Increased water use efficiency in miR396-downregulated tomato plants
Tài liệu tham khảo
Bartel, 2004, MicroRNAs: genomics, biogenesis, mechanism, and function, Cell, 116, 281, 10.1016/S0092-8674(04)00045-5
Chen, 2005, MicroRNA biogenesis and function in plants, FEBS Lett., 579, 5923, 10.1016/j.febslet.2005.07.071
Llave, 2002, Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA, Science (80-.), 297, 2053, 10.1126/science.1076311
Yu, 2017, The “how” and “where” of plant microRNAs, New Phytol., 216, 1002, 10.1111/nph.14834
Reinhart, 2002, MicroRNAs in plants, Genes Dev., 16, 1616, 10.1101/gad.1004402
Llave, 2002, Endogenous and silencing-associated small RNAs in plants, Plant Cell, 14, 1605, 10.1105/tpc.003210
Sunkar, 2004, Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis, Plant Cell, 16, 2001, 10.1105/tpc.104.022830
Sunkar, 2012, Functions of microRNAs in plant stress responses, Trends Plant Sci., 17, 196, 10.1016/j.tplants.2012.01.010
Zhang, 2015, MicroRNA: a new target for improving plant tolerance to abiotic stress, J. Exp. Bot., 66, 1749, 10.1093/jxb/erv013
Ding, 2013, Emerging roles of microRNAs in the mediation of drought stress response in plants, J. Exp. Bot., 64, 3077, 10.1093/jxb/ert164
Ferdous, 2015, Role of microRNAs in plant drought tolerance, Plant Biotechnol. J., 13, 293, 10.1111/pbi.12318
Pasini, 2014, Microarray analysis of differentially expressed mRNAs and miRNAs in young leaves of sorghum under dry-down conditions, J. Plant Physiol., 171, 537, 10.1016/j.jplph.2013.12.014
Li, 2008, The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance, Plant Cell, 20, 2238, 10.1105/tpc.108.059444
Zhang, 2011, Over-expression of microRNA169 confers enhanced drought tolerance to tomato, Biotechnol. Lett., 33, 403, 10.1007/s10529-010-0436-0
Curaba, 2014, miRNAs in the crosstalk between phytohormone signalling pathways, J. Exp. Bot., 65, 1425, 10.1093/jxb/eru002
Li, 2020, Emerging connections between small RNAs and Phytohormones, Trends Plant Sci., 25, 912, 10.1016/j.tplants.2020.04.004
Shinozaki, 2007, Gene networks involved in drought stress response and tolerance, J. Exp. Bot.
Kazan, 2015, Diverse roles of jasmonates and ethylene in abiotic stress tolerance, Trends Plant Sci., 20, 219, 10.1016/j.tplants.2015.02.001
Riemann, 2015, Exploring jasmonates in the hormonal network of drought and salinity responses, Front. Plant Sci., 6, 1077, 10.3389/fpls.2015.01077
Herde, 1997, Stomatal responses to jasmonic acid, linolenic acid and abscisic acid in wiid-type and ABA-deficient tomato plants, Plant Cell Env., 20, 136, 10.1046/j.1365-3040.1997.d01-11.x
Munemasa, 2007, The coronatine-insensitive 1 mutation reveals the hormonal signaling interaction between abscisic acid and methyl jasmonate in Arabidopsis guard cells. Specific impairment of ion channel activation and second messenger production, Plant Physiol., 143, 1398, 10.1104/pp.106.091298
Hossain, 2011, Involvement of endogenous abscisic acid in methyl jasmonate-induced stomatal closure in Arabidopsis, Plant Physiol., 156, 430, 10.1104/pp.111.172254
De Ollas, 2018, Attenuated accumulation of jasmonates modifies stomatal responses to water deficit, J. Exp. Bot., 69, 2103, 10.1093/jxb/ery045
Bouché, 2004, GABA in plants: just a metabolite?, Trends Plant Sci., 9, 110, 10.1016/j.tplants.2004.01.006
Bown, 2016, Not just a metabolite, Trends Plant Sci., 21, 811, 10.1016/j.tplants.2016.08.001
Liu, 2011, The dominant glutamic acid metabolic flux to produce gamma-amino butyric acid over proline in Nicotiana tabacum leaves under water stress relates to its significant role in antioxidant activity, J. Integr. Plant Biol., 53, 608, 10.1111/j.1744-7909.2011.01049.x
Wang, 2017, Gamma-aminobutyric acid imparts partial protection from salt stress injury to maize seedlings by improving photosynthesis and upregulating osmoprotectants and antioxidants, Sci. Rep., 7, 43609, 10.1038/srep43609
Mekonnen, 2016, Gamma-aminobutyric acid depletion affects stomata closure and drought tolerance of Arabidopsis thaliana, Plant Sci., 245, 25, 10.1016/j.plantsci.2016.01.005
Rodriguez, 2010, Control of cell proliferation in Arabidopsis thaliana by microRNA miR396, Development., 137, 103, 10.1242/dev.043067
