Improving ITS sequence data for identification of plant pathogenic fungi

Springer Science and Business Media LLC - 2014
R. Henrik Nilsson1, Kevin D. Hyde2, Julia Pawłowska3, Martin Ryberg4, Leho Tedersoo5, Anders Bjørnsgard6, Siti Aisyah Alias7, Artur Alves8, Cajsa Lisa Anderson1, Alexandre Antonelli1, A. Elizabeth Arnold9, Barbara Doreen Bahnmann10, Mohammad Bahram5, Johan Bengtsson‐Palme11, Anna Berlin12, Sara Branco13, Putarak Chomnunti14, Asha J. Dissanayake14, Rein Drenkhan15, Hanna Friberg12, Tobias Guldberg Frøslev16, Bettina Halwachs17, Martin Hartmann18, B. Henricot19, Ruvishika S. Jayawardena14, Ari Jumpponen20, Håvard Kauserud6, Sonja Koskela21, Tomasz Kulik22, Kare Liimatainen23, Björn D. Lindahl12, Daniel L. Lindner24, Jian‐Kui Liu14, Sajeewa S. N. Maharachchikumbura14, Dimuthu S. Manamgoda14, Svante Martinsson1, Maria Alice Neves25, Tuula Niskanen23, Stephan Nylinder26, Olinto Liparini Pereira27, Danilo Batista Pinho27, Teresita M. Porter28, Valentin Queloz29, Taavi Riit5, Marisol Sánchez-García30, Filipe Sousa1, Emil Stefańczyk31, Mariusz Tadych32, Susumu Takamatsu33, Qing Tian14, Dhanushka Udayanga14, Martin Unterseher34, Zheng Wang35, Saowanee Wikee14, Jiye Yan36, Ellen Larsson1, Karl ­Henrik Larsson37, Urmas Kõljalg38, Kessy Abarenkov38
1Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden
2Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
3Department of Plant Systematics and Geography, Faculty of Biology, University of Warsaw, Al. Ujazdowskie 4, 00-478, Warsaw, Poland
4Department of Organismal Biology, Uppsala University, Norbyvägen 18D, 75236, Uppsala, Sweden
5Institute of Ecology and Earth Sciences, University of Tartu, Lai 40, Tartu 51005, Estonia
6Microbial Evolution Research Group, University of Oslo, Blindernveien 31, 0371, Oslo, Norway
7Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia
8Department of Biology, CESAM, University of Aveiro, 3810-193 Aveiro, Portugal
9School of Plant Sciences, The University of Arizona, 1140 E South Campus Drive, Forbes 303, Tucson, AZ, 85721, USA
10Laboratory of Environmental Microbiology, Institute of Microbiology ASCR, Vídeňská 1083, 14220, Prague 4, Czech Republic
11Department of Infectious Diseases, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Guldhedsgatan 10, 413 46, Göteborg, Sweden
12Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden
13University of California at Berkeley, 321 Koshland Hall University of California, Berkeley, CA, 94720-3102, USA
14School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
15Institute of Forestry and Rural Engineering, Estonian University of Life Sciences, Kreutzwaldi 5, 51014 Tartu, Estonia
16Natural History Museum of Denmark, Øster Voldgade 5-7, 1350 København K, Denmark
17Institute for Genomics and Bioinformatics, Graz University of Technology, 8010, Graz, Austria
18Forest Soils and Biogeochemistry, Swiss Federal Research Institute WSL, Zuercherstrasse 111, 8903, Birmensdorf, Switzerland
19Plant Pathology, The Royal Horticultural Society, Wisley, Woking, Surrey, GU23 6QB, UK
20Division of Biology, Kansas State University, Manhattan, KS 66506, USA
21Metapopulation Research Group, Department of Biosciences, University of Helsinki, PO Box 65, 00014, Helsinki, Finland
22Department of Diagnostics and Plant Pathophysiology, University of Warmia and Mazury in Olsztyn, Plac Lodzki 5, Olsztyn 10-957, Poland
23Plant Biology, Department of Biosciences, University of Helsinki, P.O. Box 65, 00014, Helsinki, Finland
24US Forest Service, Northern Research Station, Center for Forest Mycology Research, One Gifford Pinchot Drive, Madison, WI, USA
25Departamento Botânica, PPG Biologia de Fungos, Algas e Plantas, Universidade Federal de Santa Catarina, Florianópolis, SC, Brazil
26Department of Botany, Swedish Natural History Museum, Svante Arrhenius väg 7, 10405, Stockholm, Sweden
27Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
28Department of Biology, McMaster University, Hamilton, ON L8S 4K1, Canada
29ETH Zürich, Institute for Integrative Biology, CHN G 68.3, Universitätsstrasse 16, 8092, Zürich, Switzerland
30Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996-1610, USA
31Plant Breeding and Acclimatization Institute-National Research Institute, Młochów Research Centre, Platanowa 19, 05831, Młochów, Poland
32Department of Plant Biology and Pathology, School of Environmental and Biological Sciences, Rutgers, The State University of New Jersey, 59 Dudley Rd., New Brunswick, NJ, 08901, USA
33Laboratory of Plant Pathology, Faculty of Bioresources, Mie University, 1577 Kurima-Machiya, Tsu-city, 514-8507, Japan
34Institute of Botany and Landscape Ecology, Ernst-Moritz-Arndt University, Soldmannstr. 15, 17487, Greifswald, Germany
35Biostatistics Department, Yale School of Public Health, New Haven, CT, 06520, USA
36Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
37Natural History Museum, P.O. Box 1172, Blindern, 0318, Oslo, Norway
38Natural History Museum, University of Tartu, Vanemuise 46, Tartu, 51014, Estonia

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