, 10.1016/j.apsoil.2014.11.004 Sayyed, 2005, Production of microbial iron chelators (siderophores) by fluorescent Pseudomonads, Indian J. Biotechnol., 4, 486 Schwyn, 1987, Universal chemical assay for the detection and determination of siderophores, Anal. Biochem., 160, 47, 10.1016/0003-2697(87)90612-9 Sekhar, 2015, Isolation and identification of shoot-tip associated endophytic bacteria from banana cv. Grand Naine and testing for antagonistic activity against Fusarium oxysporum f. sp. cubense, Am. J. Plant Sci., 6, 943, 10.4236/ajps.2015.67101 Sharma, 2014, Growth promotion of the rice genotypes by PGPRs isolated from rice rhizosphere, J. Soil Sci. Plant Nutr., 14, 505 Shinjo, 2018, Draft genome sequence of Burkholderia vietnamiensis strain RS1, a nitrogen-fixing endophyte isolated from sweet potato, Microbiol. Resour. Announc., 7, 10.1128/MRA.00820-18 Singh, 2018, Are nitrogen fertilizers deleterious to soil health?, Agronomy, 8, 48, 10.3390/agronomy8040048 Spaepen, 2011, Auxin and plant-microbe interactions, CSH Perspect. Biol., 3, 4 Take-Tsaba, 2018, Influence of biofertilizer on growth improvement of aerobic rice genotypes, J. Anim. Plant Sci., 28, 1774 Talbi, 2010, Burkholderia phymatum strains capable of nodulating Phaseolus vulgaris are present in Moroccan soils, Appl. Environ. Microbiol., 76, 4587, 10.1128/AEM.02886-09 Tan, 2015, Assessment of plant growth-promoting rhizobacteria (PGPR) and rhizobia as multi-strain biofertilizer on growth and N2 fixation of rice plant, Aust. J. Crop. Sci., 9, 1257 Tang, 2010, Burkholderia vietnamiensis isolated from root tissues of nipa palm (Nypa fruticans) in Sarawak, Malaysia, proved to be its major endophytic nitrogen-fixing bacterium, Biosci. Biotechnol. Biochem., 74, 1972, 10.1271/bbb.100397 Tchakounté, 2018, Community structure and plant growth-promoting potential of cultivable bacteria isolated from Cameroon soil, Microbiol. Res., 214, 47, 10.1016/j.micres.2018.05.008 Thompson, 1994, Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673 Valdez-Nuñez Weisburg, 1991, 16S ribosomal DNA amplification for phylogenetic study, J. Bacteriol., 173, 697, 10.1128/jb.173.2.697-703.1991 Wilson, 1952, 49p Win, 2019, Influence of rice-husk biochar and Bacillus pumilus strain TUAT-1 on yield, biomass production, and nutrient uptake in two forage rice genotypes, PloS One, 14, 10.1371/journal.pone.0220236 Yadav, 2014, Evaluation of PGPR and different concentration of phosphorus level on plant growth, yield and nutrient content of rice (Oryza sativa), Ecol. Eng., 62, 123, 10.1016/j.ecoleng.2013.10.013 Yanni, 2010, Enhancement of rice production using endophytic strains of Rhizobium leguminosarum bv. trifolii in extensive field inoculation trials within the Egypt Nile delta, Plant Soil, 336, 129, 10.1007/s11104-010-0454-7 Yoon, 2017, Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies, Int. J. Syst. Evol. Microbiol., 67, 1613, 10.1099/ijsem.0.001755 Yu, 2017, An improved strategy for stable biocontrol agents selecting to control rice sheath blight caused by Rhizoctonia solani, Microbiol. Res., 203, 1, 10.1016/j.micres.2017.05.006 Zhao, 2018, Antagonistic endophytic bacteria associated with nodules of soybean (Glycine max L.) and plant growth-promoting properties, Braz. J. Microbiol., 49, 269, 10.1016/j.bjm.2017.06.007