Debernardi, 2012, Functional specialization of the plant miR396 regulatory network through distinct microRNA-target interactions, PLoS Genet., 8, e1002419, 10.1371/journal.pgen.1002419
Debernardi, 2014, Post-transcriptional control of GRF transcription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity, Plant J., 79, 413, 10.1111/tpj.12567
Kim, 2015, Regulation of plant growth and development by the GROWTH-REGULATING FACTOR and GRF-INTERACTING FACTOR duo, J. Exp. Bot., 66, 6093, 10.1093/jxb/erv349
Omidbakhshfard, 2015, Growth-regulating factors (GRFs): a small transcription factor family with important functions in plant biology, Mol. Plant, 8, 998, 10.1016/j.molp.2015.01.013
Liu, 2014, Synchronization of developmental processes and defense signaling by growth regulating transcription factors, PLoS One, 9, e98477, 10.1371/journal.pone.0098477
Soto-Suarez, 2017, The Arabidopsis miR396 mediates pathogen-associated molecular pattern- triggered immune responses against fungal pathogens, Sci. Rep., 7, 44898, 10.1038/srep44898
Piya, 2020, A role for Arabidopsis growth-regulating factors 1 and 3 in growth-stress antagonism, J. Exp. Bot., 71, 1402, 10.1093/jxb/erz502
Karlova, 2013, Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis, J. Exp. Bot., 64, 1863, 10.1093/jxb/ert049
Liu, 2009, Ectopic expression of miR396 suppresses GRF target gene expression and alters leaf growth in Arabidopsis, Physiol. Plant., 136, 223, 10.1111/j.1399-3054.2009.01229.x
Zhou, 2010, Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa, J. Exp. Bot., 61, 4157, 10.1093/jxb/erq237
Pagliarani, 2017, The accumulation of miRNAs differentially modulated by drought stress is affected by grafting in Grapevine, Plant Physiol., 173, 2180, 10.1104/pp.16.01119
Gao, 2010, Over-expression of osa-MIR396c decreases salt and alkali stress tolerance, Planta., 231, 991, 10.1007/s00425-010-1104-2
Liu, 2017, Tissue-specific regulation of Gma-miR396 family on coordinating development and low water availability responses, Front. Plant Sci., 8, 1112, 10.3389/fpls.2017.01112
Liu, 2017, Profiling of drought-responsive microRNA and mRNA in tomato using high- throughput sequencing, BMC Genomics, 18, 481, 10.1186/s12864-017-3869-1
Liu, 2018, Identification of drought-responsive microRNAs in tomato using high-throughput sequencing, Funct. Integr. Genomics, 18, 67, 10.1007/s10142-017-0575-7
Candar-Cakir, 2016, Small RNA and degradome deep sequencing reveals drought-and tissue-specific micrornas and their important roles in drought-sensitive and drought-tolerant tomato genotypes, Plant Biotechnol. J., 14, 1727, 10.1111/pbi.12533
Wittmann, 2015, Development of a tomato plant resistant to Clavibacter michiganensis using the endolysin gene of bacteriophage CMP1 as a transgene, Plant Pathol., 65, 496, 10.1111/ppa.12417
Todesco, 2010, A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana, PLoS Genet., 6, e1001031, 10.1371/journal.pgen.1001031
Fracasso, 2017, Real-time determination of photosynthesis, transpiration, water-use efficiency and gene expression of two Sorghum bicolor (Moench) genotypes subjected to dry-down, Front. Plant Sci., 8, 932, 10.3389/fpls.2017.00932
Long, 1985, Measurement of CO2 assimilation by plants in the field and the laboratory, 62
Fracasso, 2016, Drought tolerance strategies highlighted by two Sorghum bicolor races in a dry-down experiment, J. Plant Physiol., 190, 1, 10.1016/j.jplph.2015.10.009
Casadebaig, 2008, Thresholds for leaf expansion and transpiration response to soil water deficit in a range of sunflower genotypes, Eur. J. Agron., 28, 646, 10.1016/j.eja.2008.02.001
Fracasso, 2016, Drought stress tolerance strategies revealed by RNA-Seq in two sorghum genotypes with contrasting WUE, BMC Plant Biol., 16, 115, 10.1186/s12870-016-0800-x
Hopper, 2014, A rapid dehydration leaf assay reveals stomatal response differences in grapevine genotypes, Hortic. Res., 1, 2, 10.1038/hortres.2014.2
McElwain, 2016, Using modern plant trait relationships between observed and theoretical maximum stomatal conductance and vein density to examine patterns of plant macroevolution, New Phytol., 209, 94, 10.1111/nph.13579
Shi, 2005, Facile means for quantifying microRNA expression by real-time PCR, Biotechniques., 39, 519, 10.2144/000112010
