Induced lexico-syntactic patterns improve information extraction from online medical forums
Tóm tắt
Từ khóa
Tài liệu tham khảo
Fox SDuggan M. Health Online. Pew Internet and American Life Project. 2013. http://www.pewinternet.org/Reports/2013/Health-online.aspx
citation_title=Towards internet-age pharmacovigilance: extracting adverse drug reactions from user posts to health-related social networks; citation_author=Leaman R; citation_author=Wojtulewicz L; citation_author=Sullivan R; citation_publisher=Association for Computational Linguistics, ; citation_year=2010; citation_pages=117-25;
citation_title=Google trends: a web-based tool for real-time surveillance of disease outbreaks; citation_author=Carneiro HA; citation_author=Mylonakis E; citation_journal_title=Clin Infect Dis; citation_year=2009; citation_volume=49; citation_pages=1557-64;
citation_title=When Google got flu wrong; citation_author=Butler D; citation_journal_title=Nature; citation_year=2013; citation_volume=494; citation_pages=155-6;
citation_title=Web-scale pharmacovigilance: listening to signals from the crowd; citation_author=White RW; citation_author=Tatonetti NP; citation_author=Shah NH; citation_journal_title=J Am Med Inform Assoc; citation_year=2013; citation_volume=20; citation_pages=404-8;
citation_title=Accelerated clinical discovery using self-reported patient data collected online and a patient-matching algorithm; citation_author=Wicks P; citation_author=Vaughan TE; citation_author=Massagli MP; citation_journal_title=Nat Biotechnol; citation_year=2011; citation_volume=29; citation_pages=411-14;
citation_title=PatientsLikeMe: consumer health vocabulary as a folksonomy; citation_author=Smith CA; citation_author=Wicks PJ; citation_publisher=American Medical Informatics Association, ; citation_year=2008; citation_pages=682
citation_title=Automatic recognition of multi-word terms: the C-value/NC-value method; citation_author=Frantzi K; citation_author=Ananiadou S; citation_author=Mima H; citation_journal_title=Int J Digit Libr; citation_year=2000; citation_volume=3; citation_pages=115-30;
citation_title=Identifying medical terms in patient-authored text: a Crowdsourcing-based approach; citation_author=MacLean D; citation_author=Heer J; citation_journal_title=J Am Med Inform Assoc; citation_year=2013; citation_volume=20; citation_pages=1120-7;
citation_title=Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program; citation_author=Aronson AR; citation_publisher=American Medical Informatics Association, ; citation_year=2001; citation_pages=17
citation_title=The open biomedical annotator; citation_author=Jonquet C; citation_author=Shah NH; citation_author=Musen MA; citation_journal_title=Summit Transl Bioinform; citation_year=2009; citation_volume=2009; citation_pages=56-60;
Apache cTakes. http://ctakes.apache.org
citation_title=An overview of MetaMap: historical perspective and recent advances; citation_author=Aronson AR; citation_author=Lang FM; citation_journal_title=J Am Med Inform Assoc; citation_year=2010; citation_volume=17–21; citation_pages=229-36;
citation_title=A study of biomedical concept identification: MetaMap vs. people; citation_author=Pratt W; citation_author=Yetisgen-Yildiz M; citation_publisher=American Medical Informatics Association, ; citation_year=2003; citation_pages=529-33;
citation_title=Automated identification of drug and food allergies entered using non-standard terminology; citation_author=Epstein RH; citation_author=St Jacques P; citation_author=Stockin M; citation_journal_title=J Am Med Inform Assoc; citation_year=2013; citation_volume=20; citation_pages=962-8;
citation_title=Using rule-based natural language processing to improve disease normalization in biomedical text; citation_author=Kang N; citation_author=Singh B; citation_author=Afzal Z; citation_journal_title=J Am Med Inform Assoc; citation_year=2012; citation_volume=20; citation_pages=876-81;
Open Access, Collaborative Consumer Health Vocabulary Initiative. http://www.consumerhealthvocab.org (accessed Feb 2013 ).
MedlinePlus XML Files. http://www.nlm.nih.gov/medlineplus/xml.html
citation_title=Exploring and developing consumer health vocabularies; citation_author=Zeng QT; citation_author=Tse T; citation_journal_title=J Am Med Inform Assoc; citation_year=2006; citation_volume=13; citation_pages=24-9;
citation_title=Automatic acquisition of hyponyms from large text corpora; citation_author=Hearst MA; citation_publisher=Association for Computational Linguistics, ; citation_year=1992; citation_pages=539-45;
citation_title=A Bootstrapping method for learning semantic lexicons using extraction pattern contexts; citation_author=Thelen M; citation_author=Riloff E; citation_year=2002; citation_pages=214-21;
citation_title=Unsupervised method for automatic construction of a disease dictionary from a large free text collection; citation_author=Xu R; citation_author=Supekar K; citation_author=Morgan A; citation_publisher=American Medical Informatics Association, ; citation_year=2008; citation_volume=2008; citation_pages=820-4;
MedHelp. Data spans from 2007 to May 2011. http://www.medhelp.org
Stanford CoreNLP Toolkit. http://nlp.stanford.edu/software/corenlp.shtml (accessed Aug 2013 ).
RxList. http://www.rxlist.com (accessed Jan 2013 ).
MedlinePlus.. http://www.nlm.nih.gov/medlineplus (accessed Jan 2013 ).
MedicineNet. http://www.medicinenet.com (accessed Jan 2013 ).
MedDRA: Medical Dictionary for Regulatory Activities. http://www.meddra.org (accessed Feb 2013 ).
NCI Thesaurus. Semantic types accessed: Antibiotic, Clinical Drug, Laboratory Procedure, Medical Device, Steroid, and Therapeutic or Preventive Procedure. http://ncit.nci.nih.gov (accessed Mar 2013 ).
Google N-grams. http://storage.googleapis.com/books/ngrams/books/datasetsv2.html (accessed Jan 2008 ).
WebMD. http://www.webmd.com (accessed Oct 2013 ).
citation_author=Liang P; citation_publisher=MIT EECS, ; citation_title=Semi-supervised learning for natural language; citation_year=2005;
citation_title=Class-based n-gram models of natural language; citation_author=Brown PF; citation_author=deSouza PV; citation_author=Mercer RL; citation_journal_title=Comput Linguist; citation_year=1992; citation_volume=18; citation_pages=467-79;
citation_author=Finkel JR; citation_author=Grenager T; citation_author=Manning CD; citation_publisher=Association of Computational Linguistics, ; citation_title=Incorporating non-local information into information extraction systems by Gibbs sampling; citation_year=2005; citation_pages=363-70;
citation_title=Hypoglycemic effect of Opuntia streptacantha Lemaire in NIDDM; citation_author=Frati-Munari AC; citation_author=Gordillo BE; citation_author=Altamirano P; citation_journal_title=Diabetes Care; citation_year=1998; citation_volume=11; citation_pages=63-6;
citation_title=Cinnamon improves glucose and lipids of people with type 2 diabetes; citation_author=Khan A; citation_author=Safdar M; citation_author=Ali Khan M; citation_journal_title=Diabetes Care; citation_year=2003; citation_volume=26; citation_pages=3215-18;
citation_title=A novel signal detection algorithm for identifying hidden drug-drug interactions in adverse event reports; citation_author=Tatonetti NP; citation_author=Fernald GH; citation_author=Altman RB; citation_journal_title=J Am Med Inform Assoc; citation_year=2012; citation_volume=19; citation_pages=79-85;