Iovieno, 2016, Transcriptomic changes drive physiological responses to progressive drought stress and rehydration in tomato, Front. Plant Sci., 7, 371, 10.3389/fpls.2016.00371
Kissoudis, 2016, Responses to combined abiotic and biotic stress in tomato are governed by stress intensity and resistance mechanism, J Exp Bot., 67, 5119, 10.1093/jxb/erw285
Wang, 2016, GSP: a web-based platform for designing genome-specific primers in polyploids, Bioinformatics., 32, 2382, 10.1093/bioinformatics/btw134
Vinale, 2010, Secondary metabolites produced by a root-inhabiting sterile fungus antagonistic towards pathogenic fungi, Lett. Appl. Microbiol., 50, 380, 10.1111/j.1472-765X.2010.02803.x
Vinale, 2017, Secondary metabolites from the endophytic fungus Talaromyces pinophilus, Nat. Prod. Res., 31, 1778, 10.1080/14786419.2017.1290624
Vinale, 2016, Cremenolide, a new antifungal, 10-member lactone from Trichoderma cremeum with plant growth promotion activity, Nat. Prod. Res., 30, 2575, 10.1080/14786419.2015.1131985
Chitarra, 2016, Insights on the impact of arbuscular mycorrhizal symbiosis on tomato tolerance to water stress, Plant Physiol., 171, 1009
Cao, 2016, Regulations on growth and development in tomato cotyledon, flower and fruit via destruction of miR396 with short tandem target mimic, Plant Sci., 247, 1, 10.1016/j.plantsci.2016.02.012
Khatun, 2017, Molecular characterization and expression profiling of tomato GRF transcription factor family genes in response to abiotic stresses and phytohormones, Int. J. Mol. Sci., 18, 10.3390/ijms18051056
Palatnik, 2003, Control of leaf morphogenesis by microRNAs, Nature., 425, 257, 10.1038/nature01958
Li, 2018, A tomato ERF transcription factor, SlERF84, confers enhanced tolerance to drought and salt stress but negatively regulates immunity against Pseudomonas syringae pv. Tomato DC3000, Plant Physiol. Biochem., 132, 683, 10.1016/j.plaphy.2018.08.022
Franks, 2015, Increasing water-use efficiency directly through genetic manipulation of stomatal density, New Phytol., 207, 188, 10.1111/nph.13347
Hughes, 2017, Reducing stomatal density in barley improves drought tolerance without impacting on yield, Plant Physiol., 174, 776, 10.1104/pp.16.01844
Caine, 2019, Rice with reduced stomatal density conserves water and has improved drought tolerance under future climate conditions, New Phytol., 221, 371, 10.1111/nph.15344
Lawson, 2014, Stomatal size, speed, and responsiveness impact on photosynthesis and water use efficiency, Plant Physiol., 164, 1556, 10.1104/pp.114.237107
Drake, 2013, Smaller, faster stomata: scaling of stomatal size, rate of response, and stomatal conductance, J. Exp. Bot., 64, 495, 10.1093/jxb/ers347
Ouyang, 2017, Stomatal conductance, mesophyll conductance, and transpiration efficiency in relation to leaf anatomy in rice and wheat genotypes under drought, J. Exp. Bot., 68, 5191, 10.1093/jxb/erx314
Vercruyssen, 2014, ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development, Plant Cell, 26, 210, 10.1105/tpc.113.115907
Godoy, 1990, A tomato cDNA inducible by salt stress and abscisic acid: nucleotide sequence and expression pattern, Plant Mol. Biol., 15, 695, 10.1007/BF00016120
Munoz-Mayor, 2012, Overexpression of dehydrin tas14 gene improves the osmotic stress imposed by drought and salinity in tomato, J. Plant Physiol., 169, 459, 10.1016/j.jplph.2011.11.018
Harrak, 2001, Isolation and characterization of a gene encoding a drought-induced cysteine protease in tomato (Lycopersicon esculentum), Genome., 44, 368, 10.1139/g01-007
Koenig, 2013, Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato, Proc Natl Acad Sci U S A., 110, E2655, 10.1073/pnas.1309606110
Egea, 2018, The drought-tolerant Solanum pennellii regulates leaf water loss and induces genes involved in amino acid and ethylene/jasmonate metabolism under dehydration, Sci. Rep., 8, 2791, 10.1038/s41598-018-21187-2
Chen, 2017, MicroRNA396a-5p and -3p induce tomato disease susceptibility by suppressing target genes and upregulating salicylic acid, Plant Sci., 265, 177, 10.1016/j.plantsci.2017.10.004
Ramesh, 2015, GABA signalling modulates plant growth by directly regulating the activity of plant-specific anion transporters, Nat. Commun., 6, 7879, 10.1038/ncomms8879
Ramesh, 2018, Aluminum-activated malate transporters can facilitate GABA transport, Plant Cell, 30, 1147, 10.1105/tpc.17.00864
